| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316467
Identifier: 158316467
GI number: 158316467
Start: 5617369
End: 5618493
Strand: Reverse
Name: 158316467
Synonym: Franean1_4702
Alternate gene names: NA
Gene position: 5618493-5617369 (Counterclockwise)
Preceding gene: 158316468
Following gene: 158316466
Centisome position: 62.55
GC content: 67.38
Gene sequence:
>1125_bases ATGGATTACAAGGTCATCTCGGCGGACAACCACATCATCGAGGCGCCGCACACGTTCACCACCTATCTGCCGAAGGAGTA CCGGGACCGGGCGCCGCGCATCCTGCGCGGCGCGGACGGCGGCGACGGCTGGAGCTTCGACGGCAAGCCGCCGAGCAAGA CGTTCGGGCTGAACGCCGTAGCCGGCCGCCCGTTCGAGGACTACAAGGCCAGCGGCCTGACCGTCGATGAGATCCTCCCG GGCAACTACGACGGCGCCGCCCACCTGAAGGACATGGACGCCGACGGCGTGGACGCCGCCACCATCTACCCGATGGCCTC TCTCACGTCGTACACGCTCGACGATCGACCCTTCGCCCTCGCCATCCTGCGGGCCTACAACGACTGGCTGCTCGACGAGT TCTGCGCCGTCAACCCGCAGCGGCTCATCGGTCTGCCGCTCCTGCCGGTCGACGACGGCATGGACGTCCTGCTCGCCGAA CTCGAGCGGGTGGCTGCCAAGGGTGCCAAGGGCGCCTTCCTCCCCTACTGGAGCGAGCGCCCGTACTACGACAGCTACTA CGAGCCGCTCTGGACGGCGGCCGAGCAGGCACCACTGACGCTGTGCATCCACCGAACCATGGGCGGGAAGGAACCGGCGG GGCAGGCCACCCCAAGGCCGGAGGCCGCCGCGGGTGTCAACCTCGCCGGTATCGTCCAGCGGTTCTTCACCGGCGTCGCG CCGTTCTCCCAGCTGACCTTCACCGGTGTGTTCGAACGGCACCCCGGCCTGAAGTTCGTCGACGCCGAGGTCAACTTCGG GTGGCTGCGGTTCTGGGCCCTGATGATGGACCAGGAGTTCGAGCGCCAGAAGCACTGGGCCAACCCGCCGCTGCACACCC CGCCCCACGAGTTCATCGGCAAGAACCTTTTCGTCAGCGTGCTCGACGACTTCGTCGGCTTCGAAGACGCCAAGCGCGAC CCGCTCGTGGCGTCGGCCGCCATGTTCTCCATCGACTACCCGCACAGCGGGACGCTGTTCCCGAAGACCCAGCAGTACAT CGCCGAGCTGACCCCAGGCCTCGACGACGACCGCAAGCACGCCATCCTCGCGGGGAACGCTGTGCGGGTGTTCAACCTCG CATGA
Upstream 100 bases:
>100_bases GCCAGCACACGGAGGAGATCCTCCTGGCATCTGGCTATTCGTGGGACGACATCACCGCCCTCAAGGAGCAGGGCGCCATC ATCTGAGAGGGGAACGCACC
Downstream 100 bases:
>100_bases TCGATCCGAACCTCGACCACGTCGGCCTCGTGGTGCCGGAGCTCGAGCCGGCGATGGCGGCGCTGTCCGCCCAGCTCGGC CTGGAGTGGATGGGGATCTT
Product: amidohydrolase 2
Products: NA
Alternate protein names: Amidase; Barh Protein; TIM-Barrel Fold Metal-Dependent Hydrolase; Metal-Dependent Amidohydrolase; Amidohydrolase 2 Protein; Amidohydrolase Family Protein; Hydrolase; Aminocarboxymuconate-Semialdehyde Decarboxylase; Amidohydrolase Family; Minocarboxymuconate-Semialdehyde Decarboxylase.
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MDYKVISADNHIIEAPHTFTTYLPKEYRDRAPRILRGADGGDGWSFDGKPPSKTFGLNAVAGRPFEDYKASGLTVDEILP GNYDGAAHLKDMDADGVDAATIYPMASLTSYTLDDRPFALAILRAYNDWLLDEFCAVNPQRLIGLPLLPVDDGMDVLLAE LERVAAKGAKGAFLPYWSERPYYDSYYEPLWTAAEQAPLTLCIHRTMGGKEPAGQATPRPEAAAGVNLAGIVQRFFTGVA PFSQLTFTGVFERHPGLKFVDAEVNFGWLRFWALMMDQEFERQKHWANPPLHTPPHEFIGKNLFVSVLDDFVGFEDAKRD PLVASAAMFSIDYPHSGTLFPKTQQYIAELTPGLDDDRKHAILAGNAVRVFNLA
Sequences:
>Translated_374_residues MDYKVISADNHIIEAPHTFTTYLPKEYRDRAPRILRGADGGDGWSFDGKPPSKTFGLNAVAGRPFEDYKASGLTVDEILP GNYDGAAHLKDMDADGVDAATIYPMASLTSYTLDDRPFALAILRAYNDWLLDEFCAVNPQRLIGLPLLPVDDGMDVLLAE LERVAAKGAKGAFLPYWSERPYYDSYYEPLWTAAEQAPLTLCIHRTMGGKEPAGQATPRPEAAAGVNLAGIVQRFFTGVA PFSQLTFTGVFERHPGLKFVDAEVNFGWLRFWALMMDQEFERQKHWANPPLHTPPHEFIGKNLFVSVLDDFVGFEDAKRD PLVASAAMFSIDYPHSGTLFPKTQQYIAELTPGLDDDRKHAILAGNAVRVFNLA >Mature_374_residues MDYKVISADNHIIEAPHTFTTYLPKEYRDRAPRILRGADGGDGWSFDGKPPSKTFGLNAVAGRPFEDYKASGLTVDEILP GNYDGAAHLKDMDADGVDAATIYPMASLTSYTLDDRPFALAILRAYNDWLLDEFCAVNPQRLIGLPLLPVDDGMDVLLAE LERVAAKGAKGAFLPYWSERPYYDSYYEPLWTAAEQAPLTLCIHRTMGGKEPAGQATPRPEAAAGVNLAGIVQRFFTGVA PFSQLTFTGVFERHPGLKFVDAEVNFGWLRFWALMMDQEFERQKHWANPPLHTPPHEFIGKNLFVSVLDDFVGFEDAKRD PLVASAAMFSIDYPHSGTLFPKTQQYIAELTPGLDDDRKHAILAGNAVRVFNLA
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41506; Mature: 41506
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYKVISADNHIIEAPHTFTTYLPKEYRDRAPRILRGADGGDGWSFDGKPPSKTFGLNAV CCEEEEECCCCEEECCCHHHHHCCHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC AGRPFEDYKASGLTVDEILPGNYDGAAHLKDMDADGVDAATIYPMASLTSYTLDDRPFAL CCCCHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHCCCCCCCCHHH AILRAYNDWLLDEFCAVNPQRLIGLPLLPVDDGMDVLLAELERVAAKGAKGAFLPYWSER HHHHHHHHHHHHHHHCCCHHHHHCCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC PYYDSYYEPLWTAAEQAPLTLCIHRTMGGKEPAGQATPRPEAAAGVNLAGIVQRFFTGVA CCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHCCC PFSQLTFTGVFERHPGLKFVDAEVNFGWLRFWALMMDQEFERQKHWANPPLHTPPHEFIG CHHHHHEEEHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH KNLFVSVLDDFVGFEDAKRDPLVASAAMFSIDYPHSGTLFPKTQQYIAELTPGLDDDRKH HHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCC AILAGNAVRVFNLA EEEECCEEEEEECC >Mature Secondary Structure MDYKVISADNHIIEAPHTFTTYLPKEYRDRAPRILRGADGGDGWSFDGKPPSKTFGLNAV CCEEEEECCCCEEECCCHHHHHCCHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC AGRPFEDYKASGLTVDEILPGNYDGAAHLKDMDADGVDAATIYPMASLTSYTLDDRPFAL CCCCHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHCCCCCCCCHHH AILRAYNDWLLDEFCAVNPQRLIGLPLLPVDDGMDVLLAELERVAAKGAKGAFLPYWSER HHHHHHHHHHHHHHHCCCHHHHHCCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC PYYDSYYEPLWTAAEQAPLTLCIHRTMGGKEPAGQATPRPEAAAGVNLAGIVQRFFTGVA CCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHCCC PFSQLTFTGVFERHPGLKFVDAEVNFGWLRFWALMMDQEFERQKHWANPPLHTPPHEFIG CHHHHHEEEHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH KNLFVSVLDDFVGFEDAKRDPLVASAAMFSIDYPHSGTLFPKTQQYIAELTPGLDDDRKH HHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCC AILAGNAVRVFNLA EEEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA