| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is mtnN [H]
Identifier: 158316588
GI number: 158316588
Start: 5760202
End: 5762190
Strand: Reverse
Name: mtnN [H]
Synonym: Franean1_4824
Alternate gene names: 158316588
Gene position: 5762190-5760202 (Counterclockwise)
Preceding gene: 158316589
Following gene: 158316587
Centisome position: 64.15
GC content: 68.38
Gene sequence:
>1989_bases GTGACGTCCGCCAGGGGGGCGTCTTTTTCTGTCAGCGTGACAAGAAGCTATTCTCGCCGCGTGGACGATGATCCGTGGGA ACCTCCCGCCGTTATGGTCGCCGTCGACCTGGTGGTTCTTACATTGCGTGGGGCGAGCCTGCGGGTACTTCTCGTTGAAC GGGGAGTCGAGCCGTACCGAAATTTCCTGGCGCTACCCGGAGGTTTTCTCGCCCATGCGGAGGAGGATCTGACCTCCGCG GCCCGGCGCGAACTCTCACAGGAAACGGGGGTCGATCCGCGGCTGCTGCATCTCGAACAGTTCGGCGTCTACGGAGAGCC GGGCAGGGATCCGCGGGGCCGGGTCGTCTCGGTGGCCTATCTCGCGATCGAGCCACAGCTGCCCGAGCCAGTCGCCGGTA CGGACGCGATCGGGGCGGGCTGGCATCCGGTCGACCGGGTGCTCGCCGGGGACGTCACGCTCGCGTTCGACCATCTCCAG GTTGTCGCGGACGGAGTCGAACGAGCCCGTTCGAAGATTGAGCACTCGACGCTGGCGACGGCATTCTGCGCGCCCATCTT CACGATCGCGGAACTGAAGGATGTATACGAGGCGGTGTGGGGAGTACCCGTGGACCCACGGAACTTCTACCGCAAGGTCC AGAAGACCGGCGGATTCATAGTCTCCGCCGGCGCGACACGGCGGACGGCAGGCGGGCGCCCGGCCCGGCTCTTCAGAGCC GGCCCGAGCGCTGTGCTCTCGCCGCCGCTGTCCCGACCGGCGGTCTCTCCGGGGAGTCCTGGAACGGCCAGCGCAATGCA CACAGAGGGGGGAACCCGAATGAGTCGGCGACCAGTCGTGATTCTCACGGCACTCGATCTGGAATATCAAGCGATCCGTG AGAGCCTTGTCGACCCGCGCCTGCACCGCCATGACCAGGGCACTCGATTCGAACTCGGACGGCTGGCCGGAGGCAGCTGC CGGATCGCCCTCGCCCATGTCGGTAAGGGCACCCATCCGGCCGCCGTGCTGGCCGAGCGCGCGATCGCCGAGTTCGCCCC GGCGGCGCTGCTCTTCGTGGGGGTCGCGGGTGCCCTGCACGGACACATAGCCCTGGGCGACGTCGTTGTGGCGACCCACG TGTACGCGTTCCACGGCGGTACCGGCGAGGACGACGGGTTGAAGGCACGGCCCCGTGTCTGGGAGACCTCGCACGCGGCC GACCAGATCGCTCGGCACATTCACCGGACGGGTTCCTGGGCGCAGCGGCCAGGAGCTCCCGCCATGCTGCCCGACGTGCA CTTCGGACCGATCGCCGCCGGCGAGGTCGTGCTGAACTCCAGGGTCTCCGGACTCGCCCGCTGGATACGTGAGCACTACA ACGACGCCCTGGCGATCGAGATGGAGGGGGCCGGCGTCGCGCAGGCCGGGCACCTGAACCGGGCGCTGCCGGTCGTCGTG ATCCGTGGTGTCAGCGACCGCGCCGACGGGACCAAGGAGTCCACGGACCGCCAGCGGTGGCAGCAGCGCGCGGTCGCCAA CGCGGCACTGTTCGCGACGGCACTGGCCGAGGAGATTTCCGCAGAGGACGACGGCGCCGGACGCCCGGCAGCGAAATCAA CGAAAGGAGCCGCAGTGCGCGAGTACGTTCAGAGCGTTCACAACGAGAACTCCGGCAGCGGGCCGGTGGGTGTACAGGCC CACACCGTGCACGGCGGTGTCGTGCACGTCACCGGCGGCGCTCGCCCGCCGGTCGACCTCCCGATGGCCCTCGCGGAGAT ACGCACGCGGTTCCAAGCAGCCCGGGCGGCCGGTGCGGTGGACGAGGACACCTACGCCGCCGCGGAGGCGGAGCTCGCGG TGGCCGAGGAGGCCCTCAAAGCGGACACGCCACAGAGCCACAGCACGTTGCGGGTGGCGCTGAAGAAGCTCAAGGGGCTT GTCGGTGACGTGTCCGATCTCGCCGCGAAGATCACGATTGTCCTGGCGCTTGCCCGGAATTTGCCATGA
Upstream 100 bases:
>100_bases TGATGGCAGAGCCGCCAAACCTCGGCCAGCCTAATGTTCGGCTGCGTGACATGCGTCTGCCGGACGTCGGCACTGTCGCC AAGCAGATCGTGCTGTTTCT
Downstream 100 bases:
>100_bases CGGACGAAGGGGATAGTACGGCCGACAGTGGCACTTCGAACAGCGGTGCCACGACCAACATCGCGAGCGGCAACGCGCAG GTTGGAGTACAGGCCGAGGT
Product: NUDIX hydrolase
Products: NA
Alternate protein names: MTA/SAH nucleosidase; MTAN; 5'-methylthioadenosine nucleosidase; MTA nucleosidase; S-adenosylhomocysteine nucleosidase; AdoHcy nucleosidase; SAH nucleosidase; SRH nucleosidase [H]
Number of amino acids: Translated: 662; Mature: 661
Protein sequence:
>662_residues MTSARGASFSVSVTRSYSRRVDDDPWEPPAVMVAVDLVVLTLRGASLRVLLVERGVEPYRNFLALPGGFLAHAEEDLTSA ARRELSQETGVDPRLLHLEQFGVYGEPGRDPRGRVVSVAYLAIEPQLPEPVAGTDAIGAGWHPVDRVLAGDVTLAFDHLQ VVADGVERARSKIEHSTLATAFCAPIFTIAELKDVYEAVWGVPVDPRNFYRKVQKTGGFIVSAGATRRTAGGRPARLFRA GPSAVLSPPLSRPAVSPGSPGTASAMHTEGGTRMSRRPVVILTALDLEYQAIRESLVDPRLHRHDQGTRFELGRLAGGSC RIALAHVGKGTHPAAVLAERAIAEFAPAALLFVGVAGALHGHIALGDVVVATHVYAFHGGTGEDDGLKARPRVWETSHAA DQIARHIHRTGSWAQRPGAPAMLPDVHFGPIAAGEVVLNSRVSGLARWIREHYNDALAIEMEGAGVAQAGHLNRALPVVV IRGVSDRADGTKESTDRQRWQQRAVANAALFATALAEEISAEDDGAGRPAAKSTKGAAVREYVQSVHNENSGSGPVGVQA HTVHGGVVHVTGGARPPVDLPMALAEIRTRFQAARAAGAVDEDTYAAAEAELAVAEEALKADTPQSHSTLRVALKKLKGL VGDVSDLAAKITIVLALARNLP
Sequences:
>Translated_662_residues MTSARGASFSVSVTRSYSRRVDDDPWEPPAVMVAVDLVVLTLRGASLRVLLVERGVEPYRNFLALPGGFLAHAEEDLTSA ARRELSQETGVDPRLLHLEQFGVYGEPGRDPRGRVVSVAYLAIEPQLPEPVAGTDAIGAGWHPVDRVLAGDVTLAFDHLQ VVADGVERARSKIEHSTLATAFCAPIFTIAELKDVYEAVWGVPVDPRNFYRKVQKTGGFIVSAGATRRTAGGRPARLFRA GPSAVLSPPLSRPAVSPGSPGTASAMHTEGGTRMSRRPVVILTALDLEYQAIRESLVDPRLHRHDQGTRFELGRLAGGSC RIALAHVGKGTHPAAVLAERAIAEFAPAALLFVGVAGALHGHIALGDVVVATHVYAFHGGTGEDDGLKARPRVWETSHAA DQIARHIHRTGSWAQRPGAPAMLPDVHFGPIAAGEVVLNSRVSGLARWIREHYNDALAIEMEGAGVAQAGHLNRALPVVV IRGVSDRADGTKESTDRQRWQQRAVANAALFATALAEEISAEDDGAGRPAAKSTKGAAVREYVQSVHNENSGSGPVGVQA HTVHGGVVHVTGGARPPVDLPMALAEIRTRFQAARAAGAVDEDTYAAAEAELAVAEEALKADTPQSHSTLRVALKKLKGL VGDVSDLAAKITIVLALARNLP >Mature_661_residues TSARGASFSVSVTRSYSRRVDDDPWEPPAVMVAVDLVVLTLRGASLRVLLVERGVEPYRNFLALPGGFLAHAEEDLTSAA RRELSQETGVDPRLLHLEQFGVYGEPGRDPRGRVVSVAYLAIEPQLPEPVAGTDAIGAGWHPVDRVLAGDVTLAFDHLQV VADGVERARSKIEHSTLATAFCAPIFTIAELKDVYEAVWGVPVDPRNFYRKVQKTGGFIVSAGATRRTAGGRPARLFRAG PSAVLSPPLSRPAVSPGSPGTASAMHTEGGTRMSRRPVVILTALDLEYQAIRESLVDPRLHRHDQGTRFELGRLAGGSCR IALAHVGKGTHPAAVLAERAIAEFAPAALLFVGVAGALHGHIALGDVVVATHVYAFHGGTGEDDGLKARPRVWETSHAAD QIARHIHRTGSWAQRPGAPAMLPDVHFGPIAAGEVVLNSRVSGLARWIREHYNDALAIEMEGAGVAQAGHLNRALPVVVI RGVSDRADGTKESTDRQRWQQRAVANAALFATALAEEISAEDDGAGRPAAKSTKGAAVREYVQSVHNENSGSGPVGVQAH TVHGGVVHVTGGARPPVDLPMALAEIRTRFQAARAAGAVDEDTYAAAEAELAVAEEALKADTPQSHSTLRVALKKLKGLV GDVSDLAAKITIVLALARNLP
Specific function: Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively [H]
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNP/UDP phosphorylase family. MtnN subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010049 - InterPro: IPR018017 - InterPro: IPR000845 [H]
Pfam domain/function: PF01048 PNP_UDP_1 [H]
EC number: =3.2.2.9 [H]
Molecular weight: Translated: 70078; Mature: 69947
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSARGASFSVSVTRSYSRRVDDDPWEPPAVMVAVDLVVLTLRGASLRVLLVERGVEPYR CCCCCCCEEEEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHH NFLALPGGFLAHAEEDLTSAARRELSQETGVDPRLLHLEQFGVYGEPGRDPRGRVVSVAY HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCCCCCCCCCCCEEEEEE LAIEPQLPEPVAGTDAIGAGWHPVDRVLAGDVTLAFDHLQVVADGVERARSKIEHSTLAT EEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH AFCAPIFTIAELKDVYEAVWGVPVDPRNFYRKVQKTGGFIVSAGATRRTAGGRPARLFRA HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHEEEC GPSAVLSPPLSRPAVSPGSPGTASAMHTEGGTRMSRRPVVILTALDLEYQAIRESLVDPR CCCHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCHHHHHHHHHCCCH LHRHDQGTRFELGRLAGGSCRIALAHVGKGTHPAAVLAERAIAEFAPAALLFVGVAGALH HHHCCCCCCEEHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GHIALGDVVVATHVYAFHGGTGEDDGLKARPRVWETSHAADQIARHIHRTGSWAQRPGAP CCHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC AMLPDVHFGPIAAGEVVLNSRVSGLARWIREHYNDALAIEMEGAGVAQAGHLNRALPVVV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEE IRGVSDRADGTKESTDRQRWQQRAVANAALFATALAEEISAEDDGAGRPAAKSTKGAAVR EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH EYVQSVHNENSGSGPVGVQAHTVHGGVVHVTGGARPPVDLPMALAEIRTRFQAARAAGAV HHHHHHHCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCC DEDTYAAAEAELAVAEEALKADTPQSHSTLRVALKKLKGLVGDVSDLAAKITIVLALARN CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC LP CC >Mature Secondary Structure TSARGASFSVSVTRSYSRRVDDDPWEPPAVMVAVDLVVLTLRGASLRVLLVERGVEPYR CCCCCCEEEEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHH NFLALPGGFLAHAEEDLTSAARRELSQETGVDPRLLHLEQFGVYGEPGRDPRGRVVSVAY HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCCCCCCCCCCCEEEEEE LAIEPQLPEPVAGTDAIGAGWHPVDRVLAGDVTLAFDHLQVVADGVERARSKIEHSTLAT EEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH AFCAPIFTIAELKDVYEAVWGVPVDPRNFYRKVQKTGGFIVSAGATRRTAGGRPARLFRA HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHEEEC GPSAVLSPPLSRPAVSPGSPGTASAMHTEGGTRMSRRPVVILTALDLEYQAIRESLVDPR CCCHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCHHHHHHHHHCCCH LHRHDQGTRFELGRLAGGSCRIALAHVGKGTHPAAVLAERAIAEFAPAALLFVGVAGALH HHHCCCCCCEEHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GHIALGDVVVATHVYAFHGGTGEDDGLKARPRVWETSHAADQIARHIHRTGSWAQRPGAP CCHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC AMLPDVHFGPIAAGEVVLNSRVSGLARWIREHYNDALAIEMEGAGVAQAGHLNRALPVVV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEE IRGVSDRADGTKESTDRQRWQQRAVANAALFATALAEEISAEDDGAGRPAAKSTKGAAVR EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH EYVQSVHNENSGSGPVGVQAHTVHGGVVHVTGGARPPVDLPMALAEIRTRFQAARAAGAV HHHHHHHCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCC DEDTYAAAEAELAVAEEALKADTPQSHSTLRVALKKLKGLVGDVSDLAAKITIVLALARN CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC LP CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA