Click here to switch to the map view.

The map label for this gene is mmgC [H]

Identifier: 158316306

GI number: 158316306

Start: 5408998

End: 5410194

Strand: Reverse

Name: mmgC [H]

Synonym: Franean1_4533

Alternate gene names: 158316306

Gene position: 5410194-5408998 (Counterclockwise)

Preceding gene: 158316307

Following gene: 158316304

Centisome position: 60.23

GC content: 63.74

Gene sequence:

>1197_bases
ATGGGCAGGATCGCGCAGACCGATGGGCTGACCGAGGTGCAGTCCGACATCCTCGCGGCGGTGCGGTCGTTCGTGGACAA
GGAGATCCTGCCGAACGCGGGCGATCTTGAGCGTAAGGACGAGTATCCCGAGGCGATCGTCGAGGCGATGAAGGAGATGG
GCCTGTTCGGGATCACGATCCCGGAGCAGTACGGCGGTCTCGGTGAGTCGTTGTTGACGTACGCGCTGGTGGTGGAGGAG
ATCGCCCGCGGGTGGATGAGCGTGTCCGGGGTGATCAACACTCATTTCATCGTGGCGTATCTGGTGTTGCAGCACGGTAC
CGACGAGCAGCGGGAGCGGTTGTTGCCGCGGATGGCGACCGGTGCGCTGCGTGGGGCGTTCTCGATGAGTGAGCCGGGGT
GTGGTTCGGATGTGTCGGCGATCACGACCCGGGCTGGCCGTGACGGCGACGAGTACACGATCACCGGGCAGAAGATGTGG
CTGACCAACGGTGCCCGTGCGGGTCTGGTCGCGACGTTGGTGAAGACGGATGAGGGTGCGGAGTCGGTCTATCGGAACAT
GACGACGTTCCTGTTGGAGAAGGAGCCGGGGTTTGGTACCGACGGTGGTATCACGATTCCCGGGAAGCTGGAGAAGCTCG
GGTACAAGGGTGTCGAGACCACGGAGATGATCCTGGATGGTCATCGGGTGCCGGCGAGTTCGATCCTGGGTGGCCCCGGG
GGGGCGGGTCGTGGTTTCTACCAGATGATGGATGGGGTGGAGGTCGGGCGGGTCAACGTCGCGGCCCGTGCCTGCGGGAT
CATGATCCGGGCGTTCGAGTTGGCGATCGCCTACGCTCAGCAGCGGCGGACGTTCGGCCATCAGATCGCCGATCATCAGG
CGATCGCGTTCAAGCTCGCGGACATGGCGACCAAGGTCGAGGCGGGTCATCTGATGATGGTCAACGCCGCGCGTAAGAAG
GACAGCGGGCAGCGTAACGACGTCGAGGCCGGGATGGCGAAGTACCTGGCCAGTGAGTACTGCCATGAGGTGACCACCGA
GTCGTTCCGGATCCACGGCGGCTACGGGTACTCCAAGGAGTACGAGATCGAGCGTCTCTACCGGGAGGCCCCGTTCATGC
TCATCGGCGAGGGGACGTCCGAGGTGCAGAAGCGCATCATCAGCCGCGCCCTGCTCAAGGAATACAGACTTCGCTGA

Upstream 100 bases:

>100_bases
TGCCGCGGGTATGGCGCGTACCGCGGCCTTCGAGCCGCCGGCCGGCTGAACCCCGGTCTGGCTGTTTCTCCGTCGAGACC
TCAAGGACACAGGAGCCGTT

Downstream 100 bases:

>100_bases
ACGGGTGATGCGTCCGGCGGCGAGCGGGCCCACGCCGTCGGCGGGCACGGTGTCCGGCCCGCGACGACGGCGTGTGCCTC
ACCGGTCGGCCGGTGCCTCC

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MGRIAQTDGLTEVQSDILAAVRSFVDKEILPNAGDLERKDEYPEAIVEAMKEMGLFGITIPEQYGGLGESLLTYALVVEE
IARGWMSVSGVINTHFIVAYLVLQHGTDEQRERLLPRMATGALRGAFSMSEPGCGSDVSAITTRAGRDGDEYTITGQKMW
LTNGARAGLVATLVKTDEGAESVYRNMTTFLLEKEPGFGTDGGITIPGKLEKLGYKGVETTEMILDGHRVPASSILGGPG
GAGRGFYQMMDGVEVGRVNVAARACGIMIRAFELAIAYAQQRRTFGHQIADHQAIAFKLADMATKVEAGHLMMVNAARKK
DSGQRNDVEAGMAKYLASEYCHEVTTESFRIHGGYGYSKEYEIERLYREAPFMLIGEGTSEVQKRIISRALLKEYRLR

Sequences:

>Translated_398_residues
MGRIAQTDGLTEVQSDILAAVRSFVDKEILPNAGDLERKDEYPEAIVEAMKEMGLFGITIPEQYGGLGESLLTYALVVEE
IARGWMSVSGVINTHFIVAYLVLQHGTDEQRERLLPRMATGALRGAFSMSEPGCGSDVSAITTRAGRDGDEYTITGQKMW
LTNGARAGLVATLVKTDEGAESVYRNMTTFLLEKEPGFGTDGGITIPGKLEKLGYKGVETTEMILDGHRVPASSILGGPG
GAGRGFYQMMDGVEVGRVNVAARACGIMIRAFELAIAYAQQRRTFGHQIADHQAIAFKLADMATKVEAGHLMMVNAARKK
DSGQRNDVEAGMAKYLASEYCHEVTTESFRIHGGYGYSKEYEIERLYREAPFMLIGEGTSEVQKRIISRALLKEYRLR
>Mature_397_residues
GRIAQTDGLTEVQSDILAAVRSFVDKEILPNAGDLERKDEYPEAIVEAMKEMGLFGITIPEQYGGLGESLLTYALVVEEI
ARGWMSVSGVINTHFIVAYLVLQHGTDEQRERLLPRMATGALRGAFSMSEPGCGSDVSAITTRAGRDGDEYTITGQKMWL
TNGARAGLVATLVKTDEGAESVYRNMTTFLLEKEPGFGTDGGITIPGKLEKLGYKGVETTEMILDGHRVPASSILGGPGG
AGRGFYQMMDGVEVGRVNVAARACGIMIRAFELAIAYAQQRRTFGHQIADHQAIAFKLADMATKVEAGHLMMVNAARKKD
SGQRNDVEAGMAKYLASEYCHEVTTESFRIHGGYGYSKEYEIERLYREAPFMLIGEGTSEVQKRIISRALLKEYRLR

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=395, Percent_Identity=36.4556962025316, Blast_Score=241, Evalue=7e-64,
Organism=Homo sapiens, GI187960098, Length=388, Percent_Identity=35.8247422680412, Blast_Score=240, Evalue=1e-63,
Organism=Homo sapiens, GI4557231, Length=388, Percent_Identity=35.8247422680412, Blast_Score=240, Evalue=2e-63,
Organism=Homo sapiens, GI4501859, Length=396, Percent_Identity=31.8181818181818, Blast_Score=216, Evalue=2e-56,
Organism=Homo sapiens, GI226958412, Length=394, Percent_Identity=32.2335025380711, Blast_Score=216, Evalue=2e-56,
Organism=Homo sapiens, GI226958414, Length=360, Percent_Identity=33.0555555555556, Blast_Score=202, Evalue=5e-52,
Organism=Homo sapiens, GI4501857, Length=380, Percent_Identity=32.3684210526316, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI7656849, Length=387, Percent_Identity=28.9405684754522, Blast_Score=195, Evalue=7e-50,
Organism=Homo sapiens, GI21361497, Length=388, Percent_Identity=30.9278350515464, Blast_Score=184, Evalue=1e-46,
Organism=Homo sapiens, GI76496475, Length=385, Percent_Identity=31.1688311688312, Blast_Score=167, Evalue=1e-41,
Organism=Homo sapiens, GI4557235, Length=385, Percent_Identity=31.1688311688312, Blast_Score=167, Evalue=2e-41,
Organism=Homo sapiens, GI4503943, Length=381, Percent_Identity=29.3963254593176, Blast_Score=136, Evalue=4e-32,
Organism=Homo sapiens, GI7669494, Length=355, Percent_Identity=29.8591549295775, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI38505218, Length=414, Percent_Identity=24.3961352657005, Blast_Score=102, Evalue=5e-22,
Organism=Homo sapiens, GI48976061, Length=415, Percent_Identity=23.1325301204819, Blast_Score=96, Evalue=7e-20,
Organism=Homo sapiens, GI211971008, Length=416, Percent_Identity=23.0769230769231, Blast_Score=95, Evalue=9e-20,
Organism=Escherichia coli, GI87081958, Length=391, Percent_Identity=29.156010230179, Blast_Score=146, Evalue=3e-36,
Organism=Escherichia coli, GI1786223, Length=396, Percent_Identity=28.5353535353535, Blast_Score=144, Evalue=8e-36,
Organism=Escherichia coli, GI87082384, Length=297, Percent_Identity=27.6094276094276, Blast_Score=80, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17508101, Length=390, Percent_Identity=34.3589743589744, Blast_Score=234, Evalue=4e-62,
Organism=Caenorhabditis elegans, GI17570075, Length=384, Percent_Identity=33.3333333333333, Blast_Score=233, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI17569725, Length=388, Percent_Identity=33.5051546391753, Blast_Score=229, Evalue=1e-60,
Organism=Caenorhabditis elegans, GI17538396, Length=393, Percent_Identity=34.8600508905852, Blast_Score=228, Evalue=3e-60,
Organism=Caenorhabditis elegans, GI17534899, Length=387, Percent_Identity=33.0749354005168, Blast_Score=225, Evalue=3e-59,
Organism=Caenorhabditis elegans, GI17506239, Length=390, Percent_Identity=32.3076923076923, Blast_Score=223, Evalue=1e-58,
Organism=Caenorhabditis elegans, GI17533517, Length=385, Percent_Identity=30.9090909090909, Blast_Score=196, Evalue=1e-50,
Organism=Caenorhabditis elegans, GI71990804, Length=304, Percent_Identity=35.8552631578947, Blast_Score=185, Evalue=3e-47,
Organism=Caenorhabditis elegans, GI71985184, Length=388, Percent_Identity=29.639175257732, Blast_Score=167, Evalue=6e-42,
Organism=Caenorhabditis elegans, GI17505929, Length=372, Percent_Identity=31.1827956989247, Blast_Score=159, Evalue=3e-39,
Organism=Caenorhabditis elegans, GI17551932, Length=379, Percent_Identity=29.287598944591, Blast_Score=152, Evalue=4e-37,
Organism=Caenorhabditis elegans, GI32563615, Length=240, Percent_Identity=33.75, Blast_Score=149, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI71985192, Length=335, Percent_Identity=28.955223880597, Blast_Score=136, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI17534353, Length=392, Percent_Identity=26.2755102040816, Blast_Score=129, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI71982178, Length=290, Percent_Identity=25.5172413793103, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17531909, Length=258, Percent_Identity=27.906976744186, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI86563381, Length=289, Percent_Identity=28.719723183391, Blast_Score=86, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI86563383, Length=289, Percent_Identity=28.719723183391, Blast_Score=86, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17531913, Length=227, Percent_Identity=28.1938325991189, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI21356377, Length=395, Percent_Identity=35.9493670886076, Blast_Score=233, Evalue=2e-61,
Organism=Drosophila melanogaster, GI24646207, Length=392, Percent_Identity=36.734693877551, Blast_Score=230, Evalue=2e-60,
Organism=Drosophila melanogaster, GI24660351, Length=385, Percent_Identity=36.1038961038961, Blast_Score=227, Evalue=9e-60,
Organism=Drosophila melanogaster, GI21355753, Length=392, Percent_Identity=32.1428571428571, Blast_Score=208, Evalue=6e-54,
Organism=Drosophila melanogaster, GI24666513, Length=387, Percent_Identity=31.5245478036176, Blast_Score=206, Evalue=3e-53,
Organism=Drosophila melanogaster, GI281363737, Length=393, Percent_Identity=28.498727735369, Blast_Score=158, Evalue=8e-39,
Organism=Drosophila melanogaster, GI19920834, Length=385, Percent_Identity=27.012987012987, Blast_Score=124, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 43545; Mature: 43414

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRIAQTDGLTEVQSDILAAVRSFVDKEILPNAGDLERKDEYPEAIVEAMKEMGLFGITI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEC
PEQYGGLGESLLTYALVVEEIARGWMSVSGVINTHFIVAYLVLQHGTDEQRERLLPRMAT
CHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
GALRGAFSMSEPGCGSDVSAITTRAGRDGDEYTITGQKMWLTNGARAGLVATLVKTDEGA
HHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCEEEECCCCCCCCEEHHHCCCCCH
ESVYRNMTTFLLEKEPGFGTDGGITIPGKLEKLGYKGVETTEMILDGHRVPASSILGGPG
HHHHHHHHHHEEECCCCCCCCCCEECCCHHHHCCCCCCCHHHHHHCCCCCCHHHHCCCCC
GAGRGFYQMMDGVEVGRVNVAARACGIMIRAFELAIAYAQQRRTFGHQIADHQAIAFKLA
CCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
DMATKVEAGHLMMVNAARKKDSGQRNDVEAGMAKYLASEYCHEVTTESFRIHGGYGYSKE
HHHHHHCCCCEEEEECHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC
YEIERLYREAPFMLIGEGTSEVQKRIISRALLKEYRLR
HHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GRIAQTDGLTEVQSDILAAVRSFVDKEILPNAGDLERKDEYPEAIVEAMKEMGLFGITI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEC
PEQYGGLGESLLTYALVVEEIARGWMSVSGVINTHFIVAYLVLQHGTDEQRERLLPRMAT
CHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
GALRGAFSMSEPGCGSDVSAITTRAGRDGDEYTITGQKMWLTNGARAGLVATLVKTDEGA
HHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCEEEECCCCCCCCEEHHHCCCCCH
ESVYRNMTTFLLEKEPGFGTDGGITIPGKLEKLGYKGVETTEMILDGHRVPASSILGGPG
HHHHHHHHHHEEECCCCCCCCCCEECCCHHHHCCCCCCCHHHHHHCCCCCCHHHHCCCCC
GAGRGFYQMMDGVEVGRVNVAARACGIMIRAFELAIAYAQQRRTFGHQIADHQAIAFKLA
CCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
DMATKVEAGHLMMVNAARKKDSGQRNDVEAGMAKYLASEYCHEVTTESFRIHGGYGYSKE
HHHHHHCCCCEEEEECHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC
YEIERLYREAPFMLIGEGTSEVQKRIISRALLKEYRLR
HHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]