Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158316440

Identifier: 158316440

GI number: 158316440

Start: 5583879

End: 5584835

Strand: Reverse

Name: 158316440

Synonym: Franean1_4675

Alternate gene names: NA

Gene position: 5584835-5583879 (Counterclockwise)

Preceding gene: 158316441

Following gene: 158316439

Centisome position: 62.18

GC content: 73.98

Gene sequence:

>957_bases
GTGGCCGCCGACCGCCCCGGGCAGATCACCGACCCGGTGGCCTTCCATGGCGAAGGCCCGGTCTGGAGCCCCGACTGGGG
CGGCCTGCGCTGCGTCGACCTGCTGGCCGGTGACGTCCTCGCCGTCGACACCACGAGCGGCGCGGTCCGCCGCGACCATG
TCGGCGCCGTGGCTGCGGCGCTGCGACCACGAGCCGCGGGTGGGACGGTGCTCGCACTGGAACGCGGCTTCGCGCTCATC
GACCCCGCCGACCCGGACGGCCCCACCGACCCCGCCGGCTCGGACGGCCAGGCCGGCCCGGAAGACTCTGCTGGCTCTGA
AGACCCTGCCGGCCTCACCGCCGGCGTCCGCCGGTACCTCGGGGATCTGTGGGACGCCGACGCGGGGGTCCGGATGAACG
ACGGCGGCTGTGACCCGGACGGCCGCTTCTACTGCGGATCCATGGCCTACGCCGAGACGGCCGGCGCCGGTTCGCTCTAC
CGGCTCGCACCCGACGGCACCGTCAGCGTCGTGCTGACCGGCGTCACCGTCTCCAACGGGCTGGCCTGGAGCCCCGACGG
CGCGAGGGCGTACTACGTCGACTCGCCGACGTCACGGGTGGACGTCTTCGACTACGACTCGGAACGGGGACTGAGTAACC
GTCGGACCCTGCTCACCGTCTCTGCCGACGGGGGCGCGCCTGACGGGCTCACCGTCGACGCCGACGGCTACCTGTGGGTG
GCGCTGTGGGGCGGCGGCGCGGTCCGCCGCTACTCACCCGCCGGCCGGCTCGACGGGATCGTCCCGCTGCCCGTGCCCAG
GGTGACGGCGTGCACCTTCGGCGGCGACCGCCTCGACACGCTCTACATCACCACCTCCCAGGTCGGCACCGATCTCACCC
GGTATCCGGCGGCGGGTGCTGTGTTCGCCCTCGCCCCGGGAGTCCGTGGCCAGCCGGTGCAACCGTTCACGGGCTAG

Upstream 100 bases:

>100_bases
GCCCGTCACGTACCAGTCGCTGCCCGAGCGCCTGCTGCCCGAGCCGCTGCGTGACGGCAATCCCTGGGGGATCCCCCAGG
ACCGCCACGGCGGCTGACCG

Downstream 100 bases:

>100_bases
ATCCGCGTGACTCGCTTCCGCTCTGGTGTCCCGCGGAACACTCGATCAGGGCACGGCACATCGCAGCTGATCAATCTCCG
TGCAACGGGCTGTTAGTCTG

Product: SMP-30/gluconolaconase/LRE domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MAADRPGQITDPVAFHGEGPVWSPDWGGLRCVDLLAGDVLAVDTTSGAVRRDHVGAVAAALRPRAAGGTVLALERGFALI
DPADPDGPTDPAGSDGQAGPEDSAGSEDPAGLTAGVRRYLGDLWDADAGVRMNDGGCDPDGRFYCGSMAYAETAGAGSLY
RLAPDGTVSVVLTGVTVSNGLAWSPDGARAYYVDSPTSRVDVFDYDSERGLSNRRTLLTVSADGGAPDGLTVDADGYLWV
ALWGGGAVRRYSPAGRLDGIVPLPVPRVTACTFGGDRLDTLYITTSQVGTDLTRYPAAGAVFALAPGVRGQPVQPFTG

Sequences:

>Translated_318_residues
MAADRPGQITDPVAFHGEGPVWSPDWGGLRCVDLLAGDVLAVDTTSGAVRRDHVGAVAAALRPRAAGGTVLALERGFALI
DPADPDGPTDPAGSDGQAGPEDSAGSEDPAGLTAGVRRYLGDLWDADAGVRMNDGGCDPDGRFYCGSMAYAETAGAGSLY
RLAPDGTVSVVLTGVTVSNGLAWSPDGARAYYVDSPTSRVDVFDYDSERGLSNRRTLLTVSADGGAPDGLTVDADGYLWV
ALWGGGAVRRYSPAGRLDGIVPLPVPRVTACTFGGDRLDTLYITTSQVGTDLTRYPAAGAVFALAPGVRGQPVQPFTG
>Mature_317_residues
AADRPGQITDPVAFHGEGPVWSPDWGGLRCVDLLAGDVLAVDTTSGAVRRDHVGAVAAALRPRAAGGTVLALERGFALID
PADPDGPTDPAGSDGQAGPEDSAGSEDPAGLTAGVRRYLGDLWDADAGVRMNDGGCDPDGRFYCGSMAYAETAGAGSLYR
LAPDGTVSVVLTGVTVSNGLAWSPDGARAYYVDSPTSRVDVFDYDSERGLSNRRTLLTVSADGGAPDGLTVDADGYLWVA
LWGGGAVRRYSPAGRLDGIVPLPVPRVTACTFGGDRLDTLYITTSQVGTDLTRYPAAGAVFALAPGVRGQPVQPFTG

Specific function: Unknown

COG id: COG3386

COG function: function code G; Gluconolactonase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SMP-30/CGR1 family [H]

Homologues:

Organism=Homo sapiens, GI23111021, Length=314, Percent_Identity=34.7133757961783, Blast_Score=152, Evalue=4e-37,
Organism=Homo sapiens, GI4759036, Length=314, Percent_Identity=34.7133757961783, Blast_Score=152, Evalue=4e-37,
Organism=Drosophila melanogaster, GI24641471, Length=282, Percent_Identity=31.5602836879433, Blast_Score=118, Evalue=4e-27,
Organism=Drosophila melanogaster, GI18860103, Length=282, Percent_Identity=31.5602836879433, Blast_Score=118, Evalue=4e-27,
Organism=Drosophila melanogaster, GI24641469, Length=282, Percent_Identity=31.5602836879433, Blast_Score=118, Evalue=4e-27,
Organism=Drosophila melanogaster, GI45551448, Length=282, Percent_Identity=31.5602836879433, Blast_Score=118, Evalue=5e-27,
Organism=Drosophila melanogaster, GI24646912, Length=288, Percent_Identity=29.8611111111111, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24646910, Length=288, Percent_Identity=29.8611111111111, Blast_Score=110, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR013658
- InterPro:   IPR005511 [H]

Pfam domain/function: PF08450 SGL [H]

EC number: NA

Molecular weight: Translated: 32644; Mature: 32513

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAADRPGQITDPVAFHGEGPVWSPDWGGLRCVDLLAGDVLAVDTTSGAVRRDHVGAVAAA
CCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCHHHHHHHHHH
LRPRAAGGTVLALERGFALIDPADPDGPTDPAGSDGQAGPEDSAGSEDPAGLTAGVRRYL
HCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
GDLWDADAGVRMNDGGCDPDGRFYCGSMAYAETAGAGSLYRLAPDGTVSVVLTGVTVSNG
HHHHCCCCCCEECCCCCCCCCCEEECCEEEHHCCCCCCEEEECCCCEEEEEEEEEEECCC
LAWSPDGARAYYVDSPTSRVDVFDYDSERGLSNRRTLLTVSADGGAPDGLTVDADGYLWV
EEECCCCCEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEECCCCEEEE
ALWGGGAVRRYSPAGRLDGIVPLPVPRVTACTFGGDRLDTLYITTSQVGTDLTRYPAAGA
EEECCCCEEECCCCCCCCCEECCCCCCEEEEECCCCCEEEEEEECHHHCCCHHHCCCCCE
VFALAPGVRGQPVQPFTG
EEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
AADRPGQITDPVAFHGEGPVWSPDWGGLRCVDLLAGDVLAVDTTSGAVRRDHVGAVAAA
CCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCHHHHHHHHHH
LRPRAAGGTVLALERGFALIDPADPDGPTDPAGSDGQAGPEDSAGSEDPAGLTAGVRRYL
HCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
GDLWDADAGVRMNDGGCDPDGRFYCGSMAYAETAGAGSLYRLAPDGTVSVVLTGVTVSNG
HHHHCCCCCCEECCCCCCCCCCEEECCEEEHHCCCCCCEEEECCCCEEEEEEEEEEECCC
LAWSPDGARAYYVDSPTSRVDVFDYDSERGLSNRRTLLTVSADGGAPDGLTVDADGYLWV
EEECCCCCEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEECCCCEEEE
ALWGGGAVRRYSPAGRLDGIVPLPVPRVTACTFGGDRLDTLYITTSQVGTDLTRYPAAGA
EEECCCCEEECCCCCCCCCEECCCCCCEEEEECCCCCEEEEEEECHHHCCCHHHCCCCCE
VFALAPGVRGQPVQPFTG
EEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA