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The map label for this gene is yidY [C]

Identifier: 158316738

GI number: 158316738

Start: 5970385

End: 5971629

Strand: Reverse

Name: yidY [C]

Synonym: Franean1_4976

Alternate gene names: 158316738

Gene position: 5971629-5970385 (Counterclockwise)

Preceding gene: 158316742

Following gene: 158316732

Centisome position: 66.48

GC content: 73.9

Gene sequence:

>1245_bases
GTGGGGTTCGTCCTCGCGACGTACGCCTTCGTCGTCACCATGCTCGGCACCACCCTGCCGACGCCGATCTACCCGCTCTA
CCGTGAGCGGTTCGGTTTCTCCCAGCTCATGGTCACCGTGGTCTTCGCGACCTACGCCGTCGGCGTGATCGCGGCCCTGC
TGCTGTTCGGACGGCTCTCCGACCAGGTCGGCCGCCGCCATGCGCTGCTGCCCGGCCTGCTCGCCTCGGCCGCGAGCGCC
GCGGTCTTCCTGCTGGCGGACAACGTCGGCGTCCTGCTCGTCGGTCGGGTGCTCTCCGGCCTGTCCGCGGGCGTGTTCAC
CGGGACGGCCACCGCGACGCTCCTCGACCTCGCGCCACCGCACCGGCGGGGACGCGCCACCCTGGTCGCCACCATCGCCA
ACATGGGCGGTCTGGGCTGTGGCCCGCTGCTGGCCGGCCTGCTCTCCCAGTACGCCCCCAACCCGCTGCGGCTGACCTTC
GTGGTCGATCTGGCGCTGCTCGTCCCGGCCGCGGTCGGCATCTGGCTGATGCCCGAGACCGTCGAGGTGACGGGCCCGGC
CCGGCTGCGCCCACAGCGCCCCCGGGTGCCACCGAGCGCCCGGTCGGTCTTCGTCGGCGTCGCGCTGGCTGCTTTCGCCG
GATTCGCCGTCCTCGGCCTCTACACGGCCGTGGCACCCGCCTTCCTGGGCGCCGTGCTGGATCCGCCGAACCGGGCCATC
ACCGGACTGGTCGTCTTCGCGGTCTTCGCCTCCTCCGCCTGCGGCCAGGCCTCGCTCGACGTCGTCACCCGCCGGCTCGC
CGCACCAGGACGTCCGCCCGAGCGCATCGGGCTCACCGTCGGCTGCGCCGGGCTGGTGCTGGGCATGGGCGTGCTCGCGC
TGGGCCTGGCGACGTCGTCGGTCGCCGGCCTCGTGATCGGTGGCGTGATCTCCGGAGCGTCCCAGGGGATCGCCTTCCGG
GCCGGCCTCGCCGCCGTGAACACAGCCTCCCCGGCCGACCGCCGCGCCGAGGCCGCCTCCGCCTTCTTCGTCGTCGCCTA
CGTGGCGCTCTCACTGCCGGTCGTCGGGGTCGGCCTGCTCGTCGAGCTGACGAGCCTGACCACCGCCGGCCTGGTGTTCG
CCGCGATCGTGGCCGTCCTGGCGATCGTCGTCCTGGCCCTGTTGCGCACGGGCGCCGGCACTGCAGCTGCTGGTGGTGCC
GCCGCTACCGACGGGGCGGTCCCGGTACCGGCGCGGGACCGGTAA

Upstream 100 bases:

>100_bases
CACGGGGACCACGGCGGACGCCGCCGCCCCGCCCACCCGCACGGCCCCGGTTCAGCCCCCAGCCGGCCGGGCCCGGCGGC
GCCCGTCGACCAGCCGCCGG

Downstream 100 bases:

>100_bases
AGGGCGGGCGGCGGCTCCGCTACCGCCCGATCGCGGCGTCGGCGGCGGCGATGTCCTTGTGGAAGCGCTTGTGTACCCGC
AGCTTCTCGCCGGTCGCCTC

Product: major facilitator transporter

Products: Proton [Cytoplasm]; drug [Periplasm] [C]

Alternate protein names: Facilitator Transporter; Multi-Drug Efflux Transporter; Facilitator Superfamily Transporter Permease; Facilitator Superfamily; Arabinose Efflux Permease Family Protein; Facilitator Superfamily Transporter; Drug Efflux Protein; Multidrug ABC Transporter; Multidrug Efflux Protein; Facilitator Superfamily Multidrug Efflux Transporter; Permease Of Facilitator Superfamily; Facilitator Family Transporter; Facilitator Superfamily Multidrug Resistance Protein

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MGFVLATYAFVVTMLGTTLPTPIYPLYRERFGFSQLMVTVVFATYAVGVIAALLLFGRLSDQVGRRHALLPGLLASAASA
AVFLLADNVGVLLVGRVLSGLSAGVFTGTATATLLDLAPPHRRGRATLVATIANMGGLGCGPLLAGLLSQYAPNPLRLTF
VVDLALLVPAAVGIWLMPETVEVTGPARLRPQRPRVPPSARSVFVGVALAAFAGFAVLGLYTAVAPAFLGAVLDPPNRAI
TGLVVFAVFASSACGQASLDVVTRRLAAPGRPPERIGLTVGCAGLVLGMGVLALGLATSSVAGLVIGGVISGASQGIAFR
AGLAAVNTASPADRRAEAASAFFVVAYVALSLPVVGVGLLVELTSLTTAGLVFAAIVAVLAIVVLALLRTGAGTAAAGGA
AATDGAVPVPARDR

Sequences:

>Translated_414_residues
MGFVLATYAFVVTMLGTTLPTPIYPLYRERFGFSQLMVTVVFATYAVGVIAALLLFGRLSDQVGRRHALLPGLLASAASA
AVFLLADNVGVLLVGRVLSGLSAGVFTGTATATLLDLAPPHRRGRATLVATIANMGGLGCGPLLAGLLSQYAPNPLRLTF
VVDLALLVPAAVGIWLMPETVEVTGPARLRPQRPRVPPSARSVFVGVALAAFAGFAVLGLYTAVAPAFLGAVLDPPNRAI
TGLVVFAVFASSACGQASLDVVTRRLAAPGRPPERIGLTVGCAGLVLGMGVLALGLATSSVAGLVIGGVISGASQGIAFR
AGLAAVNTASPADRRAEAASAFFVVAYVALSLPVVGVGLLVELTSLTTAGLVFAAIVAVLAIVVLALLRTGAGTAAAGGA
AATDGAVPVPARDR
>Mature_413_residues
GFVLATYAFVVTMLGTTLPTPIYPLYRERFGFSQLMVTVVFATYAVGVIAALLLFGRLSDQVGRRHALLPGLLASAASAA
VFLLADNVGVLLVGRVLSGLSAGVFTGTATATLLDLAPPHRRGRATLVATIANMGGLGCGPLLAGLLSQYAPNPLRLTFV
VDLALLVPAAVGIWLMPETVEVTGPARLRPQRPRVPPSARSVFVGVALAAFAGFAVLGLYTAVAPAFLGAVLDPPNRAIT
GLVVFAVFASSACGQASLDVVTRRLAAPGRPPERIGLTVGCAGLVLGMGVLALGLATSSVAGLVIGGVISGASQGIAFRA
GLAAVNTASPADRRAEAASAFFVVAYVALSLPVVGVGLLVELTSLTTAGLVFAAIVAVLAIVVLALLRTGAGTAAAGGAA
ATDGAVPVPARDR

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41548; Mature: 41416

Theoretical pI: Translated: 11.00; Mature: 11.00

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFVLATYAFVVTMLGTTLPTPIYPLYRERFGFSQLMVTVVFATYAVGVIAALLLFGRLS
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DQVGRRHALLPGLLASAASAAVFLLADNVGVLLVGRVLSGLSAGVFTGTATATLLDLAPP
HHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHCHHCCCHHHHHHHHCCCC
HRRGRATLVATIANMGGLGCGPLLAGLLSQYAPNPLRLTFVVDLALLVPAAVGIWLMPET
CCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHEECCCE
VEVTGPARLRPQRPRVPPSARSVFVGVALAAFAGFAVLGLYTAVAPAFLGAVLDPPNRAI
EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
TGLVVFAVFASSACGQASLDVVTRRLAAPGRPPERIGLTVGCAGLVLGMGVLALGLATSS
HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHCEEHHHHHHHHHHHHHHHHHHHHH
VAGLVIGGVISGASQGIAFRAGLAAVNTASPADRRAEAASAFFVVAYVALSLPVVGVGLL
HHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VELTSLTTAGLVFAAIVAVLAIVVLALLRTGAGTAAAGGAAATDGAVPVPARDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GFVLATYAFVVTMLGTTLPTPIYPLYRERFGFSQLMVTVVFATYAVGVIAALLLFGRLS
CHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DQVGRRHALLPGLLASAASAAVFLLADNVGVLLVGRVLSGLSAGVFTGTATATLLDLAPP
HHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHCHHCCCHHHHHHHHCCCC
HRRGRATLVATIANMGGLGCGPLLAGLLSQYAPNPLRLTFVVDLALLVPAAVGIWLMPET
CCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHEECCCE
VEVTGPARLRPQRPRVPPSARSVFVGVALAAFAGFAVLGLYTAVAPAFLGAVLDPPNRAI
EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
TGLVVFAVFASSACGQASLDVVTRRLAAPGRPPERIGLTVGCAGLVLGMGVLALGLATSS
HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHCEEHHHHHHHHHHHHHHHHHHHHH
VAGLVIGGVISGASQGIAFRAGLAAVNTASPADRRAEAASAFFVVAYVALSLPVVGVGLL
HHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VELTSLTTAGLVFAAIVAVLAIVVLALLRTGAGTAAAGGAAATDGAVPVPARDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]

Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA