| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316455
Identifier: 158316455
GI number: 158316455
Start: 5604928
End: 5605620
Strand: Reverse
Name: 158316455
Synonym: Franean1_4690
Alternate gene names: NA
Gene position: 5605620-5604928 (Counterclockwise)
Preceding gene: 158316460
Following gene: 158316454
Centisome position: 62.41
GC content: 73.88
Gene sequence:
>693_bases ATGACCTGGCGCGGGCGCCATGCCGCACCAGGTCCGGCCGGTTCGCCGGATTCCCGTCCGATGGTCTGGGCTGGCAGACT TGCGGTGATGGATCGTGGGGGCAGTGAGTGTGGTGGCGCGCGGGTGCGGCGGATCGGGCTCGGTGACGCCGAGGTTCTGC GGGCGGTGCGGCTGGCGGCCCTAACCGACGCGCCGGGGGCGTTCTGGCGTACCTATGCCGATGAAGCGACCCGGCCGGGA ACGGACTGGGTGGAGCGGGCCCGGGTGGGCGCGTCCGGAGACGCGGACGTGACGTTCCTGGCCGAGCGGGATGGCGCGGT GGTCGGTTCGGTGTCGGCGCACACCCCGTCGGTGGCGCGGGACCTGCGGGAGCTGGCGGCGATGTGGGTGGCGCCGGTGG CTCGAGGCTCGGGCGCGGCGGACGCTTTGCTGCTGGCGGTGCTGGACTGGGCCCGGGCGGCTGGCGCGGCCGGGGTCCGG CTGTGGGTGGTGCCGTCGAACGGGCCGGCCCGGCGGGTGTATGAGCGGCACGGGTTCGTGGTGGTCGGTGACCTGGAGCC GGTCACGGATGATCCGTCGGTGAAGGTGTATGTGCCGATGGTGCTGACGTTGGACGCGGCTGCCGCCGCGGATGCGGGTT ACCGGGCGCGCGCCGCCTCACCCTGGTCGGCGCCGACATCGGGTGAGGACTGA
Upstream 100 bases:
>100_bases CACGGGTGCAGTGTCCGGAGTCCTCGACGCGCGAAAGCAGCGCCGTTGAATTCCGGCGGCGAGGAGACGGGATTCGTTTT CGGAGACGACGCGACCCTGG
Downstream 100 bases:
>100_bases GTGGATGGCGGGAAAGTTCACGCCGGACAAGGACGTCGAAGGCTAGCGGGACGTCATCTACTCCGGCTGGAGTACGGCGG GCAGCATGTACTGCGCCATA
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MTWRGRHAAPGPAGSPDSRPMVWAGRLAVMDRGGSECGGARVRRIGLGDAEVLRAVRLAALTDAPGAFWRTYADEATRPG TDWVERARVGASGDADVTFLAERDGAVVGSVSAHTPSVARDLRELAAMWVAPVARGSGAADALLLAVLDWARAAGAAGVR LWVVPSNGPARRVYERHGFVVVGDLEPVTDDPSVKVYVPMVLTLDAAAAADAGYRARAASPWSAPTSGED
Sequences:
>Translated_230_residues MTWRGRHAAPGPAGSPDSRPMVWAGRLAVMDRGGSECGGARVRRIGLGDAEVLRAVRLAALTDAPGAFWRTYADEATRPG TDWVERARVGASGDADVTFLAERDGAVVGSVSAHTPSVARDLRELAAMWVAPVARGSGAADALLLAVLDWARAAGAAGVR LWVVPSNGPARRVYERHGFVVVGDLEPVTDDPSVKVYVPMVLTLDAAAAADAGYRARAASPWSAPTSGED >Mature_229_residues TWRGRHAAPGPAGSPDSRPMVWAGRLAVMDRGGSECGGARVRRIGLGDAEVLRAVRLAALTDAPGAFWRTYADEATRPGT DWVERARVGASGDADVTFLAERDGAVVGSVSAHTPSVARDLRELAAMWVAPVARGSGAADALLLAVLDWARAAGAAGVRL WVVPSNGPARRVYERHGFVVVGDLEPVTDDPSVKVYVPMVLTLDAAAAADAGYRARAASPWSAPTSGED
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23978; Mature: 23847
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWRGRHAAPGPAGSPDSRPMVWAGRLAVMDRGGSECGGARVRRIGLGDAEVLRAVRLAA CCCCCCCCCCCCCCCCCCCCEEEECEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHH LTDAPGAFWRTYADEATRPGTDWVERARVGASGDADVTFLAERDGAVVGSVSAHTPSVAR HCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEEEECCCEEEEECCCCCCHHHH DLRELAAMWVAPVARGSGAADALLLAVLDWARAAGAAGVRLWVVPSNGPARRVYERHGFV HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHCCEE VVGDLEPVTDDPSVKVYVPMVLTLDAAAAADAGYRARAASPWSAPTSGED EEECCCCCCCCCCEEEEEEEEEEECHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TWRGRHAAPGPAGSPDSRPMVWAGRLAVMDRGGSECGGARVRRIGLGDAEVLRAVRLAA CCCCCCCCCCCCCCCCCCCEEEECEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHH LTDAPGAFWRTYADEATRPGTDWVERARVGASGDADVTFLAERDGAVVGSVSAHTPSVAR HCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEEEECCCEEEEECCCCCCHHHH DLRELAAMWVAPVARGSGAADALLLAVLDWARAAGAAGVRLWVVPSNGPARRVYERHGFV HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHCCEE VVGDLEPVTDDPSVKVYVPMVLTLDAAAAADAGYRARAASPWSAPTSGED EEECCCCCCCCCCEEEEEEEEEEECHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA