| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316732
Identifier: 158316732
GI number: 158316732
Start: 5965191
End: 5965997
Strand: Reverse
Name: 158316732
Synonym: Franean1_4970
Alternate gene names: NA
Gene position: 5965997-5965191 (Counterclockwise)
Preceding gene: 158316738
Following gene: 158316727
Centisome position: 66.42
GC content: 68.9
Gene sequence:
>807_bases ATGATCGTCGATCCTCGTGTGGGTTCGACTCGCAACTGCGTCGTGCGTGCGCTCGTCGAGCTGATGGTGGGCACATGCCC GGACCGAGTGCTGCGTGTCGCGATCGACGGTCCGGACGCGGCCGGCAAGACGACGCTGGCCGACGATCTTGCCGGCACCC TCGCTGACCGAGGTCGGCCTGTCATCCGGGCCAGCGTCGATGGCTTCCACCAGCCTCGGCTCATACGCCGTGGGTCGCTG TCCCCGGATGGCTACTTCTTCGACGCATTCGACTACACCGCGCTACGGCATCTTCTGCTCGACCCGTTAAGCCCGGACGG CGATCGGCGCTACCGCGCAGCCGCGTTCGACCATCTCCGCGATGCCCCGCTTGACAGCCCCACCCACGAGGCGGTGAGCG ATGCGGTGCTCATCGTCGACGGTGTCTTCCTCCTCCGGGACGAGCTGCGCGATTATTGGGATCTCAGCGTGTTCCTCCAG ATCAGCCCTGCCGAATCGCTGCGCCGTGCGATGCGCCGCGACGTCGCCCTGTTCGGTTCACCCGACGTGGTCCGCGAACG CTACGAGGCGCGCTACCTGCCCGGCCAGGCGCTTTACCAGGCTTCCGCCGCGCCCGGGGAACGCGCCGACGTGCTGATCG ACCTGGCTGCCGGACGGCCGGCTGCTGATCGTCTCGTCCGCGGCCGGGCTGCTGCTGCGGCGGGAGCCTGCGGACCGTCG AGCTGGACCGTGGCTGCTTCGCCTGCGCGCTCGGCGGTCCCGACGGGACGGAGCTGTTCATGGTGGCCGCCGAATGGCAG GGCATGA
Upstream 100 bases:
>100_bases CGCAGGGATTCCATCCGCCCCGCGTTCGGTGGATCCGTACGTCCTCGGCCGTAGCGCGGCGATCGTGATCTCCGGTGGGG TGCTGCTACTGTCACGTCGA
Downstream 100 bases:
>100_bases CCGAAGCCGAGACGGTCTCCCCGGGCTCCGGGCAGGTGCTCGTCACCCAGGTCGACGTGCCAGGGGCGGGCTGGCCGTGA CACAGCTCGCCGTGCGTCCG
Product: uridine kinase
Products: ADP; UMP
Alternate protein names: Phosphoribulokinase / Uridine Kinase Family; Kinase; Phosphoribulokinase/Uridine Kinase; Pantothenate Kinase Protein
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MIVDPRVGSTRNCVVRALVELMVGTCPDRVLRVAIDGPDAAGKTTLADDLAGTLADRGRPVIRASVDGFHQPRLIRRGSL SPDGYFFDAFDYTALRHLLLDPLSPDGDRRYRAAAFDHLRDAPLDSPTHEAVSDAVLIVDGVFLLRDELRDYWDLSVFLQ ISPAESLRRAMRRDVALFGSPDVVRERYEARYLPGQALYQASAAPGERADVLIDLAAGRPAADRLVRGRAAAAAGACGPS SWTVAASPARSAVPTGRSCSWWPPNGRA
Sequences:
>Translated_268_residues MIVDPRVGSTRNCVVRALVELMVGTCPDRVLRVAIDGPDAAGKTTLADDLAGTLADRGRPVIRASVDGFHQPRLIRRGSL SPDGYFFDAFDYTALRHLLLDPLSPDGDRRYRAAAFDHLRDAPLDSPTHEAVSDAVLIVDGVFLLRDELRDYWDLSVFLQ ISPAESLRRAMRRDVALFGSPDVVRERYEARYLPGQALYQASAAPGERADVLIDLAAGRPAADRLVRGRAAAAAGACGPS SWTVAASPARSAVPTGRSCSWWPPNGRA >Mature_268_residues MIVDPRVGSTRNCVVRALVELMVGTCPDRVLRVAIDGPDAAGKTTLADDLAGTLADRGRPVIRASVDGFHQPRLIRRGSL SPDGYFFDAFDYTALRHLLLDPLSPDGDRRYRAAAFDHLRDAPLDSPTHEAVSDAVLIVDGVFLLRDELRDYWDLSVFLQ ISPAESLRRAMRRDVALFGSPDVVRERYEARYLPGQALYQASAAPGERADVLIDLAAGRPAADRLVRGRAAAAAGACGPS SWTVAASPARSAVPTGRSCSWWPPNGRA
Specific function: Unknown
COG id: COG0572
COG function: function code F; Uridine kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.1.48
Molecular weight: Translated: 29017; Mature: 29017
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVDPRVGSTRNCVVRALVELMVGTCPDRVLRVAIDGPDAAGKTTLADDLAGTLADRGRP CCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCC VIRASVDGFHQPRLIRRGSLSPDGYFFDAFDYTALRHLLLDPLSPDGDRRYRAAAFDHLR EEEECCCCCCCCHHHHCCCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH DAPLDSPTHEAVSDAVLIVDGVFLLRDELRDYWDLSVFLQISPAESLRRAMRRDVALFGS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCHHHHHHHHHHCEECCCC PDVVRERYEARYLPGQALYQASAAPGERADVLIDLAAGRPAADRLVRGRAAAAAGACGPS HHHHHHHHHHHCCCHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCC SWTVAASPARSAVPTGRSCSWWPPNGRA CCEEEECCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIVDPRVGSTRNCVVRALVELMVGTCPDRVLRVAIDGPDAAGKTTLADDLAGTLADRGRP CCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCC VIRASVDGFHQPRLIRRGSLSPDGYFFDAFDYTALRHLLLDPLSPDGDRRYRAAAFDHLR EEEECCCCCCCCHHHHCCCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH DAPLDSPTHEAVSDAVLIVDGVFLLRDELRDYWDLSVFLQISPAESLRRAMRRDVALFGS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCHHHHHHHHHHCEECCCC PDVVRERYEARYLPGQALYQASAAPGERADVLIDLAAGRPAADRLVRGRAAAAAGACGPS HHHHHHHHHHHCCCHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCC SWTVAASPARSAVPTGRSCSWWPPNGRA CCEEEECCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; uridine
Specific reaction: ATP + uridine = ADP + UMP
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA