Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158316638

Identifier: 158316638

GI number: 158316638

Start: 5848508

End: 5849674

Strand: Reverse

Name: 158316638

Synonym: Franean1_4875

Alternate gene names: NA

Gene position: 5849674-5848508 (Counterclockwise)

Preceding gene: 158316641

Following gene: 158316637

Centisome position: 65.13

GC content: 76.78

Gene sequence:

>1167_bases
ATGGATCTGACGGCGGAACACGGGCGCTGGCACCGCCTCCGAGCCGCGGCGGGCCGCGCCACCGGACCTGCGCGCCGCAC
GGCCGGACCTGCGCGCCGCACGGCGGTGACGGTCGTCGGGATGTCCGTCCTGCTCGGCCTCGTCGTCTGTCTCTACGGCT
CCACGGTCACCTCGGTGCGTCCCCGTGGGCTTCCCGTGGTCGTCGCCGGCCAGCCGCAGGGCGCGAAGGCCCTCACGGAG
GCGGTCGAACGGATGTCGCCGGGCGCCCTGCGTATCGGTGTCGTCCCGGACGCCGCCGCCGCCGACCGGGTGCTGCGCGA
CCGGAAGGCTTACGCCGCGTTCGTCATCACCGACGACGGGCTCGCGCTGCGCCTCGCGTCCGCGGCGAGCCCCGCCGTGG
CCGAGGCGCTGGTCCGCGGAATGTCGGTGACGTTTCCCGATCTGCGGATCCCCGTCGTCGACGTCGTCCCCAACGCCTCC
GCCGATCATCAGGGTGGCGGGGTGTCCGCCGGCTACCTGCCGCTGGTGCTGATCGCGGCGGCGGCGGGCGTGCTGCTGGC
GCGCGCCGCCCGGACGAGGCAGGCCCGTCTCGGTGGCCTCGTCGGCTTCATGGTGGCCGCCGGGGTGGCCGGCACCCTGG
CCCTCGGTGGGGGTCTCGACGTGCTGCCCGACACGTTCGGGAGCAGCGTGGTCGTCCTGGCGATGGTCGCCGGGGCCGTG
GTGGCACCCGTCCTCGGGCTGGGCGCGGTGGCCGGGGGGCGCGGGCTCGTCGCGGCTGTCGGCGTGACCGTGCTCGGCGC
GGCCCTCTCCGGCGCGTCGTCGGCGCCGGAGATGCTGCCGACGCCGTGGGGCGGCCTGGGTCAGCTGCTGCCGCCCGGAG
CGGGGGTGACCCTGCTGCGGTCCACCCTGTACTTCGATGGTGCCGGTGGCGGGCGTGGGGCGGCCGTCCTGGCGATCTGG
GCGGTCGCCGGGATCGCCCTGATCCTGCTCGGCCGGGAGCGCGCGGGCGGCGCCGGGACGATTCCGGCCGGGACGTCGGT
TCCGAGCGAAGCCACCGCCGCGCCGGCGGCGGCCGCGGTCGCCGCCGGGCTGGTCGTGCGCCCCCGGGAGGCCACAGCTG
AGACCAGCCCGAGCGTCTCCCCACGCGAAGGCGGGTTCCGAGCATAG

Upstream 100 bases:

>100_bases
CCGCCACCGCACCGTCGCACCGTGATCTGAGCGACGCTGCACGTCGCTCACCTTCAGTGTCTGAATGGCGACGGATCCCA
GTGATCGTAGTGGAGGGCCG

Downstream 100 bases:

>100_bases
GGTCGGTCTCGTGGATCGCCGCATCTTCGGGCTGGAGAACGAGTACGGCGTCACCTGCGTGTTCCGCGGGCAGCGAAGGC
TGTCGCCGGACGAGGTGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MDLTAEHGRWHRLRAAAGRATGPARRTAGPARRTAVTVVGMSVLLGLVVCLYGSTVTSVRPRGLPVVVAGQPQGAKALTE
AVERMSPGALRIGVVPDAAAADRVLRDRKAYAAFVITDDGLALRLASAASPAVAEALVRGMSVTFPDLRIPVVDVVPNAS
ADHQGGGVSAGYLPLVLIAAAAGVLLARAARTRQARLGGLVGFMVAAGVAGTLALGGGLDVLPDTFGSSVVVLAMVAGAV
VAPVLGLGAVAGGRGLVAAVGVTVLGAALSGASSAPEMLPTPWGGLGQLLPPGAGVTLLRSTLYFDGAGGGRGAAVLAIW
AVAGIALILLGRERAGGAGTIPAGTSVPSEATAAPAAAAVAAGLVVRPREATAETSPSVSPREGGFRA

Sequences:

>Translated_388_residues
MDLTAEHGRWHRLRAAAGRATGPARRTAGPARRTAVTVVGMSVLLGLVVCLYGSTVTSVRPRGLPVVVAGQPQGAKALTE
AVERMSPGALRIGVVPDAAAADRVLRDRKAYAAFVITDDGLALRLASAASPAVAEALVRGMSVTFPDLRIPVVDVVPNAS
ADHQGGGVSAGYLPLVLIAAAAGVLLARAARTRQARLGGLVGFMVAAGVAGTLALGGGLDVLPDTFGSSVVVLAMVAGAV
VAPVLGLGAVAGGRGLVAAVGVTVLGAALSGASSAPEMLPTPWGGLGQLLPPGAGVTLLRSTLYFDGAGGGRGAAVLAIW
AVAGIALILLGRERAGGAGTIPAGTSVPSEATAAPAAAAVAAGLVVRPREATAETSPSVSPREGGFRA
>Mature_388_residues
MDLTAEHGRWHRLRAAAGRATGPARRTAGPARRTAVTVVGMSVLLGLVVCLYGSTVTSVRPRGLPVVVAGQPQGAKALTE
AVERMSPGALRIGVVPDAAAADRVLRDRKAYAAFVITDDGLALRLASAASPAVAEALVRGMSVTFPDLRIPVVDVVPNAS
ADHQGGGVSAGYLPLVLIAAAAGVLLARAARTRQARLGGLVGFMVAAGVAGTLALGGGLDVLPDTFGSSVVVLAMVAGAV
VAPVLGLGAVAGGRGLVAAVGVTVLGAALSGASSAPEMLPTPWGGLGQLLPPGAGVTLLRSTLYFDGAGGGRGAAVLAIW
AVAGIALILLGRERAGGAGTIPAGTSVPSEATAAPAAAAVAAGLVVRPREATAETSPSVSPREGGFRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38045; Mature: 38045

Theoretical pI: Translated: 11.59; Mature: 11.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLTAEHGRWHRLRAAAGRATGPARRTAGPARRTAVTVVGMSVLLGLVVCLYGSTVTSVR
CCCCCCCCCHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC
PRGLPVVVAGQPQGAKALTEAVERMSPGALRIGVVPDAAAADRVLRDRKAYAAFVITDDG
CCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCHHEEEEEEECCC
LALRLASAASPAVAEALVRGMSVTFPDLRIPVVDVVPNASADHQGGGVSAGYLPLVLIAA
CEEEEECCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHH
AAGVLLARAARTRQARLGGLVGFMVAAGVAGTLALGGGLDVLPDTFGSSVVVLAMVAGAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
VAPVLGLGAVAGGRGLVAAVGVTVLGAALSGASSAPEMLPTPWGGLGQLLPPGAGVTLLR
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
STLYFDGAGGGRGAAVLAIWAVAGIALILLGRERAGGAGTIPAGTSVPSEATAAPAAAAV
HHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHH
AAGLVVRPREATAETSPSVSPREGGFRA
HHHHEECCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDLTAEHGRWHRLRAAAGRATGPARRTAGPARRTAVTVVGMSVLLGLVVCLYGSTVTSVR
CCCCCCCCCHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC
PRGLPVVVAGQPQGAKALTEAVERMSPGALRIGVVPDAAAADRVLRDRKAYAAFVITDDG
CCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCHHEEEEEEECCC
LALRLASAASPAVAEALVRGMSVTFPDLRIPVVDVVPNASADHQGGGVSAGYLPLVLIAA
CEEEEECCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHH
AAGVLLARAARTRQARLGGLVGFMVAAGVAGTLALGGGLDVLPDTFGSSVVVLAMVAGAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
VAPVLGLGAVAGGRGLVAAVGVTVLGAALSGASSAPEMLPTPWGGLGQLLPPGAGVTLLR
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
STLYFDGAGGGRGAAVLAIWAVAGIALILLGRERAGGAGTIPAGTSVPSEATAAPAAAAV
HHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHH
AAGLVVRPREATAETSPSVSPREGGFRA
HHHHEECCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA