| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316507
Identifier: 158316507
GI number: 158316507
Start: 5663504
End: 5664694
Strand: Reverse
Name: 158316507
Synonym: Franean1_4742
Alternate gene names: NA
Gene position: 5664694-5663504 (Counterclockwise)
Preceding gene: 158316508
Following gene: 158316499
Centisome position: 63.07
GC content: 67.76
Gene sequence:
>1191_bases ATGCCCACCAACGACATCCCGGTGTTCGACGCCGACAACCACCTGTACGAGACCAAGGACGCGCTGACGAAGTTCCTCCC GGCCCGCTACAAGGGCGCCGTCGACTACGTCGACGTCCACGGCCGGACGAAGATCGTGGTCCGGGGGCAGATCAGCGACT ACATCCCGAATCCGACCTTCGACGTGGTCGCCCGCCCGGGCGCGCAGGAGGACTACTACCGGCACGGCAACCCCGAGGGC AAGTCCTACCGGGAGATCTTCGGCGCGCCGGTGCGCTGCATCGACGCCTGGCGGGAGCCGGCCGCCCGGCTGAAGCTCAT GGACGAGCAGGGCCTGGACCGCACCCTGATGTTCCCGACGCTGGCCAGCCTCATCGAGGAGCGGATGCGGGACGACCCGG ACCTGGTCCATGCCGTCATCCACTCGCTCAACGAGTGGCTGTACGAGACCTGGCAGTTCAACTACGAGGGCCTTGACCGC ATCTTCACCACCCCGGTGATCTCCCTGCCGATCGTGGAGAAGGCGATCGAGGAACTGGAGTGGGTGCTGGAGCGGGGTGC CCGGGTGATCCTCATCCGTCCGGCACCGGTACCCGGCCTGCGCGGCGCGCGCTCGTTCGGGCTGCCGGAGTTCGACCCGT TCTGGGAGCGGGTGCAGGAGGCCGACATCCTGGTCACGCTGCACTCGTCGGACAGCGGCTACGACCGGTACTACAGCGAC TGGACGGGCACCAGCTCCGAGATGCTGCCGTTCAAGCCCAGCGCGTTCCGGATGCTGCAGGCCTGGCGCCCGGTGGAGGA CGCGGTGGCGGCGCTGGTCTGCCACGGCGCGCTGTCCCGGTTCCCCCGGCTGAAGATCGCCGTGGTCGAGAACGGCAGCA GCTGGGTCGCACCGCTGCTGCTGTCCATCAGGGACCTCTACAAGAAGCTGCCGCAGGACTTCGCGGAGGACCCGATCGAG GTCATCAAGCGGAACATCAACATCAGCCCGTTCTGGGAGGAGGACCTGGGCGCGCTCGCCGAGCTCATCGGGGAGGACCG GGTGCTGTTCGGCTCCGACTACCCGCATCCCGAGGGGCTTGCGAGCCCGCTGACCTACCTCGACGAGCTCAAGCACCTGC CCGAGGCGACCACCCGCAAGATCATGGGCGGCAACCTCGCTCGGCTGATGAACATCTCGGTCCCGGCCTAG
Upstream 100 bases:
>100_bases GATGCCCGCAGGGCGCGTTCATCGCTCCGCCGTTTCCGCGTTTCCTTTTCTCTGTGTCATACCCCCGCATGCTGCTTTTC GTGTGCCCGAGGAGGCCATG
Downstream 100 bases:
>100_bases CCGGACCGGCTCCCCGGGGACGGATCACGGACCCGTCCCCGGGACACCTCGCAGGGCGGCGCTCCCACCGGGGTGGGAGC GCCGCCCTGCGAGGACGCCG
Product: amidohydrolase 2
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MPTNDIPVFDADNHLYETKDALTKFLPARYKGAVDYVDVHGRTKIVVRGQISDYIPNPTFDVVARPGAQEDYYRHGNPEG KSYREIFGAPVRCIDAWREPAARLKLMDEQGLDRTLMFPTLASLIEERMRDDPDLVHAVIHSLNEWLYETWQFNYEGLDR IFTTPVISLPIVEKAIEELEWVLERGARVILIRPAPVPGLRGARSFGLPEFDPFWERVQEADILVTLHSSDSGYDRYYSD WTGTSSEMLPFKPSAFRMLQAWRPVEDAVAALVCHGALSRFPRLKIAVVENGSSWVAPLLLSIRDLYKKLPQDFAEDPIE VIKRNINISPFWEEDLGALAELIGEDRVLFGSDYPHPEGLASPLTYLDELKHLPEATTRKIMGGNLARLMNISVPA
Sequences:
>Translated_396_residues MPTNDIPVFDADNHLYETKDALTKFLPARYKGAVDYVDVHGRTKIVVRGQISDYIPNPTFDVVARPGAQEDYYRHGNPEG KSYREIFGAPVRCIDAWREPAARLKLMDEQGLDRTLMFPTLASLIEERMRDDPDLVHAVIHSLNEWLYETWQFNYEGLDR IFTTPVISLPIVEKAIEELEWVLERGARVILIRPAPVPGLRGARSFGLPEFDPFWERVQEADILVTLHSSDSGYDRYYSD WTGTSSEMLPFKPSAFRMLQAWRPVEDAVAALVCHGALSRFPRLKIAVVENGSSWVAPLLLSIRDLYKKLPQDFAEDPIE VIKRNINISPFWEEDLGALAELIGEDRVLFGSDYPHPEGLASPLTYLDELKHLPEATTRKIMGGNLARLMNISVPA >Mature_395_residues PTNDIPVFDADNHLYETKDALTKFLPARYKGAVDYVDVHGRTKIVVRGQISDYIPNPTFDVVARPGAQEDYYRHGNPEGK SYREIFGAPVRCIDAWREPAARLKLMDEQGLDRTLMFPTLASLIEERMRDDPDLVHAVIHSLNEWLYETWQFNYEGLDRI FTTPVISLPIVEKAIEELEWVLERGARVILIRPAPVPGLRGARSFGLPEFDPFWERVQEADILVTLHSSDSGYDRYYSDW TGTSSEMLPFKPSAFRMLQAWRPVEDAVAALVCHGALSRFPRLKIAVVENGSSWVAPLLLSIRDLYKKLPQDFAEDPIEV IKRNINISPFWEEDLGALAELIGEDRVLFGSDYPHPEGLASPLTYLDELKHLPEATTRKIMGGNLARLMNISVPA
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44992; Mature: 44861
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTNDIPVFDADNHLYETKDALTKFLPARYKGAVDYVDVHGRTKIVVRGQISDYIPNPTF CCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEEECHHHCCCCCCH DVVARPGAQEDYYRHGNPEGKSYREIFGAPVRCIDAWREPAARLKLMDEQGLDRTLMFPT HEEECCCCCCCHHHCCCCCCCHHHHHHCCHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHH LASLIEERMRDDPDLVHAVIHSLNEWLYETWQFNYEGLDRIFTTPVISLPIVEKAIEELE HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHH WVLERGARVILIRPAPVPGLRGARSFGLPEFDPFWERVQEADILVTLHSSDSGYDRYYSD HHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCHHHHCC WTGTSSEMLPFKPSAFRMLQAWRPVEDAVAALVCHGALSRFPRLKIAVVENGSSWVAPLL CCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHH LSIRDLYKKLPQDFAEDPIEVIKRNINISPFWEEDLGALAELIGEDRVLFGSDYPHPEGL HHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCH ASPLTYLDELKHLPEATTRKIMGGNLARLMNISVPA HHHHHHHHHHHHCCHHHHHHHHCCCHHHHEECCCCC >Mature Secondary Structure PTNDIPVFDADNHLYETKDALTKFLPARYKGAVDYVDVHGRTKIVVRGQISDYIPNPTF CCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEEECHHHCCCCCCH DVVARPGAQEDYYRHGNPEGKSYREIFGAPVRCIDAWREPAARLKLMDEQGLDRTLMFPT HEEECCCCCCCHHHCCCCCCCHHHHHHCCHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHH LASLIEERMRDDPDLVHAVIHSLNEWLYETWQFNYEGLDRIFTTPVISLPIVEKAIEELE HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHH WVLERGARVILIRPAPVPGLRGARSFGLPEFDPFWERVQEADILVTLHSSDSGYDRYYSD HHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCHHHHCC WTGTSSEMLPFKPSAFRMLQAWRPVEDAVAALVCHGALSRFPRLKIAVVENGSSWVAPLL CCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHH LSIRDLYKKLPQDFAEDPIEVIKRNINISPFWEEDLGALAELIGEDRVLFGSDYPHPEGL HHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCH ASPLTYLDELKHLPEATTRKIMGGNLARLMNISVPA HHHHHHHHHHHHCCHHHHHHHHCCCHHHHEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA