| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is mhpD2 [H]
Identifier: 158316510
GI number: 158316510
Start: 5666750
End: 5667562
Strand: Reverse
Name: mhpD2 [H]
Synonym: Franean1_4745
Alternate gene names: 158316510
Gene position: 5667562-5666750 (Counterclockwise)
Preceding gene: 158316511
Following gene: 158316509
Centisome position: 63.1
GC content: 73.55
Gene sequence:
>813_bases GTGACTGGCAGCGTTGTGACTGGCGGCGTGGGCCGTGAGGCGATCGAGGCCGCCGTCGCGCGGCTCGACCGGGCGGCCGT CGAGCACGTTCCGTGCGCGCCGGTCGCCGACCTGATCGGCCCGAGTGACATCGACGCCGCCTACGCGGTGCAGTCGGCGC TCACCGCGCTGCGGGTGTCCCGTGGCGCGCGGGTCGTCGGCCGCAAGATCGGTCTCACCTCGCCGGCCGTCCAACGCCAG GTCGGCGTGGACCGGCCCGACTTCGGCGTGCTCTTCGACGACATGAACTACGCCTCGGGCGCCACGGTGCCGTTCGGTCG GCTGCTGCAGCCCAGAGCCGAGGCCGAGATCGCCTTCATCCTCGCCGCGGACATCGTCGACCCGCAGCCCGCCGCCGTCC GGGCGGCGGTCGGCAGCGCGGTCGCGGCGATCGAGGTCGTCGACAGCCGGGTCGCGGACTGGCGGATCCGCATCACCGAC ACGGTGGCGGACAACGCCTCCAGCGGCGTCTTCGTGCTGGGTGACCGGCATCTCACCCTGGACGAGTTCACTCCGGCCGA CGTGTCGATGCGGATGCTGCGCAACGGCGTGACGGCCAGCACCGGGACGGGGCGGGCGTGCCTCGGCGACCCGCTCAGCG CGCTGGCGTGGCTCGCGCGCACGGCACTGGACTTCGGGGATCCGCTCCGGGGCGGCGACATCGTCCTGTCCGGGGCGCTC GGTCCGCTGGCCCCCATCGAGCCCGGCGACGTGATCCAAGCCGAGGTCGGCCCCCTGGGCCCGGTAACGGCGACGTTCGA GAAGGAAGGCTGA
Upstream 100 bases:
>100_bases CCCGAGCTGATCGCCGGCTTCGCCATGCGGACGGCCTTCCCGCGATGAGGCCGGCGTCCACCCGCGGGCGGTGCTCGCCC CGACGATTCCGAGGTGCCGC
Downstream 100 bases:
>100_bases AACCGTGCAGCAGGTGGCGATCATCGGGTCGGGGAACATCGGCACCGACCTCCTGATCAAGATCAAGCGAAGGTCCGAGT CGCTGAGCGTGGCGGCCATG
Product: 4-oxalocrotonate decarboxylase
Products: NA
Alternate protein names: 2-hydroxypentadienoic acid hydratase 2 [H]
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MTGSVVTGGVGREAIEAAVARLDRAAVEHVPCAPVADLIGPSDIDAAYAVQSALTALRVSRGARVVGRKIGLTSPAVQRQ VGVDRPDFGVLFDDMNYASGATVPFGRLLQPRAEAEIAFILAADIVDPQPAAVRAAVGSAVAAIEVVDSRVADWRIRITD TVADNASSGVFVLGDRHLTLDEFTPADVSMRMLRNGVTASTGTGRACLGDPLSALAWLARTALDFGDPLRGGDIVLSGAL GPLAPIEPGDVIQAEVGPLGPVTATFEKEG
Sequences:
>Translated_270_residues MTGSVVTGGVGREAIEAAVARLDRAAVEHVPCAPVADLIGPSDIDAAYAVQSALTALRVSRGARVVGRKIGLTSPAVQRQ VGVDRPDFGVLFDDMNYASGATVPFGRLLQPRAEAEIAFILAADIVDPQPAAVRAAVGSAVAAIEVVDSRVADWRIRITD TVADNASSGVFVLGDRHLTLDEFTPADVSMRMLRNGVTASTGTGRACLGDPLSALAWLARTALDFGDPLRGGDIVLSGAL GPLAPIEPGDVIQAEVGPLGPVTATFEKEG >Mature_269_residues TGSVVTGGVGREAIEAAVARLDRAAVEHVPCAPVADLIGPSDIDAAYAVQSALTALRVSRGARVVGRKIGLTSPAVQRQV GVDRPDFGVLFDDMNYASGATVPFGRLLQPRAEAEIAFILAADIVDPQPAAVRAAVGSAVAAIEVVDSRVADWRIRITDT VADNASSGVFVLGDRHLTLDEFTPADVSMRMLRNGVTASTGTGRACLGDPLSALAWLARTALDFGDPLRGGDIVLSGALG PLAPIEPGDVIQAEVGPLGPVTATFEKEG
Specific function: Catalyzes the conversion of 2-hydroxypentadienoic acid (enolic form of 2-oxopent-4-enoate) to 4-hydroxy-2-ketopentanoic acid [H]
COG id: COG3971
COG function: function code Q; 2-keto-4-pentenoate hydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hydratase/decarboxylase family. MhpD subfamily [H]
Homologues:
Organism=Escherichia coli, GI87081722, Length=260, Percent_Identity=46.9230769230769, Blast_Score=224, Evalue=4e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002529 - InterPro: IPR011234 [H]
Pfam domain/function: PF01557 FAA_hydrolase [H]
EC number: =4.2.1.80 [H]
Molecular weight: Translated: 27786; Mature: 27655
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGSVVTGGVGREAIEAAVARLDRAAVEHVPCAPVADLIGPSDIDAAYAVQSALTALRVS CCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHH RGARVVGRKIGLTSPAVQRQVGVDRPDFGVLFDDMNYASGATVPFGRLLQPRAEAEIAFI CCCHHHHHHCCCCCHHHHHHHCCCCCCCCEEEECCCCCCCCCCCHHHHHCCCCCCEEEEE LAADIVDPQPAAVRAAVGSAVAAIEVVDSRVADWRIRITDTVADNASSGVFVLGDRHLTL EEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCEEEEECCEEEC DEFTPADVSMRMLRNGVTASTGTGRACLGDPLSALAWLARTALDFGDPLRGGDIVLSGAL CCCCCHHHHHHHHHCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCC GPLAPIEPGDVIQAEVGPLGPVTATFEKEG CCCCCCCCCCEEEECCCCCCCEEEECCCCC >Mature Secondary Structure TGSVVTGGVGREAIEAAVARLDRAAVEHVPCAPVADLIGPSDIDAAYAVQSALTALRVS CCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHH RGARVVGRKIGLTSPAVQRQVGVDRPDFGVLFDDMNYASGATVPFGRLLQPRAEAEIAFI CCCHHHHHHCCCCCHHHHHHHCCCCCCCCEEEECCCCCCCCCCCHHHHHCCCCCCEEEEE LAADIVDPQPAAVRAAVGSAVAAIEVVDSRVADWRIRITDTVADNASSGVFVLGDRHLTL EEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCEEEEECCEEEC DEFTPADVSMRMLRNGVTASTGTGRACLGDPLSALAWLARTALDFGDPLRGGDIVLSGAL CCCCCHHHHHHHHHCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCC GPLAPIEPGDVIQAEVGPLGPVTATFEKEG CCCCCCCCCCEEEECCCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA