| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is ag84 [H]
Identifier: 158316846
GI number: 158316846
Start: 6092303
End: 6093355
Strand: Reverse
Name: ag84 [H]
Synonym: Franean1_5089
Alternate gene names: 158316846
Gene position: 6093355-6092303 (Counterclockwise)
Preceding gene: 158316847
Following gene: 158316844
Centisome position: 67.84
GC content: 76.64
Gene sequence:
>1053_bases GTGGCGCTGACACCGCAGGATGTTCAGAACAAGGTCTTCAGCCCGACGAGGTTCCGCACGGGCTACAACGAGGACGAGGT CGACACCTTCCTTGATGAGGTCGAGGCCGAGCTGACGCGACTGCTCGACGAGAGCAGCGACCTGCGCAGGCAGCTCGACG AGGCCCGCCGGTCCGGCGGTGGCGGTCCCGGTGTCCCGGCACAGATCCTCGACGAGAACCAGCAGCTGCGCCGCCAGCTC GAGGAGTCCCGCCGGCAGCTGGCGCAGGCGCAGGCGCAGGCCGCGCAGGCGGCCCAGGCCGCCCGCGAGCGGCCCCCGAT GCCCGCCGGCCCGCCTGGCGCGGGTCCGGGTGGTCCGGGTGGACCTGGCGCGCCCGGTGGTCCGCCGGTGTCCGGTGGCC CGACGGCGGTCATGCCCGCGCTGGTCGGCGGGGGCGGTCAGGCCCCGGCCCGCACGGGCCCGGGAGCCGGTGGCCAGAAC GACGCCGACATCGAGCAGCGCGTCGCGCGGACCCTCGTGCTCGCCCAGCGGACCGCCGACGAGGCGCTGCGGGAGGCCCG CGCCGAGTCGGAGCGGGCCCGCCGCGAGGCGCGCGCCGACGCCGACCGGATCCTCGGTGAGGCCCGGGCGCACGTCGCCG AGCAGCTCGGTGGGCTCGAGGACGACAAGCGCCGCCTCGAAGGCCAGGTCGAGCAGCTCCGCGCCTTCGAGCGTGAGTAC CGCACGCGGCTGCGCGCCTACCTGGAGATGCAGCTGCGTGACCTCGACGGCATGCCCACACAGCCGGCCGTCGGGCCGGG TATGCCGTCGCGCCCCGGGCTCAACCCCGGCGCGCCGACACCCACCCCGGCCCCCGCGAGTGTCGGCATGGCGCAGACCG GTGGCGGCCAGCCGCCCCAGCCGCCCCAGCAGCCCCAGCACGTGGGAGCGCAGGCGTTCCAGGGCGGCCCGCAGATGGGC GCCGCGACGCTGGCGCGGGAGAGCAACGGCCACGGCGGGCGCCCGGATCTCGACCCGGGCCGCCGCGACGCTCCGGGCAT GCAGGAGTTCTAG
Upstream 100 bases:
>100_bases CTGTGACTGAGGTCGTGTGCACACCGCGAGTGCGGGCAAGGCAGACTGCCCGCAGACCGCCCTCTCTTCGGGGAGCGGCG ATGCCGCACGAGGAGGCAAC
Downstream 100 bases:
>100_bases GCCAGCATGGTGATGATCAGCGGCGCCCTGGTGGTGATCGCCGCGGTGCTGGCCGTGCTCGGCCTGTTCGGCGCGGCCAC CTGGTCGTACACGTCACTGA
Product: DivIVA family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MALTPQDVQNKVFSPTRFRTGYNEDEVDTFLDEVEAELTRLLDESSDLRRQLDEARRSGGGGPGVPAQILDENQQLRRQL EESRRQLAQAQAQAAQAAQAARERPPMPAGPPGAGPGGPGGPGAPGGPPVSGGPTAVMPALVGGGGQAPARTGPGAGGQN DADIEQRVARTLVLAQRTADEALREARAESERARREARADADRILGEARAHVAEQLGGLEDDKRRLEGQVEQLRAFEREY RTRLRAYLEMQLRDLDGMPTQPAVGPGMPSRPGLNPGAPTPTPAPASVGMAQTGGGQPPQPPQQPQHVGAQAFQGGPQMG AATLARESNGHGGRPDLDPGRRDAPGMQEF
Sequences:
>Translated_350_residues MALTPQDVQNKVFSPTRFRTGYNEDEVDTFLDEVEAELTRLLDESSDLRRQLDEARRSGGGGPGVPAQILDENQQLRRQL EESRRQLAQAQAQAAQAAQAARERPPMPAGPPGAGPGGPGGPGAPGGPPVSGGPTAVMPALVGGGGQAPARTGPGAGGQN DADIEQRVARTLVLAQRTADEALREARAESERARREARADADRILGEARAHVAEQLGGLEDDKRRLEGQVEQLRAFEREY RTRLRAYLEMQLRDLDGMPTQPAVGPGMPSRPGLNPGAPTPTPAPASVGMAQTGGGQPPQPPQQPQHVGAQAFQGGPQMG AATLARESNGHGGRPDLDPGRRDAPGMQEF >Mature_349_residues ALTPQDVQNKVFSPTRFRTGYNEDEVDTFLDEVEAELTRLLDESSDLRRQLDEARRSGGGGPGVPAQILDENQQLRRQLE ESRRQLAQAQAQAAQAAQAARERPPMPAGPPGAGPGGPGGPGAPGGPPVSGGPTAVMPALVGGGGQAPARTGPGAGGQND ADIEQRVARTLVLAQRTADEALREARAESERARREARADADRILGEARAHVAEQLGGLEDDKRRLEGQVEQLRAFEREYR TRLRAYLEMQLRDLDGMPTQPAVGPGMPSRPGLNPGAPTPTPAPASVGMAQTGGGQPPQPPQQPQHVGAQAFQGGPQMGA ATLARESNGHGGRPDLDPGRRDAPGMQEF
Specific function: Unknown
COG id: COG3599
COG function: function code D; Cell division initiation protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007793 - InterPro: IPR019933 [H]
Pfam domain/function: PF05103 DivIVA [H]
EC number: NA
Molecular weight: Translated: 36857; Mature: 36726
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALTPQDVQNKVFSPTRFRTGYNEDEVDTFLDEVEAELTRLLDESSDLRRQLDEARRSGG CCCCHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC GGPGVPAQILDENQQLRRQLEESRRQLAQAQAQAAQAAQAARERPPMPAGPPGAGPGGPG CCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC GPGAPGGPPVSGGPTAVMPALVGGGGQAPARTGPGAGGQNDADIEQRVARTLVLAQRTAD CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH EALREARAESERARREARADADRILGEARAHVAEQLGGLEDDKRRLEGQVEQLRAFEREY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH RTRLRAYLEMQLRDLDGMPTQPAVGPGMPSRPGLNPGAPTPTPAPASVGMAQTGGGQPPQ HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCC PPQQPQHVGAQAFQGGPQMGAATLARESNGHGGRPDLDPGRRDAPGMQEF CCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ALTPQDVQNKVFSPTRFRTGYNEDEVDTFLDEVEAELTRLLDESSDLRRQLDEARRSGG CCCHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC GGPGVPAQILDENQQLRRQLEESRRQLAQAQAQAAQAAQAARERPPMPAGPPGAGPGGPG CCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC GPGAPGGPPVSGGPTAVMPALVGGGGQAPARTGPGAGGQNDADIEQRVARTLVLAQRTAD CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH EALREARAESERARREARADADRILGEARAHVAEQLGGLEDDKRRLEGQVEQLRAFEREY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH RTRLRAYLEMQLRDLDGMPTQPAVGPGMPSRPGLNPGAPTPTPAPASVGMAQTGGGQPPQ HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCC PPQQPQHVGAQAFQGGPQMGAATLARESNGHGGRPDLDPGRRDAPGMQEF CCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]