Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158316466

Identifier: 158316466

GI number: 158316466

Start: 5616941

End: 5617372

Strand: Reverse

Name: 158316466

Synonym: Franean1_4701

Alternate gene names: NA

Gene position: 5617372-5616941 (Counterclockwise)

Preceding gene: 158316467

Following gene: 158316465

Centisome position: 62.54

GC content: 67.36

Gene sequence:

>432_bases
ATGATCGATCCGAACCTCGACCACGTCGGCCTCGTGGTGCCGGAGCTCGAGCCGGCGATGGCGGCGCTGTCCGCCCAGCT
CGGCCTGGAGTGGATGGGGATCTTCGAGCCCACGCTGGCGATGCGCGACGCCGAGCACGGCACCCGTGACGTCCAGCTCA
AGATTGCCGTCACGACGCAGTACCCGCGCCTGGAGTTGATCCAGATGATTCCGGACTCGCCGTGGGCGCTTGCCGAGAGC
CGCATGCTCCTGCACCACCTCGCCTACTACGCGGGCGACCTCGCGGCGGACAGCAGCCGGGTGGCCGGGCCGTGCCCGAT
CGAGATCTATGGCGTCGGCGCGGACGGGAAGACCCCGAAGAGGTTCACCTACCATCTGCACAACGGGCTGCGGTTCGAAC
TCCTGGATCAGCGTTCCGGTAGGGCAGAGTAA

Upstream 100 bases:

>100_bases
CGAAGACCCAGCAGTACATCGCCGAGCTGACCCCAGGCCTCGACGACGACCGCAAGCACGCCATCCTCGCGGGGAACGCT
GTGCGGGTGTTCAACCTCGC

Downstream 100 bases:

>100_bases
GAGCGGTGACACAGCCGACGCCGACACAGAGTTCGCCTGCTCGCAGCAACGTGCAGGCACTCGTCGATACCATCCGCGGA
CGGATCATCCGCGGCCAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MIDPNLDHVGLVVPELEPAMAALSAQLGLEWMGIFEPTLAMRDAEHGTRDVQLKIAVTTQYPRLELIQMIPDSPWALAES
RMLLHHLAYYAGDLAADSSRVAGPCPIEIYGVGADGKTPKRFTYHLHNGLRFELLDQRSGRAE

Sequences:

>Translated_143_residues
MIDPNLDHVGLVVPELEPAMAALSAQLGLEWMGIFEPTLAMRDAEHGTRDVQLKIAVTTQYPRLELIQMIPDSPWALAES
RMLLHHLAYYAGDLAADSSRVAGPCPIEIYGVGADGKTPKRFTYHLHNGLRFELLDQRSGRAE
>Mature_143_residues
MIDPNLDHVGLVVPELEPAMAALSAQLGLEWMGIFEPTLAMRDAEHGTRDVQLKIAVTTQYPRLELIQMIPDSPWALAES
RMLLHHLAYYAGDLAADSSRVAGPCPIEIYGVGADGKTPKRFTYHLHNGLRFELLDQRSGRAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15848; Mature: 15848

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDPNLDHVGLVVPELEPAMAALSAQLGLEWMGIFEPTLAMRDAEHGTRDVQLKIAVTTQ
CCCCCCCCEEEEECCCCHHHHHHHHHCCCEEEEECCCHHHHHCCCCCCEEEEEEEEEECC
YPRLELIQMIPDSPWALAESRMLLHHLAYYAGDLAADSSRVAGPCPIEIYGVGADGKTPK
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCC
RFTYHLHNGLRFELLDQRSGRAE
EEEEEECCCEEEEEECCCCCCCC
>Mature Secondary Structure
MIDPNLDHVGLVVPELEPAMAALSAQLGLEWMGIFEPTLAMRDAEHGTRDVQLKIAVTTQ
CCCCCCCCEEEEECCCCHHHHHHHHHCCCEEEEECCCHHHHHCCCCCCEEEEEEEEEECC
YPRLELIQMIPDSPWALAESRMLLHHLAYYAGDLAADSSRVAGPCPIEIYGVGADGKTPK
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCC
RFTYHLHNGLRFELLDQRSGRAE
EEEEEECCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA