| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316777
Identifier: 158316777
GI number: 158316777
Start: 6012277
End: 6012597
Strand: Reverse
Name: 158316777
Synonym: Franean1_5016
Alternate gene names: NA
Gene position: 6012597-6012277 (Counterclockwise)
Preceding gene: 158316781
Following gene: 158316776
Centisome position: 66.94
GC content: 71.96
Gene sequence:
>321_bases ATGGCAGGGAGCGAGGACGAGCTGACCGCCCTGGTGGCGGCGGTCAACAGTGCGCGGGAGCGCGAGGACGAGGTGCGCCG AGTGGCGCACCTGGACTACTGCCGTGCGATCCGCGAGCTCGTCGGGTACGAGGAGCGGGCGCACGGACAGCGTGGCGCCA AGTCCCGCGCCGCCCGGCATCTCGGCATGAGCGCCCAGAATGTCGGGATCATGCTCGACCAGCTCCATGAGGCTGAGACC GGCGCCCCGCGGCCGAAGCAGGTGCGGTCGGCGCGCGGGGACGAGTCGGTAACGGCGGGGCATGCGGAGGTGGGCTCATG A
Upstream 100 bases:
>100_bases TTCGCTTGGCCGATCCGACTTCCCAACTGTAAATTATCATGTGAAGATTCATCAAATGGTGATGTGAAGATCTGTCACAT GACTATGTTAAGATCGGCGA
Downstream 100 bases:
>100_bases CGCCGCACGTTGACGCCGAGACGCAGGAGGAGGGCTGGCCGAAGGGCGAGCCGATCGAGGTGCTGGACTGATCGAGGGCG AGTCTCCGCTCGCTCATGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MAGSEDELTALVAAVNSAREREDEVRRVAHLDYCRAIRELVGYEERAHGQRGAKSRAARHLGMSAQNVGIMLDQLHEAET GAPRPKQVRSARGDESVTAGHAEVGS
Sequences:
>Translated_106_residues MAGSEDELTALVAAVNSAREREDEVRRVAHLDYCRAIRELVGYEERAHGQRGAKSRAARHLGMSAQNVGIMLDQLHEAET GAPRPKQVRSARGDESVTAGHAEVGS >Mature_105_residues AGSEDELTALVAAVNSAREREDEVRRVAHLDYCRAIRELVGYEERAHGQRGAKSRAARHLGMSAQNVGIMLDQLHEAETG APRPKQVRSARGDESVTAGHAEVGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11476; Mature: 11345
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGSEDELTALVAAVNSAREREDEVRRVAHLDYCRAIRELVGYEERAHGQRGAKSRAARH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHH LGMSAQNVGIMLDQLHEAETGAPRPKQVRSARGDESVTAGHAEVGS HCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure AGSEDELTALVAAVNSAREREDEVRRVAHLDYCRAIRELVGYEERAHGQRGAKSRAARH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHH LGMSAQNVGIMLDQLHEAETGAPRPKQVRSARGDESVTAGHAEVGS HCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA