Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158316594

Identifier: 158316594

GI number: 158316594

Start: 5769256

End: 5769780

Strand: Reverse

Name: 158316594

Synonym: Franean1_4830

Alternate gene names: NA

Gene position: 5769780-5769256 (Counterclockwise)

Preceding gene: 158316595

Following gene: 158316593

Centisome position: 64.24

GC content: 74.86

Gene sequence:

>525_bases
ATGACCGACCCGGACAGCGCCGCCTCGCCGGACGGATCGGCGCCGCAGGGATACGGCCCCGGCCGGGGCCCCGGCGCGCT
CGCGCTCACCGACGGTGAGCTGAGCCGGATCCTCGCCACCCACCAGATGGGCGCGCTCGCGTCGAACAAGCGGGACGGCC
ATCCGCACCTGTCGACGGTCGCCTACAGCTGGGACCCCACGGAACGCACGATCCGGATCAGCACCACCGAGGACCGGCTG
AAGGTGCGCCTGCTGCGGCGTGACCCGCGCGCGGCGCTGTACGTGACCGCGCCCGACTACCTGTCGTTCGCGGTGGCCCA
GGGCACGGTCGAGCTCTCCGCGGTGAGCTCGGTGCCGGGCGATCCCGCCGGGCGCGAGCTGCTCGCCCTGCAGCCACCGT
TCGCCGACCCGGCGCTGGAGGCCGAGTTCCTGCGGAACATGGCGGCCGACCGCCGGCTGGTCATCCGGCTGCGCGTCGGC
CGGCTGTACGGCACGGCGCTCGACAGTCCCGCGCCACCCGCCTGA

Upstream 100 bases:

>100_bases
AGAGCTTCGCAATAGACATCAACGCCGCTGGCAGGGTGCTCGGCTACGCGATCGACGAGACGGGCGGCGTCCACAGCTTC
GTCTGGACGGTGACCGGCGG

Downstream 100 bases:

>100_bases
CCTTCACGGCCGCGCCCTCCCGCCGACCGGCCAGGCGATAAGACAGGGGAGTCACAGGGGTGACCGGGTGGGTTCCCCCG
CTGGTACGTTCCGGAAATGG

Product: pyridoxamine 5'-phosphate oxidase-like protein

Products: NA

Alternate protein names: PNP/PMP oxidase; PNPOx; Pyridoxal 5'-phosphate synthase [H]

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MTDPDSAASPDGSAPQGYGPGRGPGALALTDGELSRILATHQMGALASNKRDGHPHLSTVAYSWDPTERTIRISTTEDRL
KVRLLRRDPRAALYVTAPDYLSFAVAQGTVELSAVSSVPGDPAGRELLALQPPFADPALEAEFLRNMAADRRLVIRLRVG
RLYGTALDSPAPPA

Sequences:

>Translated_174_residues
MTDPDSAASPDGSAPQGYGPGRGPGALALTDGELSRILATHQMGALASNKRDGHPHLSTVAYSWDPTERTIRISTTEDRL
KVRLLRRDPRAALYVTAPDYLSFAVAQGTVELSAVSSVPGDPAGRELLALQPPFADPALEAEFLRNMAADRRLVIRLRVG
RLYGTALDSPAPPA
>Mature_173_residues
TDPDSAASPDGSAPQGYGPGRGPGALALTDGELSRILATHQMGALASNKRDGHPHLSTVAYSWDPTERTIRISTTEDRLK
VRLLRRDPRAALYVTAPDYLSFAVAQGTVELSAVSSVPGDPAGRELLALQPPFADPALEAEFLRNMAADRRLVIRLRVGR
LYGTALDSPAPPA

Specific function: Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019920
- InterPro:   IPR011576
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01243 Pyridox_oxidase [H]

EC number: =1.4.3.5 [H]

Molecular weight: Translated: 18511; Mature: 18380

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDPDSAASPDGSAPQGYGPGRGPGALALTDGELSRILATHQMGALASNKRDGHPHLSTV
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCEEEE
AYSWDPTERTIRISTTEDRLKVRLLRRDPRAALYVTAPDYLSFAVAQGTVELSAVSSVPG
EEEECCCCCEEEEECCHHHEEEEEEECCCCEEEEEECCHHHHHHHHCCEEEEEEECCCCC
DPAGRELLALQPPFADPALEAEFLRNMAADRRLVIRLRVGRLYGTALDSPAPPA
CCCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEEECHHCCCCCCCCCCCC
>Mature Secondary Structure 
TDPDSAASPDGSAPQGYGPGRGPGALALTDGELSRILATHQMGALASNKRDGHPHLSTV
CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCEEEE
AYSWDPTERTIRISTTEDRLKVRLLRRDPRAALYVTAPDYLSFAVAQGTVELSAVSSVPG
EEEECCCCCEEEEECCHHHEEEEEEECCCCEEEEEECCHHHHHHHHCCEEEEEEECCCCC
DPAGRELLALQPPFADPALEAEFLRNMAADRRLVIRLRVGRLYGTALDSPAPPA
CCCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEEECHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230 [H]