| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is rifF [H]
Identifier: 158316599
GI number: 158316599
Start: 5777291
End: 5778097
Strand: Reverse
Name: rifF [H]
Synonym: Franean1_4835
Alternate gene names: 158316599
Gene position: 5778097-5777291 (Counterclockwise)
Preceding gene: 158316600
Following gene: 158316598
Centisome position: 64.33
GC content: 72.99
Gene sequence:
>807_bases GTGTTTGACGTCGAGGCGTACCTGAAGGCGCTCGACCACCGTGGCCCGGCCGACGCGAGCCCTGAGACGCTGCGCCGCCT GCACCACGCCCACCTGCGGACCGTGCCCTACGACAGCGAGCTGAACTCCACCCGCGGCACGGACCTGTGGAAGGGCGTCG ACATCGACGCCGACGCCGTGTTCGACGCGGTGGTCCTCGGCGGCCGTGGCGGGGTGTGTTACGAGCTCAACGGCCTGTTC CGGCGCCTGCTGGCCGAGCTCGGATTCGAGACCGGCGTGTACGCGGCGGCCATCCGGCAGGTCGACGGATCCTTCGGGCC GGACCTGGAGCACATCTTCACCTTCGTCCGCCTGGACGACGAGGTGCTCCTCGTCGACGTCGGCTTCGTGGGGCCGTCCT ACCTGGAGCCGCTGCTGCTCGGCACGCAGGAACAGCGGCAGTTCGGCACGTCCTTCCGCATCGTCGGCAGCGAGGGCTAC CACGTCCTGCAGCGGCGCGGTCAGCGCGGCGACTGGGCCGCCGTGTACCGGTTCCGGCCGGTACCGCGCGACCTCGCTGA CTGGTCGGCCCCGTCAGAGGAGCTCACCGCCTTCGCCCGGGCGCTGGCGGGAGCGGGGACGCTCGTGCGCGGCCGGGCGA CCCTCTCCGGGCAGCGGATCCTGATCGGCAAGCGGCTGGTGACCGTCGACAACGGGCACGAGGCCATGCGGGTGCTCACC GACCCGGCCGAGCACGCCCGCGTGCTCGCCGACATCCTCCGCCGCCCGCCGGCACCCGCCACCGCGCCCACCGGCGACGC CCGGTGA
Upstream 100 bases:
>100_bases GCGGCGACCGGCCTCACGCTGCCCGCGATGTTGCTGTTCGACCACGCGGTGCCCCGCGAGGTCGCCGCGTACCTGCTGGA CCGGCTGGAGGTCGAGACCC
Downstream 100 bases:
>100_bases CCGCGCCCGAGCCGGCCGAGGTCGAGGCCGAGGTCGAGGCCGAGGCTGAGGCCATGGCCGACGTCGTCGTCGTCGGCTAC GGGCCGGTCGGCCAGGTAAC
Product: N-acetyltransferase
Products: CoA; an n-acetoxyarylamine [C]
Alternate protein names: AHBA synthase; Rifamycin amide synthase [H]
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MFDVEAYLKALDHRGPADASPETLRRLHHAHLRTVPYDSELNSTRGTDLWKGVDIDADAVFDAVVLGGRGGVCYELNGLF RRLLAELGFETGVYAAAIRQVDGSFGPDLEHIFTFVRLDDEVLLVDVGFVGPSYLEPLLLGTQEQRQFGTSFRIVGSEGY HVLQRRGQRGDWAAVYRFRPVPRDLADWSAPSEELTAFARALAGAGTLVRGRATLSGQRILIGKRLVTVDNGHEAMRVLT DPAEHARVLADILRRPPAPATAPTGDAR
Sequences:
>Translated_268_residues MFDVEAYLKALDHRGPADASPETLRRLHHAHLRTVPYDSELNSTRGTDLWKGVDIDADAVFDAVVLGGRGGVCYELNGLF RRLLAELGFETGVYAAAIRQVDGSFGPDLEHIFTFVRLDDEVLLVDVGFVGPSYLEPLLLGTQEQRQFGTSFRIVGSEGY HVLQRRGQRGDWAAVYRFRPVPRDLADWSAPSEELTAFARALAGAGTLVRGRATLSGQRILIGKRLVTVDNGHEAMRVLT DPAEHARVLADILRRPPAPATAPTGDAR >Mature_268_residues MFDVEAYLKALDHRGPADASPETLRRLHHAHLRTVPYDSELNSTRGTDLWKGVDIDADAVFDAVVLGGRGGVCYELNGLF RRLLAELGFETGVYAAAIRQVDGSFGPDLEHIFTFVRLDDEVLLVDVGFVGPSYLEPLLLGTQEQRQFGTSFRIVGSEGY HVLQRRGQRGDWAAVYRFRPVPRDLADWSAPSEELTAFARALAGAGTLVRGRATLSGQRILIGKRLVTVDNGHEAMRVLT DPAEHARVLADILRRPPAPATAPTGDAR
Specific function: Putatively terminates polyketide biosynthesis by transfer of polyketide acyl chain to the secondary amine on the 3- AHBA starter unit [H]
COG id: COG2162
COG function: function code Q; Arylamine N-acetyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the arylamine N-acetyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001447 [H]
Pfam domain/function: PF00797 Acetyltransf_2 [H]
EC number: 2.3.1.118 [C]
Molecular weight: Translated: 29412; Mature: 29412
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDVEAYLKALDHRGPADASPETLRRLHHAHLRTVPYDSELNSTRGTDLWKGVDIDADAV CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCHHHH FDAVVLGGRGGVCYELNGLFRRLLAELGFETGVYAAAIRQVDGSFGPDLEHIFTFVRLDD HHHHEECCCCCEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHEECC EVLLVDVGFVGPSYLEPLLLGTQEQRQFGTSFRIVGSEGYHVLQRRGQRGDWAAVYRFRP CEEEEEECCCCHHHHHHHHCCCHHHHHCCCEEEEECCCCHHHHHHCCCCCCEEEEEEECC VPRDLADWSAPSEELTAFARALAGAGTLVRGRATLSGQRILIGKRLVTVDNGHEAMRVLT CCCHHHHCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEEEEEEECCCHHHHHHHC DPAEHARVLADILRRPPAPATAPTGDAR CCHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MFDVEAYLKALDHRGPADASPETLRRLHHAHLRTVPYDSELNSTRGTDLWKGVDIDADAV CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCHHHH FDAVVLGGRGGVCYELNGLFRRLLAELGFETGVYAAAIRQVDGSFGPDLEHIFTFVRLDD HHHHEECCCCCEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHEECC EVLLVDVGFVGPSYLEPLLLGTQEQRQFGTSFRIVGSEGYHVLQRRGQRGDWAAVYRFRP CEEEEEECCCCHHHHHHHHCCCHHHHHCCCEEEEECCCCHHHHHHCCCCCCEEEEEEECC VPRDLADWSAPSEELTAFARALAGAGTLVRGRATLSGQRILIGKRLVTVDNGHEAMRVLT CCCHHHHCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEEEEEEECCCHHHHHHHC DPAEHARVLADILRRPPAPATAPTGDAR CCHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Acetyl-CoA; an n-hydroxyarylamine [C]
Specific reaction: Acetyl-CoA + an n-hydroxyarylamine = CoA + an n-acetoxyarylamine [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9497318 [H]