The gene/protein map for NC_009921 is currently unavailable.
Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158316350

Identifier: 158316350

GI number: 158316350

Start: 5461581

End: 5461985

Strand: Reverse

Name: 158316350

Synonym: Franean1_4579

Alternate gene names: NA

Gene position: 5461985-5461581 (Counterclockwise)

Preceding gene: 158316351

Following gene: 158316349

Centisome position: 60.81

GC content: 79.51

Gene sequence:

>405_bases
GTGAGTGCGCACCCGCGGGTGTCGGTCAGCGGGCTGTGCTTCCCGGAGCTGTCCGCGCTCGACACCCTGGAGGCCGTCGC
GGCGCTCGGGGTCACGAACGCCTCGCTGACCGGGGCGAAGGTGCGCGCCGCCGGCGCCGAGGCCGTCGCCGCGGCGAGCC
GGCGGCACGGCGTGCGCGTGGTGACCACGACGGCGGCGCTGGGCCTTGATCTGCGGCCCGGCGCCGACGCCGTCGCGGCA
CAGCTGCGCGAGGCGCGGGTGGACGTCGACAACGCCGCCGCCGTCGGGGCGGGCACGGTGTACGGGCTCACCGGCCCCCG
TCCGGGCGCGGACTGGGACGCGGGGCCGCGGCCTACGCCGACGCCGTCACCGAGCTCGTCGACCACGCCGCCGGGCGCGG
GGTGA

Upstream 100 bases:

>100_bases
ACGGCGCCACGAGCCCCCCCGAGCCCTCGCCGCTCGAGCCCTCGCCGCTCGAGTCGTCGGCGGTCGCATCGTCGGCGGTC
GCATCGTCGGCGGCACAGCG

Downstream 100 bases:

>100_bases
CCCTCGCGGTCGAGCCGGCGAACTGGCTCTACGCCGACCTCACCTTCGTCCACTCGTTCCACGACGCGCTGCGGCTCGCC
CGCCGGGCCGGGCTGGGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MSAHPRVSVSGLCFPELSALDTLEAVAALGVTNASLTGAKVRAAGAEAVAAASRRHGVRVVTTTAALGLDLRPGADAVAA
QLREARVDVDNAAAVGAGTVYGLTGPRPGADWDAGPRPTPTPSPSSSTTPPGAG

Sequences:

>Translated_134_residues
MSAHPRVSVSGLCFPELSALDTLEAVAALGVTNASLTGAKVRAAGAEAVAAASRRHGVRVVTTTAALGLDLRPGADAVAA
QLREARVDVDNAAAVGAGTVYGLTGPRPGADWDAGPRPTPTPSPSSSTTPPGAG
>Mature_133_residues
SAHPRVSVSGLCFPELSALDTLEAVAALGVTNASLTGAKVRAAGAEAVAAASRRHGVRVVTTTAALGLDLRPGADAVAAQ
LREARVDVDNAAAVGAGTVYGLTGPRPGADWDAGPRPTPTPSPSSSTTPPGAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13120; Mature: 12989

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAHPRVSVSGLCFPELSALDTLEAVAALGVTNASLTGAKVRAAGAEAVAAASRRHGVRV
CCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHCCEEE
VTTTAALGLDLRPGADAVAAQLREARVDVDNAAAVGAGTVYGLTGPRPGADWDAGPRPTP
EEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC
TPSPSSSTTPPGAG
CCCCCCCCCCCCCC
>Mature Secondary Structure 
SAHPRVSVSGLCFPELSALDTLEAVAALGVTNASLTGAKVRAAGAEAVAAASRRHGVRV
CCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHCCEEE
VTTTAALGLDLRPGADAVAAQLREARVDVDNAAAVGAGTVYGLTGPRPGADWDAGPRPTP
EEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC
TPSPSSSTTPPGAG
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA