Click here to switch to the map view.

The map label for this gene is 158316460

Identifier: 158316460

GI number: 158316460

Start: 5609014

End: 5609661

Strand: Reverse

Name: 158316460

Synonym: Franean1_4695

Alternate gene names: NA

Gene position: 5609661-5609014 (Counterclockwise)

Preceding gene: 158316463

Following gene: 158316455

Centisome position: 62.45

GC content: 68.21

Gene sequence:

>648_bases
ATGCAGAACGGAGTCGCACCCACCCGGCGCGGGGCGGGGCGCCCCACCCGCGAGCAGGCCGAAGCACGCCACGAGGAGCT
GCTCGACACCGCGCTCGACCTGTTCCTGGAGCGCGGCTTCGAGCTGGCGACGATCGAGATGATCGCCGCCCGGGTCAACA
TGACCAAGCGAACGGTCTACGCCCGCTACCCCGACAAGGCCGCGCTGTTCCGTGCGGCGGTCCAGCGCGCCATCGAGCGC
CAGATCGTGCCCCAGGCCGTGCTGGAGGGCCTGGACAACGGCGACCTGGGCGAGACGCTCGAGGCGATCGCCCGACTACG
GATCACTCAGGTGGCGACACCCAACGGCCTGCGCCTGCAGCGGATCATCAACACCGAGAGCTACCGCTTCCCCGAGATCT
TCACCATCAGCTTCGAGCAGAGCGGCAGGCCGGTGATCGAGTTCGTCGCCGGCGTGCTCGAGCGTGCGGTCGCCGACGGC
ACGATCGCGCCCACCAACCCCAGACTCGCCGCATCCGTCTTTATGAGCATGTTGGTCAGCGGCCCGGTGAGGACGATCGT
GAGTGGCCACATGCCGACGCAGAACGAACTGGACGAGAGGATCCAGTTCTCCGTGCGCCTGCTGCTCAACGGCCTCCGGC
CACGCTGA

Upstream 100 bases:

>100_bases
CTTACTGTTCGTGTTGGTGGCCGGGTCCGGCTAACGGCACCTGATGCGTATCATTAATCGAACCTGGCGGCGGCGCAAGA
GGGAAGTCGAGCGAGGCGAC

Downstream 100 bases:

>100_bases
GGACGACGAGGCGGTGGAGGTCTTCCATGACTCCACCGCCTTCTCCGGGGTGAAGTCCTAACGCTGGTAGCCGGTCCGCA
GGTCGTCGACGATCCGTGGG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator Tetr Family; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; TetR-Type Transcriptional Regulator; TetR-Family Transcriptional Regulator; Transcriptional Regulator TetR/AcrR Family; Bacterial Regulatory Protein TetR Family Protein; Transcriptional Regulator TetR

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MQNGVAPTRRGAGRPTREQAEARHEELLDTALDLFLERGFELATIEMIAARVNMTKRTVYARYPDKAALFRAAVQRAIER
QIVPQAVLEGLDNGDLGETLEAIARLRITQVATPNGLRLQRIINTESYRFPEIFTISFEQSGRPVIEFVAGVLERAVADG
TIAPTNPRLAASVFMSMLVSGPVRTIVSGHMPTQNELDERIQFSVRLLLNGLRPR

Sequences:

>Translated_215_residues
MQNGVAPTRRGAGRPTREQAEARHEELLDTALDLFLERGFELATIEMIAARVNMTKRTVYARYPDKAALFRAAVQRAIER
QIVPQAVLEGLDNGDLGETLEAIARLRITQVATPNGLRLQRIINTESYRFPEIFTISFEQSGRPVIEFVAGVLERAVADG
TIAPTNPRLAASVFMSMLVSGPVRTIVSGHMPTQNELDERIQFSVRLLLNGLRPR
>Mature_215_residues
MQNGVAPTRRGAGRPTREQAEARHEELLDTALDLFLERGFELATIEMIAARVNMTKRTVYARYPDKAALFRAAVQRAIER
QIVPQAVLEGLDNGDLGETLEAIARLRITQVATPNGLRLQRIINTESYRFPEIFTISFEQSGRPVIEFVAGVLERAVADG
TIAPTNPRLAASVFMSMLVSGPVRTIVSGHMPTQNELDERIQFSVRLLLNGLRPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23922; Mature: 23922

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNGVAPTRRGAGRPTREQAEARHEELLDTALDLFLERGFELATIEMIAARVNMTKRTVY
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEE
ARYPDKAALFRAAVQRAIERQIVPQAVLEGLDNGDLGETLEAIARLRITQVATPNGLRLQ
EECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHH
RIINTESYRFPEIFTISFEQSGRPVIEFVAGVLERAVADGTIAPTNPRLAASVFMSMLVS
HHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHC
GPVRTIVSGHMPTQNELDERIQFSVRLLLNGLRPR
CHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQNGVAPTRRGAGRPTREQAEARHEELLDTALDLFLERGFELATIEMIAARVNMTKRTVY
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEE
ARYPDKAALFRAAVQRAIERQIVPQAVLEGLDNGDLGETLEAIARLRITQVATPNGLRLQ
EECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHH
RIINTESYRFPEIFTISFEQSGRPVIEFVAGVLERAVADGTIAPTNPRLAASVFMSMLVS
HHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHC
GPVRTIVSGHMPTQNELDERIQFSVRLLLNGLRPR
CHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA