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The map label for this gene is ssuC [H]

Identifier: 158316295

GI number: 158316295

Start: 5394769

End: 5395758

Strand: Reverse

Name: ssuC [H]

Synonym: Franean1_4522

Alternate gene names: 158316295

Gene position: 5395758-5394769 (Counterclockwise)

Preceding gene: 158316296

Following gene: 158316294

Centisome position: 60.07

GC content: 67.68

Gene sequence:

>990_bases
GTGAACCCGACGCCGGTGTCGACAACAGCCGGAGTGCAGGCCGCAGTGCCGGCCGGGCCGCAGGGCGTCGGCGTGCCGGG
CGGCGGCGGCGCGCAGGGCGGTGTGCTGGGCGGCCCCGTGGCGGCCACCGTCACCGGCTCGGATGAGCAGTCGTCCACCA
CCGCGGCCCGCAAGCCGCGCCGCCCGATGGACATCAAGCGGCTGATCGTCCTCATCTCGCGGGTGGTACTCCCGGTCGGG
GTGCTGGCACTCTGGGAGACCGCGAGCGGGGACCCCGCGACCGAGTCGGGCGTGCTCATCGACAGTTTCTACGTCAGCAA
GCCGTCCGAGATCTGGTCGGCGCTGACCGGCTGGGTCGAGGAGGGTGTGCTGCTGGACAGCATCCAGGCGACCGTCATCG
CGACGGTGTACGGGTTCGCCATCGGCGCGGTGCTCGGCGTTCTGGTGGGCATCGTGCTGGGCAGCAGCCCGATGCTCGGC
GAGATCTTCCAGCCGTTCATCGTCGCGCTCAACGCGGTCCCGCGGCTGGCCCTGGTGCCGCTTTTCATCCTGTGGTTCGG
ATTCGGCCTGGGTTCCAAGGTGGCGCTGGTCAGCCTCATCGTCTTCTTTCTCGTCTTCTACAGCACCTACGAAGGTGTGC
GTGACGTCGAACAGCGCCTTATCGACGTGCTGAAGGTGATGAACGCGTCGAGGCTCACCGTGCAGCTGAAAGTTCGGATC
CCCTCGGCCGGGACCTGGATCATCCAGGGCCTGCGGGTCTCGGTGCCCTACGCGCTCGTCGCGGCGGTCACCGCCGAAAT
CATCGGCGCCAACACCGGCATCGGTTATCTGATCCAGCGGTCGGCGGGTAACTTCTACACCGCCGGCGTCTTCGCGGGCA
TCGCGGTTCTTGTGGTGGTCTCCACCATCATCAACGCGCTCGTGACGCTGCTGGAGAAGCGCCTGCTGCGGTGGAAGCCG
CGCAACCTGACCAACGTCGGAGCACCATGA

Upstream 100 bases:

>100_bases
CGCGTGACCTCGCCGACCTGCGGCTCAGCCCGGTCTACGGCGAGCTCTGGGAACGACTGTGGAAGTTGCTGGACCACTCT
TCACCCGCCAAGGAGGCATC

Downstream 100 bases:

>100_bases
GCCTGCCGGTTGGCTCCGGCCCGCTCGCAGGGACGCGCGTCCTTGAGATCGCGGGCCGGGGCCCCGGCCCCTTCGCGGGC
ATGCTCCTGGCGGACATGGG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MNPTPVSTTAGVQAAVPAGPQGVGVPGGGGAQGGVLGGPVAATVTGSDEQSSTTAARKPRRPMDIKRLIVLISRVVLPVG
VLALWETASGDPATESGVLIDSFYVSKPSEIWSALTGWVEEGVLLDSIQATVIATVYGFAIGAVLGVLVGIVLGSSPMLG
EIFQPFIVALNAVPRLALVPLFILWFGFGLGSKVALVSLIVFFLVFYSTYEGVRDVEQRLIDVLKVMNASRLTVQLKVRI
PSAGTWIIQGLRVSVPYALVAAVTAEIIGANTGIGYLIQRSAGNFYTAGVFAGIAVLVVVSTIINALVTLLEKRLLRWKP
RNLTNVGAP

Sequences:

>Translated_329_residues
MNPTPVSTTAGVQAAVPAGPQGVGVPGGGGAQGGVLGGPVAATVTGSDEQSSTTAARKPRRPMDIKRLIVLISRVVLPVG
VLALWETASGDPATESGVLIDSFYVSKPSEIWSALTGWVEEGVLLDSIQATVIATVYGFAIGAVLGVLVGIVLGSSPMLG
EIFQPFIVALNAVPRLALVPLFILWFGFGLGSKVALVSLIVFFLVFYSTYEGVRDVEQRLIDVLKVMNASRLTVQLKVRI
PSAGTWIIQGLRVSVPYALVAAVTAEIIGANTGIGYLIQRSAGNFYTAGVFAGIAVLVVVSTIINALVTLLEKRLLRWKP
RNLTNVGAP
>Mature_329_residues
MNPTPVSTTAGVQAAVPAGPQGVGVPGGGGAQGGVLGGPVAATVTGSDEQSSTTAARKPRRPMDIKRLIVLISRVVLPVG
VLALWETASGDPATESGVLIDSFYVSKPSEIWSALTGWVEEGVLLDSIQATVIATVYGFAIGAVLGVLVGIVLGSSPMLG
EIFQPFIVALNAVPRLALVPLFILWFGFGLGSKVALVSLIVFFLVFYSTYEGVRDVEQRLIDVLKVMNASRLTVQLKVRI
PSAGTWIIQGLRVSVPYALVAAVTAEIIGANTGIGYLIQRSAGNFYTAGVFAGIAVLVVVSTIINALVTLLEKRLLRWKP
RNLTNVGAP

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=264, Percent_Identity=29.5454545454545, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1786564, Length=256, Percent_Identity=30.078125, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34331; Mature: 34331

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPTPVSTTAGVQAAVPAGPQGVGVPGGGGAQGGVLGGPVAATVTGSDEQSSTTAARKPR
CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHCCC
RPMDIKRLIVLISRVVLPVGVLALWETASGDPATESGVLIDSFYVSKPSEIWSALTGWVE
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHCCCHHHHHHHHHHHHH
EGVLLDSIQATVIATVYGFAIGAVLGVLVGIVLGSSPMLGEIFQPFIVALNAVPRLALVP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHH
LFILWFGFGLGSKVALVSLIVFFLVFYSTYEGVRDVEQRLIDVLKVMNASRLTVQLKVRI
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEE
PSAGTWIIQGLRVSVPYALVAAVTAEIIGANTGIGYLIQRSAGNFYTAGVFAGIAVLVVV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEHHHHHHHHHHHHHH
STIINALVTLLEKRLLRWKPRNLTNVGAP
HHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MNPTPVSTTAGVQAAVPAGPQGVGVPGGGGAQGGVLGGPVAATVTGSDEQSSTTAARKPR
CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHCCC
RPMDIKRLIVLISRVVLPVGVLALWETASGDPATESGVLIDSFYVSKPSEIWSALTGWVE
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHCCCHHHHHHHHHHHHH
EGVLLDSIQATVIATVYGFAIGAVLGVLVGIVLGSSPMLGEIFQPFIVALNAVPRLALVP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHH
LFILWFGFGLGSKVALVSLIVFFLVFYSTYEGVRDVEQRLIDVLKVMNASRLTVQLKVRI
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEE
PSAGTWIIQGLRVSVPYALVAAVTAEIIGANTGIGYLIQRSAGNFYTAGVFAGIAVLVVV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEHHHHHHHHHHHHHH
STIINALVTLLEKRLLRWKPRNLTNVGAP
HHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8011666; 9782504; 9384377 [H]