| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316587
Identifier: 158316587
GI number: 158316587
Start: 5759204
End: 5760205
Strand: Reverse
Name: 158316587
Synonym: Franean1_4823
Alternate gene names: NA
Gene position: 5760205-5759204 (Counterclockwise)
Preceding gene: 158316588
Following gene: 158316586
Centisome position: 64.13
GC content: 63.07
Gene sequence:
>1002_bases ATGACGGACGAAGGGGATAGTACGGCCGACAGTGGCACTTCGAACAGCGGTGCCACGACCAACATCGCGAGCGGCAACGC GCAGGTTGGAGTACAGGCCGAGGTGATCCTCGGTGATGTCGCGATCTACCAGATCCCGGAGGATGCCACTCCGGAGGAGA AATTCGAGGTCGGAGTCCGGTTCCTCGAGGGTTTGATGCCCGGGCGTGCGCGTGAACTCATCGACGAGGCGTTTGCCGGC GGCCACTCGACCAGCAGGGTTCATTTTTACCGCCTGCTGGCACTGGTGAGCGGGCGGCCGCGCAGCGAGCTGTCCGGCGA GGAGACGGCACGGCTGAAACGCGCGCTGAACGATCCGATTCCTGTCACCGAAGAGTGGTCCGACGGCCTGCGGGTGACGA TCCTGATCCTGGAGTCGGCGCGCCGAGCCGACGCCGACATCCGAGTTCCGCTCAAGGAACTCGACGATCTCGATCCGTTG CAGGGAAGTCTGATTCTGCGGCATCTCGAACAATTCCTGGAAGGGCCGATCGAGGACCAGATGTGGCACCGCTCCCTGGA GCGAGCGGAAAGCAGGAAGCTGGCCGACGGTCGTGCGGACCGAGTCTGGAAGTTCTTCCAAGCCGAGCCTGCGCGCCCTC GTGTCCGCGTGCCGCGGCCGCCGGTCACCCGTCCCGTGCCGAGGATGATCGCCGGGGCATCGGCAGTGGTCGTTGGCGCG TGCGCGGTGTACCTCGGTATCCTGCTTACGCTGGAAAGTCGGCTCGGTGTGCTCACGCTCTTTCTGGTGAGCGTAACAGT CGGCGGAAGCGGGCTGCGACATGACATCGAGTGGCGTTTTCAGTACGCGACCTCCCGGCTGGCTTCCAGTTCGCGATCCG CTGGCTTCGCCAGCGAGGTCGACCGCGAGTTCAGGTACTACTTCACCAAATATCATCCGGATGACGTCGACAGCAGCACC TGGTGCAATGCCGTGAAGCTTAATTCGATCTTGAATGGTTGA
Upstream 100 bases:
>100_bases CGTTGCGGGTGGCGCTGAAGAAGCTCAAGGGGCTTGTCGGTGACGTGTCCGATCTCGCCGCGAAGATCACGATTGTCCTG GCGCTTGCCCGGAATTTGCC
Downstream 100 bases:
>100_bases TGTTCGCTGTTCGTGGTTGGCGGGTTGGTACGGCGTGGCGGCGTGGCCTCGGTGCCGCTGGGTGGTTTGGTCACGGTTCG TGGCTTCGATGGTGACCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MTDEGDSTADSGTSNSGATTNIASGNAQVGVQAEVILGDVAIYQIPEDATPEEKFEVGVRFLEGLMPGRARELIDEAFAG GHSTSRVHFYRLLALVSGRPRSELSGEETARLKRALNDPIPVTEEWSDGLRVTILILESARRADADIRVPLKELDDLDPL QGSLILRHLEQFLEGPIEDQMWHRSLERAESRKLADGRADRVWKFFQAEPARPRVRVPRPPVTRPVPRMIAGASAVVVGA CAVYLGILLTLESRLGVLTLFLVSVTVGGSGLRHDIEWRFQYATSRLASSSRSAGFASEVDREFRYYFTKYHPDDVDSST WCNAVKLNSILNG
Sequences:
>Translated_333_residues MTDEGDSTADSGTSNSGATTNIASGNAQVGVQAEVILGDVAIYQIPEDATPEEKFEVGVRFLEGLMPGRARELIDEAFAG GHSTSRVHFYRLLALVSGRPRSELSGEETARLKRALNDPIPVTEEWSDGLRVTILILESARRADADIRVPLKELDDLDPL QGSLILRHLEQFLEGPIEDQMWHRSLERAESRKLADGRADRVWKFFQAEPARPRVRVPRPPVTRPVPRMIAGASAVVVGA CAVYLGILLTLESRLGVLTLFLVSVTVGGSGLRHDIEWRFQYATSRLASSSRSAGFASEVDREFRYYFTKYHPDDVDSST WCNAVKLNSILNG >Mature_332_residues TDEGDSTADSGTSNSGATTNIASGNAQVGVQAEVILGDVAIYQIPEDATPEEKFEVGVRFLEGLMPGRARELIDEAFAGG HSTSRVHFYRLLALVSGRPRSELSGEETARLKRALNDPIPVTEEWSDGLRVTILILESARRADADIRVPLKELDDLDPLQ GSLILRHLEQFLEGPIEDQMWHRSLERAESRKLADGRADRVWKFFQAEPARPRVRVPRPPVTRPVPRMIAGASAVVVGAC AVYLGILLTLESRLGVLTLFLVSVTVGGSGLRHDIEWRFQYATSRLASSSRSAGFASEVDREFRYYFTKYHPDDVDSSTW CNAVKLNSILNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36734; Mature: 36603
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDEGDSTADSGTSNSGATTNIASGNAQVGVQAEVILGDVAIYQIPEDATPEEKFEVGVR CCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEECEEEEECCCCCCCHHHHHHHHH FLEGLMPGRARELIDEAFAGGHSTSRVHFYRLLALVSGRPRSELSGEETARLKRALNDPI HHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCC PVTEEWSDGLRVTILILESARRADADIRVPLKELDDLDPLQGSLILRHLEQFLEGPIEDQ CCCCCCCCCCEEEEEEEECCCCCCCCEECCHHHCCCCCCCHHHHHHHHHHHHHCCCCHHH MWHRSLERAESRKLADGRADRVWKFFQAEPARPRVRVPRPPVTRPVPRMIAGASAVVVGA HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHH CAVYLGILLTLESRLGVLTLFLVSVTVGGSGLRHDIEWRFQYATSRLASSSRSAGFASEV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHH DREFRYYFTKYHPDDVDSSTWCNAVKLNSILNG HHHHHHHHHEECCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure TDEGDSTADSGTSNSGATTNIASGNAQVGVQAEVILGDVAIYQIPEDATPEEKFEVGVR CCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEECEEEEECCCCCCCHHHHHHHHH FLEGLMPGRARELIDEAFAGGHSTSRVHFYRLLALVSGRPRSELSGEETARLKRALNDPI HHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCC PVTEEWSDGLRVTILILESARRADADIRVPLKELDDLDPLQGSLILRHLEQFLEGPIEDQ CCCCCCCCCCEEEEEEEECCCCCCCCEECCHHHCCCCCCCHHHHHHHHHHHHHCCCCHHH MWHRSLERAESRKLADGRADRVWKFFQAEPARPRVRVPRPPVTRPVPRMIAGASAVVVGA HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHH CAVYLGILLTLESRLGVLTLFLVSVTVGGSGLRHDIEWRFQYATSRLASSSRSAGFASEV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHH DREFRYYFTKYHPDDVDSSTWCNAVKLNSILNG HHHHHHHHHEECCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA