| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is mhpB [H]
Identifier: 158316511
GI number: 158316511
Start: 5667615
End: 5668550
Strand: Reverse
Name: mhpB [H]
Synonym: Franean1_4746
Alternate gene names: 158316511
Gene position: 5668550-5667615 (Counterclockwise)
Preceding gene: 158316512
Following gene: 158316510
Centisome position: 63.11
GC content: 74.79
Gene sequence:
>936_bases ATGGCGCTCGCCCTCTGCTGCATGTCACACAGCCCGCTGCTCGGCCTGCCCGGCCCGCCGCCGTCTCTCCTGGCTGACGT CGGCACGGCGCTCGCCGCCGCCCGGGACGTGGTGCGCGAGTACGACCCGGACCTGGTCGTCCTGTTCGCCCCGGACCACT ACAACGGCTTCTTCTACCGGCTCATGCCGCCGTTCTGCGTCGGCACCGCGGCGCGCGGTGTCGGCGACTACGGGACGCAG AGCGGCGAGCTCGACGTCCCCGCCGAGCTCGCCTACGGCCTCGCGGAGGCGGCCTGGGCGGCCGACGTCGACGTGGCCGT CTCAACCGGCATGGACGTCGACCACGGCACGGTGCAGCCGCTGGCGGCACTCTTCGGCGACATCGCGGCCCGTCCGGTGG TCCCGGTCTTTGTCAACTCCGTCGCGGTCCCGCTGGCGCCGCTGCGGCGGGCCCGGCTGCTCGGGGACGCGATCGGCCGC TACCTGGCCGGCCTCGACCGGCGGGTGCTCGTGATGGGGTCCGGCGGCCTCTCGCACGACCCGCCCGTTCCGACCCTGGC CAGCCCGCCGGAGGTGCTCGAACGCATCGTGCACGGCCGGCCGCCGACCGTCGGGGAGCGGCAGGCCCGGCAGACCGCGG TGATCGAGGCGGCGGCGGGCTTCGCCCGCGGTGAGGCCGACCTGCAACCGCTCAACCCCGAGTGGGACCGGCGCGTGCTC GACGTCCTCGACCAGGGCCGGCTGGCCGAGCTGGACGGGTGGACCAACGACGGGATCACCCGGGAGGGCGGCAATTCCGC GCACGAGATACGCACGTGGGTCGCCGCGTTCGCGGCGCTCGCCGCAACGGGGCCGTACCAGGTGCGGACCAGCTACTACC GGCCCGCGCCCGAGCTGATCGCCGGCTTCGCCATGCGGACGGCCTTCCCGCGATGA
Upstream 100 bases:
>100_bases CGGCCCGACCGGTGTGTGTCCGGCGCCTGCGTCGCTCAGCTGACATCCGAACTGGCCGCGTCGCTCACCGGCGCGCTGTC CCTCACCCCGGGAGCCGAGG
Downstream 100 bases:
>100_bases GGCCGGCGTCCACCCGCGGGCGGTGCTCGCCCCGACGATTCCGAGGTGCCGCGTGACTGGCAGCGTTGTGACTGGCGGCG TGGGCCGTGAGGCGATCGAG
Product: 3-(2,3-dihydroxyphenyl)propionate dioxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MALALCCMSHSPLLGLPGPPPSLLADVGTALAAARDVVREYDPDLVVLFAPDHYNGFFYRLMPPFCVGTAARGVGDYGTQ SGELDVPAELAYGLAEAAWAADVDVAVSTGMDVDHGTVQPLAALFGDIAARPVVPVFVNSVAVPLAPLRRARLLGDAIGR YLAGLDRRVLVMGSGGLSHDPPVPTLASPPEVLERIVHGRPPTVGERQARQTAVIEAAAGFARGEADLQPLNPEWDRRVL DVLDQGRLAELDGWTNDGITREGGNSAHEIRTWVAAFAALAATGPYQVRTSYYRPAPELIAGFAMRTAFPR
Sequences:
>Translated_311_residues MALALCCMSHSPLLGLPGPPPSLLADVGTALAAARDVVREYDPDLVVLFAPDHYNGFFYRLMPPFCVGTAARGVGDYGTQ SGELDVPAELAYGLAEAAWAADVDVAVSTGMDVDHGTVQPLAALFGDIAARPVVPVFVNSVAVPLAPLRRARLLGDAIGR YLAGLDRRVLVMGSGGLSHDPPVPTLASPPEVLERIVHGRPPTVGERQARQTAVIEAAAGFARGEADLQPLNPEWDRRVL DVLDQGRLAELDGWTNDGITREGGNSAHEIRTWVAAFAALAATGPYQVRTSYYRPAPELIAGFAMRTAFPR >Mature_310_residues ALALCCMSHSPLLGLPGPPPSLLADVGTALAAARDVVREYDPDLVVLFAPDHYNGFFYRLMPPFCVGTAARGVGDYGTQS GELDVPAELAYGLAEAAWAADVDVAVSTGMDVDHGTVQPLAALFGDIAARPVVPVFVNSVAVPLAPLRRARLLGDAIGRY LAGLDRRVLVMGSGGLSHDPPVPTLASPPEVLERIVHGRPPTVGERQARQTAVIEAAAGFARGEADLQPLNPEWDRRVLD VLDQGRLAELDGWTNDGITREGGNSAHEIRTWVAAFAALAATGPYQVRTSYYRPAPELIAGFAMRTAFPR
Specific function: Catalyzes the non-heme iron(II)-dependent oxidative cleavage of 2,3-dihydroxyphenylpropionic acid and 2,3- dihydroxicinnamic acid into 2-hydroxy-6-ketononadienedioate and 2- hydroxy-6-ketononatrienedioate, respectively [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ligB/mhpB extradiol dioxygenase family [H]
Homologues:
Organism=Escherichia coli, GI1786544, Length=310, Percent_Identity=49.0322580645161, Blast_Score=303, Evalue=7e-84,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004183 [H]
Pfam domain/function: PF02900 LigB [H]
EC number: =1.13.11.16 [H]
Molecular weight: Translated: 32978; Mature: 32847
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALALCCMSHSPLLGLPGPPPSLLADVGTALAAARDVVREYDPDLVVLFAPDHYNGFFYR CCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEE LMPPFCVGTAARGVGDYGTQSGELDVPAELAYGLAEAAWAADVDVAVSTGMDVDHGTVQP CCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHH LAALFGDIAARPVVPVFVNSVAVPLAPLRRARLLGDAIGRYLAGLDRRVLVMGSGGLSHD HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC PPVPTLASPPEVLERIVHGRPPTVGERQARQTAVIEAAAGFARGEADLQPLNPEWDRRVL CCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH DVLDQGRLAELDGWTNDGITREGGNSAHEIRTWVAAFAALAATGPYQVRTSYYRPAPELI HHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHH AGFAMRTAFPR HHHHHHHCCCC >Mature Secondary Structure ALALCCMSHSPLLGLPGPPPSLLADVGTALAAARDVVREYDPDLVVLFAPDHYNGFFYR CEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEE LMPPFCVGTAARGVGDYGTQSGELDVPAELAYGLAEAAWAADVDVAVSTGMDVDHGTVQP CCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHH LAALFGDIAARPVVPVFVNSVAVPLAPLRRARLLGDAIGRYLAGLDRRVLVMGSGGLSHD HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC PPVPTLASPPEVLERIVHGRPPTVGERQARQTAVIEAAAGFARGEADLQPLNPEWDRRVL CCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH DVLDQGRLAELDGWTNDGITREGGNSAHEIRTWVAAFAALAATGPYQVRTSYYRPAPELI HHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHH AGFAMRTAFPR HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA