Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158316776

Identifier: 158316776

GI number: 158316776

Start: 6010431

End: 6010685

Strand: Reverse

Name: 158316776

Synonym: Franean1_5015

Alternate gene names: NA

Gene position: 6010685-6010431 (Counterclockwise)

Preceding gene: 158316777

Following gene: 158316775

Centisome position: 66.92

GC content: 74.9

Gene sequence:

>255_bases
ATGGTGCTCGCCGCCCGCTGGCCGGCGACCGAAGGGCTCTCCGGCGACCTCACCCCGTTGTCCATCGCCGCGGCCGTGAG
CACAGTACCGGAGAAGGACCTGCCGGGTGCGAGCGGACTGGGGTTCCGCCGCATCGGCGAGGCCGACCCGGCCACGCCCG
CCGTCCGCGTCCGCAGCGGACTGGTGACGACCCTCGACGACGAGGGCCAGCCCCTCGGGCGCGAGGCGGGCGGTTTCCCA
CCGACCGAGGACTGA

Upstream 100 bases:

>100_bases
GCCCGATGTGAACAACCCGTAGACGCGCCTGCTCGACGCCGCCGCGACCACCCACAGCGAGGACATCGAGACCAGCAGGC
CCGGGACGACGGCCCCGGTC

Downstream 100 bases:

>100_bases
GCCGACCGACCGGACCGAGGGCGGCCGCACCGGTCGCCGGGCCCGATCCTCCCGACGCCCGCCCCGGTCGCCGCCTGCTC
GCGAGCTGATCCGGTCGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: Branched Chain Amino Acid ABC Transporter

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MVLAARWPATEGLSGDLTPLSIAAAVSTVPEKDLPGASGLGFRRIGEADPATPAVRVRSGLVTTLDDEGQPLGREAGGFP
PTED

Sequences:

>Translated_84_residues
MVLAARWPATEGLSGDLTPLSIAAAVSTVPEKDLPGASGLGFRRIGEADPATPAVRVRSGLVTTLDDEGQPLGREAGGFP
PTED
>Mature_84_residues
MVLAARWPATEGLSGDLTPLSIAAAVSTVPEKDLPGASGLGFRRIGEADPATPAVRVRSGLVTTLDDEGQPLGREAGGFP
PTED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8555; Mature: 8555

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLAARWPATEGLSGDLTPLSIAAAVSTVPEKDLPGASGLGFRRIGEADPATPAVRVRSG
CEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
LVTTLDDEGQPLGREAGGFPPTED
EEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVLAARWPATEGLSGDLTPLSIAAAVSTVPEKDLPGASGLGFRRIGEADPATPAVRVRSG
CEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
LVTTLDDEGQPLGREAGGFPPTED
EEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA