| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158316424
Identifier: 158316424
GI number: 158316424
Start: 5558568
End: 5559029
Strand: Reverse
Name: 158316424
Synonym: Franean1_4658
Alternate gene names: NA
Gene position: 5559029-5558568 (Counterclockwise)
Preceding gene: 158316429
Following gene: 158316421
Centisome position: 61.89
GC content: 69.26
Gene sequence:
>462_bases ATGATCCTGGCCATGGCGGTTCGGCTGATCTACCTCGTCTTCTGTCGACTGGTCGGCTGGCTGGGGCTGGTGGCCCGCGG TTCGGTGGCGAAAGACGCCGAGATCCTCGTGCTCCGCCACGAACTCGCCGTGCTACGCCGCCAGGTGCCCCGACCCCGGT TCTGCTGGGCGGACCGCGCCATCCTGGCCGGGCTGGCCCGGCTGCTCCCGCGGGCGTCCCGGCCGATCCTGCTGGTCCGC CCGGAAACGATCCTGCGCTGGCACCGCCACCTGGTCCGCCGCCGCTGGACCCGGCCGCACCTGTGGGACTCTGTTGCCCA ATTCGGCTACGCGGCGAGGCTGAAGTCGAGTCTTGCGAGGTGGCTGGCCCGAGGCCGGTCGAGTGGTCAACGAATACGAA CGAGCCGCCTAAAAGACCAGGTAAACGCCGGTGGCCGAGTTCTGGCACCCCACAGGTCGTAG
Upstream 100 bases:
>100_bases TTCTGTCTCACCCGATGATCGATAGGCCTTCCCCGGAGGCGATCGGACACCTATACCCCTACCGGCTACACGTGCTCTTG ACCGGGACATCACCGCGTGG
Downstream 100 bases:
>100_bases ACGGAAGACCTTCCGAGGCTTACGTGTCGAGGTGGTCTCGGCCGAGGGGATGTGCCGCTCGGCGCCTGGTGCTCGAACTC ATCTACACCCACGCCGAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: Aldo/Keto Reductase
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MILAMAVRLIYLVFCRLVGWLGLVARGSVAKDAEILVLRHELAVLRRQVPRPRFCWADRAILAGLARLLPRASRPILLVR PETILRWHRHLVRRRWTRPHLWDSVAQFGYAARLKSSLARWLARGRSSGQRIRTSRLKDQVNAGGRVLAPHRS
Sequences:
>Translated_153_residues MILAMAVRLIYLVFCRLVGWLGLVARGSVAKDAEILVLRHELAVLRRQVPRPRFCWADRAILAGLARLLPRASRPILLVR PETILRWHRHLVRRRWTRPHLWDSVAQFGYAARLKSSLARWLARGRSSGQRIRTSRLKDQVNAGGRVLAPHRS >Mature_153_residues MILAMAVRLIYLVFCRLVGWLGLVARGSVAKDAEILVLRHELAVLRRQVPRPRFCWADRAILAGLARLLPRASRPILLVR PETILRWHRHLVRRRWTRPHLWDSVAQFGYAARLKSSLARWLARGRSSGQRIRTSRLKDQVNAGGRVLAPHRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17646; Mature: 17646
Theoretical pI: Translated: 12.63; Mature: 12.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILAMAVRLIYLVFCRLVGWLGLVARGSVAKDAEILVLRHELAVLRRQVPRPRFCWADRA CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH ILAGLARLLPRASRPILLVRPETILRWHRHLVRRRWTRPHLWDSVAQFGYAARLKSSLAR HHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH WLARGRSSGQRIRTSRLKDQVNAGGRVLAPHRS HHHHCCCCCHHHHHHHHHHHHCCCCEEECCCCC >Mature Secondary Structure MILAMAVRLIYLVFCRLVGWLGLVARGSVAKDAEILVLRHELAVLRRQVPRPRFCWADRA CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH ILAGLARLLPRASRPILLVRPETILRWHRHLVRRRWTRPHLWDSVAQFGYAARLKSSLAR HHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH WLARGRSSGQRIRTSRLKDQVNAGGRVLAPHRS HHHHCCCCCHHHHHHHHHHHHCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA