| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is fdx [C]
Identifier: 158316482
GI number: 158316482
Start: 5631685
End: 5632035
Strand: Reverse
Name: fdx [C]
Synonym: Franean1_4717
Alternate gene names: 158316482
Gene position: 5632035-5631685 (Counterclockwise)
Preceding gene: 158316483
Following gene: 158316481
Centisome position: 62.7
GC content: 70.09
Gene sequence:
>351_bases GTGGTACGCATCGACCCCGTCGGCGCCGACCTCGAACTCGAACCCGGAGAGACGATCATCGAGGCCGCGTGGCGACTCGG GTACCACTGGCCCACCGTCTGCCACGGCCAGGCAACCTGCACGGTCTGCCACCTCGAGGTACTCAGCGGCATCGAACACC TGACACCCCCCGACGACGACGAACAAGACGCCCTCGAACACCGACTCCCCGGCGCACACCGCCGTGACCTCACCCGGCTC CGGCTCGCCTGCCGAGCGCAGGCAACCGGCGACGTCACCGTGCGCAAGAACGGCGTGCGACGCCGCCGGCCCGTACCGAC CGGCCCATTCCCGCACGTCGTCGACGAGTAG
Upstream 100 bases:
>100_bases TCGTGTTCTCCTACATCGGCATGAAACACGCCGCACACGCCGCCTCCGGGGACCGAGCGGTCACGTGACCGCAGAACGGA GCGCACGGCCCCGGGGGCCA
Downstream 100 bases:
>100_bases GAGCGCTGACCTATGGAGCACCCTCATGCAGGTGGCGGTCGGGTGACCGGTGAGGACAAGCCCGTACCCGTGGTCGATGA CGACAGTCGCGATTTCTGGT
Product: ferredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MVRIDPVGADLELEPGETIIEAAWRLGYHWPTVCHGQATCTVCHLEVLSGIEHLTPPDDDEQDALEHRLPGAHRRDLTRL RLACRAQATGDVTVRKNGVRRRRPVPTGPFPHVVDE
Sequences:
>Translated_116_residues MVRIDPVGADLELEPGETIIEAAWRLGYHWPTVCHGQATCTVCHLEVLSGIEHLTPPDDDEQDALEHRLPGAHRRDLTRL RLACRAQATGDVTVRKNGVRRRRPVPTGPFPHVVDE >Mature_116_residues MVRIDPVGADLELEPGETIIEAAWRLGYHWPTVCHGQATCTVCHLEVLSGIEHLTPPDDDEQDALEHRLPGAHRRDLTRL RLACRAQATGDVTVRKNGVRRRRPVPTGPFPHVVDE
Specific function: Ferredoxin Are Iron-Sulfur Proteins That Transfer Electrons In A Wide Variety Of Metabolic Reactions. Although The Function Of This Ferredoxin Is Unknown It Is Probable That It Has A Role As A Cellular Electron Transfer Protein. Involved In The In Vivo As
COG id: COG0633
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12969; Mature: 12969
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRIDPVGADLELEPGETIIEAAWRLGYHWPTVCHGQATCTVCHLEVLSGIEHLTPPDDD CEEECCCCCCEEECCCHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCCC EQDALEHRLPGAHRRDLTRLRLACRAQATGDVTVRKNGVRRRRPVPTGPFPHVVDE HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVRIDPVGADLELEPGETIIEAAWRLGYHWPTVCHGQATCTVCHLEVLSGIEHLTPPDDD CEEECCCCCCEEECCCHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCCC EQDALEHRLPGAHRRDLTRLRLACRAQATGDVTVRKNGVRRRRPVPTGPFPHVVDE HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: 2Fe-2S Cluster. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA