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The map label for this gene is yurM [H]

Identifier: 158316384

GI number: 158316384

Start: 5500779

End: 5501666

Strand: Reverse

Name: yurM [H]

Synonym: Franean1_4615

Alternate gene names: 158316384

Gene position: 5501666-5500779 (Counterclockwise)

Preceding gene: 158316385

Following gene: 158316383

Centisome position: 61.25

GC content: 67.79

Gene sequence:

>888_bases
ATGACCACCGTCACCTCTGCTCCCGCAGCCGGCCCCGCCACGGCGCCTGCCCGGCGCCCGACGCGGGACCGCACCGCGCT
GCTCGGCTGGTCAGCCGCGAACCTCGTCATCGTCGGGATGTCGCTGGTGCCGTTGCTGTGGCTGGTGTCGCTGTCGTTCA
AGACCCCGGCCAGCATCACCGACGGCAGCTTCATCCCGCGCGAGTGGACCTTCGAGAACTACCGGGAGATCTTCGGTGAG
TCCCTGTTCACCCGGGCACTGCTGAACAGCCTCGGGATCGCGCTCATCTCCACCGCGCTCGCGGTGGTTCTCGGCTCGAT
GGCCGCCTACGCGATAGCCCGGCTCGCCTTCCCCGGCAAGCGGCTGCTCGTCGGCCTGGCCCTGCTGATCGCCATGTTCC
CGCAGATCTCCCTGGTCAGCCCGCTGTTCAACCTGTGGCGCCAGATCGGCATCTTCGACACCTGGCTCGGGCTGATCATC
CCGTACCTGACGTTCTCCCTGCCGCTGGCCATCTACACGTTGTCGGCGTTCTTTCGGGAGATCCCCTGGGACCTGGAGAA
GGCCGCACAGGTCGACGGAGCCACCCCGCGGCAGGCGTTCCTGCGGGTCATCGCCCCGCTGGCCGCGCCGGGCATGGTGA
CCACCGCGATCCTGGTGTTCATCTTCTGCTGGAACGACTTCCTGTTCGCCATCTCGCTGACGTCGACGGAGCAGTCGCGG
ACCGTCCCGGCCGCCATCGCGTTCTTCACCGGCGCGTCGCAGTTCGCCCAGCCGATCGGGTCGATCGCGGCGGCGGCCGT
CGTCATCACCATCCCGATCATCATCTTCGTGCTGCTGTTCCAACGTCGGATCGTCGCCGGGCTGACCTCCGGCGCGGTGA
AGGGATAG

Upstream 100 bases:

>100_bases
CCTCGTTGTCGGTTCTCATCTTCCTCGTCGTGGCGCTCGTGGCGTTCGTTTTCGTCAAGGGGTTCGGCGCCGCCGCGCCC
GGTGGGGAGGGCCACCGCTG

Downstream 100 bases:

>100_bases
GCCCGCCCATGGCCGACATCGTGCTCGACCACGTCACCAAGCGGTTCCCGGACGGCCGGCTCGCGGTGGACGACGCCAGC
CTCTCCATCGCGGACGGCGA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MTTVTSAPAAGPATAPARRPTRDRTALLGWSAANLVIVGMSLVPLLWLVSLSFKTPASITDGSFIPREWTFENYREIFGE
SLFTRALLNSLGIALISTALAVVLGSMAAYAIARLAFPGKRLLVGLALLIAMFPQISLVSPLFNLWRQIGIFDTWLGLII
PYLTFSLPLAIYTLSAFFREIPWDLEKAAQVDGATPRQAFLRVIAPLAAPGMVTTAILVFIFCWNDFLFAISLTSTEQSR
TVPAAIAFFTGASQFAQPIGSIAAAAVVITIPIIIFVLLFQRRIVAGLTSGAVKG

Sequences:

>Translated_295_residues
MTTVTSAPAAGPATAPARRPTRDRTALLGWSAANLVIVGMSLVPLLWLVSLSFKTPASITDGSFIPREWTFENYREIFGE
SLFTRALLNSLGIALISTALAVVLGSMAAYAIARLAFPGKRLLVGLALLIAMFPQISLVSPLFNLWRQIGIFDTWLGLII
PYLTFSLPLAIYTLSAFFREIPWDLEKAAQVDGATPRQAFLRVIAPLAAPGMVTTAILVFIFCWNDFLFAISLTSTEQSR
TVPAAIAFFTGASQFAQPIGSIAAAAVVITIPIIIFVLLFQRRIVAGLTSGAVKG
>Mature_294_residues
TTVTSAPAAGPATAPARRPTRDRTALLGWSAANLVIVGMSLVPLLWLVSLSFKTPASITDGSFIPREWTFENYREIFGES
LFTRALLNSLGIALISTALAVVLGSMAAYAIARLAFPGKRLLVGLALLIAMFPQISLVSPLFNLWRQIGIFDTWLGLIIP
YLTFSLPLAIYTLSAFFREIPWDLEKAAQVDGATPRQAFLRVIAPLAAPGMVTTAILVFIFCWNDFLFAISLTSTEQSRT
VPAAIAFFTGASQFAQPIGSIAAAAVVITIPIIIFVLLFQRRIVAGLTSGAVKG

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=283, Percent_Identity=33.5689045936396, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI1790464, Length=277, Percent_Identity=33.5740072202166, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1789860, Length=235, Percent_Identity=25.1063829787234, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31721; Mature: 31590

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTVTSAPAAGPATAPARRPTRDRTALLGWSAANLVIVGMSLVPLLWLVSLSFKTPASIT
CCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DGSFIPREWTFENYREIFGESLFTRALLNSLGIALISTALAVVLGSMAAYAIARLAFPGK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
RLLVGLALLIAMFPQISLVSPLFNLWRQIGIFDTWLGLIIPYLTFSLPLAIYTLSAFFRE
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPWDLEKAAQVDGATPRQAFLRVIAPLAAPGMVTTAILVFIFCWNDFLFAISLTSTEQSR
CCCCHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCHH
TVPAAIAFFTGASQFAQPIGSIAAAAVVITIPIIIFVLLFQRRIVAGLTSGAVKG
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TTVTSAPAAGPATAPARRPTRDRTALLGWSAANLVIVGMSLVPLLWLVSLSFKTPASIT
CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DGSFIPREWTFENYREIFGESLFTRALLNSLGIALISTALAVVLGSMAAYAIARLAFPGK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
RLLVGLALLIAMFPQISLVSPLFNLWRQIGIFDTWLGLIIPYLTFSLPLAIYTLSAFFRE
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPWDLEKAAQVDGATPRQAFLRVIAPLAAPGMVTTAILVFIFCWNDFLFAISLTSTEQSR
CCCCHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCHH
TVPAAIAFFTGASQFAQPIGSIAAAAVVITIPIIIFVLLFQRRIVAGLTSGAVKG
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]