| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316289
Identifier: 158316289
GI number: 158316289
Start: 5388553
End: 5389593
Strand: Reverse
Name: 158316289
Synonym: Franean1_4516
Alternate gene names: NA
Gene position: 5389593-5388553 (Counterclockwise)
Preceding gene: 158316290
Following gene: 158316288
Centisome position: 60.0
GC content: 73.29
Gene sequence:
>1041_bases GTGGGTGAGTCGCGTGCCGCCGCGGAAGCGCCGACCCGACGGATCGAGGGCTTCGCGGTGGCGGGCGGGGTGTGGGCGAC GGCGGTCCCGTTCCCGAGTCCGCTCGCCTACTCGTACTCCTACGCGGTGCGGGCGGCCGAGGGGATCGTCGTGGTGGATC TCGGGTGGGACTCGGACGAGGCGTGGAGCGCCTTCCGATCCGGGCTGGCCCGGGCCGGTCACAGCCTCGACGAGGTGATC GGGGCTGTCGTCACCCACGCGCATCCGGATCATTACGGGCTCGCCCGCCGCATCCGGGAGCACACCACGGCCTGGATCGC CGCGCACCCTGCCGAACGGGCACAGATCCGCGTGGGCGCCGCGGAACGGCGGGCCCGTGTCGTGGAGATCGCCGACTGGC TGGGCGCGAGCGGGGTGCCTGCGACGCGGCTGGCGGGCCTCGAGTCGGAGCTCGCCGAGCTCGAGGCGGCGCTGCCCGGA ATCGAGGCGGACGTCGAGCTCCTCGACGGCGCGGCGGTGCCGGGCACCGGGGGTGCCCTCGTCGCGATCCACACACCTGG GCACACCACCGGCCATCTGTGCTTCCACGACCGTGAACGAGGCCTGGTTTTCACCGGTGACCACGTTCTGCCCAAGGTGA CCCCGAACGTGGCACTGCGTCCCGGGTCGGCCGCCGACCCGCTGCTGGCCTTCCTCGACTCGTTGCGGTACCTCCGGGAC CTTCCCGACAACCTGCTGGCCCTGCCCGGGCACGAGTGGTCGTTCGACCGTCTCTACGACCGGCTCGGCGTGCTGGAGGT GCATCACCAGTCGCGGCTGCGCGAGATCGAGCAGGCGGTGCGCGAGGGGCGGGAGACCGTCTGGGATGTGTCCCGTGCGG TGCGGTGGGCGCGGCCGTTCGACTCGTTCACCCCGCGGTCGCTGCGCTCAGCGCTCGCCGAGACCTACGCCCACCTCGCC CGGCTGTCGGAGGACGGGCGCCTGGTCCGTAGGGCCGGGCGGCCCGAGCGGTGGACGGTCGCCAGAGGCCGGTGCGACTG A
Upstream 100 bases:
>100_bases ACGACATCGCCAAGCTGCGGGAGGCCGGGGTCATCTGAGGCGTTCCATGGGCCGGTGGGAGCGTCGCGACCACGGGAACC CTGCTGCGTGAGGAGGAGAT
Downstream 100 bases:
>100_bases TCGCTGCGCACGGCTCAGCGTGGACGGTGTCGCCATGGAAGACCGGAGCGACGTGGCGTAACGGCTGGACCTCGAGGTTC GCGACTGCTTTCCCCGAGGC
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Beta-Lactamase-Like; Beta Lactamase; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Superfamily Protein; Zn-Dependent Hydrolase; Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Superfamily; Zn-Dependent Hydrolase Glyoxylase; Metallo-Beta-Lactamase Domain Protein; Zinc Metallohydrolase; Beta-Lactamase Class B; Zinc Metallohydrolase Glyoxalase II Family; Hydrolase Protein; Metallo-Beta-Lactamase Family Protein / Hydrolase; Hydrolase; AMP-Dependent Synthetase And Ligase; Metal Dependent Hydrolase; Zn-Dependent Hydrolase Including Glyoxylase-Like Protein
Number of amino acids: Translated: 346; Mature: 345
Protein sequence:
>346_residues MGESRAAAEAPTRRIEGFAVAGGVWATAVPFPSPLAYSYSYAVRAAEGIVVVDLGWDSDEAWSAFRSGLARAGHSLDEVI GAVVTHAHPDHYGLARRIREHTTAWIAAHPAERAQIRVGAAERRARVVEIADWLGASGVPATRLAGLESELAELEAALPG IEADVELLDGAAVPGTGGALVAIHTPGHTTGHLCFHDRERGLVFTGDHVLPKVTPNVALRPGSAADPLLAFLDSLRYLRD LPDNLLALPGHEWSFDRLYDRLGVLEVHHQSRLREIEQAVREGRETVWDVSRAVRWARPFDSFTPRSLRSALAETYAHLA RLSEDGRLVRRAGRPERWTVARGRCD
Sequences:
>Translated_346_residues MGESRAAAEAPTRRIEGFAVAGGVWATAVPFPSPLAYSYSYAVRAAEGIVVVDLGWDSDEAWSAFRSGLARAGHSLDEVI GAVVTHAHPDHYGLARRIREHTTAWIAAHPAERAQIRVGAAERRARVVEIADWLGASGVPATRLAGLESELAELEAALPG IEADVELLDGAAVPGTGGALVAIHTPGHTTGHLCFHDRERGLVFTGDHVLPKVTPNVALRPGSAADPLLAFLDSLRYLRD LPDNLLALPGHEWSFDRLYDRLGVLEVHHQSRLREIEQAVREGRETVWDVSRAVRWARPFDSFTPRSLRSALAETYAHLA RLSEDGRLVRRAGRPERWTVARGRCD >Mature_345_residues GESRAAAEAPTRRIEGFAVAGGVWATAVPFPSPLAYSYSYAVRAAEGIVVVDLGWDSDEAWSAFRSGLARAGHSLDEVIG AVVTHAHPDHYGLARRIREHTTAWIAAHPAERAQIRVGAAERRARVVEIADWLGASGVPATRLAGLESELAELEAALPGI EADVELLDGAAVPGTGGALVAIHTPGHTTGHLCFHDRERGLVFTGDHVLPKVTPNVALRPGSAADPLLAFLDSLRYLRDL PDNLLALPGHEWSFDRLYDRLGVLEVHHQSRLREIEQAVREGRETVWDVSRAVRWARPFDSFTPRSLRSALAETYAHLAR LSEDGRLVRRAGRPERWTVARGRCD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37723; Mature: 37592
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGESRAAAEAPTRRIEGFAVAGGVWATAVPFPSPLAYSYSYAVRAAEGIVVVDLGWDSDE CCCCCCHHHCCHHHHCCEEEECCHHEECCCCCCCCHHHHHHHHHHCCCEEEEEECCCCHH AWSAFRSGLARAGHSLDEVIGAVVTHAHPDHYGLARRIREHTTAWIAAHPAERAQIRVGA HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEECCCCCCEEEECH AERRARVVEIADWLGASGVPATRLAGLESELAELEAALPGIEADVELLDGAAVPGTGGAL HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCEE VAIHTPGHTTGHLCFHDRERGLVFTGDHVLPKVTPNVALRPGSAADPLLAFLDSLRYLRD EEEECCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHH LPDNLLALPGHEWSFDRLYDRLGVLEVHHQSRLREIEQAVREGRETVWDVSRAVRWARPF CCHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DSFTPRSLRSALAETYAHLARLSEDGRLVRRAGRPERWTVARGRCD CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEECCCCCCC >Mature Secondary Structure GESRAAAEAPTRRIEGFAVAGGVWATAVPFPSPLAYSYSYAVRAAEGIVVVDLGWDSDE CCCCCHHHCCHHHHCCEEEECCHHEECCCCCCCCHHHHHHHHHHCCCEEEEEECCCCHH AWSAFRSGLARAGHSLDEVIGAVVTHAHPDHYGLARRIREHTTAWIAAHPAERAQIRVGA HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEECCCCCCEEEECH AERRARVVEIADWLGASGVPATRLAGLESELAELEAALPGIEADVELLDGAAVPGTGGAL HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCEE VAIHTPGHTTGHLCFHDRERGLVFTGDHVLPKVTPNVALRPGSAADPLLAFLDSLRYLRD EEEECCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHH LPDNLLALPGHEWSFDRLYDRLGVLEVHHQSRLREIEQAVREGRETVWDVSRAVRWARPF CCHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DSFTPRSLRSALAETYAHLARLSEDGRLVRRAGRPERWTVARGRCD CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA