Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158316587

Identifier: 158316587

GI number: 158316587

Start: 5759204

End: 5760205

Strand: Reverse

Name: 158316587

Synonym: Franean1_4823

Alternate gene names: NA

Gene position: 5760205-5759204 (Counterclockwise)

Preceding gene: 158316588

Following gene: 158316586

Centisome position: 64.13

GC content: 63.07

Gene sequence:

>1002_bases
ATGACGGACGAAGGGGATAGTACGGCCGACAGTGGCACTTCGAACAGCGGTGCCACGACCAACATCGCGAGCGGCAACGC
GCAGGTTGGAGTACAGGCCGAGGTGATCCTCGGTGATGTCGCGATCTACCAGATCCCGGAGGATGCCACTCCGGAGGAGA
AATTCGAGGTCGGAGTCCGGTTCCTCGAGGGTTTGATGCCCGGGCGTGCGCGTGAACTCATCGACGAGGCGTTTGCCGGC
GGCCACTCGACCAGCAGGGTTCATTTTTACCGCCTGCTGGCACTGGTGAGCGGGCGGCCGCGCAGCGAGCTGTCCGGCGA
GGAGACGGCACGGCTGAAACGCGCGCTGAACGATCCGATTCCTGTCACCGAAGAGTGGTCCGACGGCCTGCGGGTGACGA
TCCTGATCCTGGAGTCGGCGCGCCGAGCCGACGCCGACATCCGAGTTCCGCTCAAGGAACTCGACGATCTCGATCCGTTG
CAGGGAAGTCTGATTCTGCGGCATCTCGAACAATTCCTGGAAGGGCCGATCGAGGACCAGATGTGGCACCGCTCCCTGGA
GCGAGCGGAAAGCAGGAAGCTGGCCGACGGTCGTGCGGACCGAGTCTGGAAGTTCTTCCAAGCCGAGCCTGCGCGCCCTC
GTGTCCGCGTGCCGCGGCCGCCGGTCACCCGTCCCGTGCCGAGGATGATCGCCGGGGCATCGGCAGTGGTCGTTGGCGCG
TGCGCGGTGTACCTCGGTATCCTGCTTACGCTGGAAAGTCGGCTCGGTGTGCTCACGCTCTTTCTGGTGAGCGTAACAGT
CGGCGGAAGCGGGCTGCGACATGACATCGAGTGGCGTTTTCAGTACGCGACCTCCCGGCTGGCTTCCAGTTCGCGATCCG
CTGGCTTCGCCAGCGAGGTCGACCGCGAGTTCAGGTACTACTTCACCAAATATCATCCGGATGACGTCGACAGCAGCACC
TGGTGCAATGCCGTGAAGCTTAATTCGATCTTGAATGGTTGA

Upstream 100 bases:

>100_bases
CGTTGCGGGTGGCGCTGAAGAAGCTCAAGGGGCTTGTCGGTGACGTGTCCGATCTCGCCGCGAAGATCACGATTGTCCTG
GCGCTTGCCCGGAATTTGCC

Downstream 100 bases:

>100_bases
TGTTCGCTGTTCGTGGTTGGCGGGTTGGTACGGCGTGGCGGCGTGGCCTCGGTGCCGCTGGGTGGTTTGGTCACGGTTCG
TGGCTTCGATGGTGACCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MTDEGDSTADSGTSNSGATTNIASGNAQVGVQAEVILGDVAIYQIPEDATPEEKFEVGVRFLEGLMPGRARELIDEAFAG
GHSTSRVHFYRLLALVSGRPRSELSGEETARLKRALNDPIPVTEEWSDGLRVTILILESARRADADIRVPLKELDDLDPL
QGSLILRHLEQFLEGPIEDQMWHRSLERAESRKLADGRADRVWKFFQAEPARPRVRVPRPPVTRPVPRMIAGASAVVVGA
CAVYLGILLTLESRLGVLTLFLVSVTVGGSGLRHDIEWRFQYATSRLASSSRSAGFASEVDREFRYYFTKYHPDDVDSST
WCNAVKLNSILNG

Sequences:

>Translated_333_residues
MTDEGDSTADSGTSNSGATTNIASGNAQVGVQAEVILGDVAIYQIPEDATPEEKFEVGVRFLEGLMPGRARELIDEAFAG
GHSTSRVHFYRLLALVSGRPRSELSGEETARLKRALNDPIPVTEEWSDGLRVTILILESARRADADIRVPLKELDDLDPL
QGSLILRHLEQFLEGPIEDQMWHRSLERAESRKLADGRADRVWKFFQAEPARPRVRVPRPPVTRPVPRMIAGASAVVVGA
CAVYLGILLTLESRLGVLTLFLVSVTVGGSGLRHDIEWRFQYATSRLASSSRSAGFASEVDREFRYYFTKYHPDDVDSST
WCNAVKLNSILNG
>Mature_332_residues
TDEGDSTADSGTSNSGATTNIASGNAQVGVQAEVILGDVAIYQIPEDATPEEKFEVGVRFLEGLMPGRARELIDEAFAGG
HSTSRVHFYRLLALVSGRPRSELSGEETARLKRALNDPIPVTEEWSDGLRVTILILESARRADADIRVPLKELDDLDPLQ
GSLILRHLEQFLEGPIEDQMWHRSLERAESRKLADGRADRVWKFFQAEPARPRVRVPRPPVTRPVPRMIAGASAVVVGAC
AVYLGILLTLESRLGVLTLFLVSVTVGGSGLRHDIEWRFQYATSRLASSSRSAGFASEVDREFRYYFTKYHPDDVDSSTW
CNAVKLNSILNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36734; Mature: 36603

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDEGDSTADSGTSNSGATTNIASGNAQVGVQAEVILGDVAIYQIPEDATPEEKFEVGVR
CCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEECEEEEECCCCCCCHHHHHHHHH
FLEGLMPGRARELIDEAFAGGHSTSRVHFYRLLALVSGRPRSELSGEETARLKRALNDPI
HHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCC
PVTEEWSDGLRVTILILESARRADADIRVPLKELDDLDPLQGSLILRHLEQFLEGPIEDQ
CCCCCCCCCCEEEEEEEECCCCCCCCEECCHHHCCCCCCCHHHHHHHHHHHHHCCCCHHH
MWHRSLERAESRKLADGRADRVWKFFQAEPARPRVRVPRPPVTRPVPRMIAGASAVVVGA
HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHH
CAVYLGILLTLESRLGVLTLFLVSVTVGGSGLRHDIEWRFQYATSRLASSSRSAGFASEV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHH
DREFRYYFTKYHPDDVDSSTWCNAVKLNSILNG
HHHHHHHHHEECCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TDEGDSTADSGTSNSGATTNIASGNAQVGVQAEVILGDVAIYQIPEDATPEEKFEVGVR
CCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEECEEEEECCCCCCCHHHHHHHHH
FLEGLMPGRARELIDEAFAGGHSTSRVHFYRLLALVSGRPRSELSGEETARLKRALNDPI
HHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCC
PVTEEWSDGLRVTILILESARRADADIRVPLKELDDLDPLQGSLILRHLEQFLEGPIEDQ
CCCCCCCCCCEEEEEEEECCCCCCCCEECCHHHCCCCCCCHHHHHHHHHHHHHCCCCHHH
MWHRSLERAESRKLADGRADRVWKFFQAEPARPRVRVPRPPVTRPVPRMIAGASAVVVGA
HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHH
CAVYLGILLTLESRLGVLTLFLVSVTVGGSGLRHDIEWRFQYATSRLASSSRSAGFASEV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHH
DREFRYYFTKYHPDDVDSSTWCNAVKLNSILNG
HHHHHHHHHEECCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA