Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158316214

Identifier: 158316214

GI number: 158316214

Start: 5303802

End: 5304422

Strand: Reverse

Name: 158316214

Synonym: Franean1_4437

Alternate gene names: NA

Gene position: 5304422-5303802 (Counterclockwise)

Preceding gene: 158316215

Following gene: 158316211

Centisome position: 59.06

GC content: 66.67

Gene sequence:

>621_bases
ATGGCCGGCGGTAAAACCACCGCGGCGGCCCGGGGTGCCTGGGTCTGTTTCCTCGACGAGACAGGGCAGGGCCTGAGGCC
GCCACGTGGACGGACGTGGGCGCGCCGCGGGGTGACCCCGGTGGTGCGGGTGCCGGGGCGGGGTGGGGCCGGGCGGGTGA
GTGTGGTCGGGATGGTCTGCTACAAACCCGGGCAGCGGGCCCGGCTGGTCTACCGGGTCCGGGTCAGTCACGGCCGTTCG
GGTGAGCGCAAGGGGCTGTGCTGGGCGGATTGTCGGGATCTTCTGCTGGCCGCGCACGTGCAGCTTCCCGGGGGTCGGCT
GGTGGTGGTGTGGGACCGGTTGAACATCCACCTCCAGGCGCAGATGGCCGCGTTTCTGGCCGCGCACACCGGCTGGATCA
GTGTTGTGTGGCTGCCGGCCTATGCGCCCGATCTGAATCCCACGGAGGGTGCCTGGTCGTATCTGAAACGCACAACCCTG
GTGCATCTGGCTGCCCGTGGTATCGACGAGGTATTTCAGGCGTTCAAGCATGGACTGAAATGTATGCAGTACCGGCCCGA
GCTTCTCGTCGGGTTCCTTGCCGAAACCGGACTGGCCTGGGAAAATCTCCGATCAAAATAA

Upstream 100 bases:

>100_bases
TGTGGATGCTGCTGGACCGCAACGGCTGGTCGTGCCAGCTGCCGGTGCGGCGCGCGGTCGAACGTGATGACACTGTGGTC
GAGGAGTGGAAGGACCGGGG

Downstream 100 bases:

>100_bases
CCTCGCACATTAATCATCAGTAGCTGGCGAGGACCGCGGTCAGGTGCCGTTCGGAGACGATCAGGAGTCTGTCGGTGCAT
TCGCGGTGGGCGGTGCCGAT

Product: IS630 family transposase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MAGGKTTAAARGAWVCFLDETGQGLRPPRGRTWARRGVTPVVRVPGRGGAGRVSVVGMVCYKPGQRARLVYRVRVSHGRS
GERKGLCWADCRDLLLAAHVQLPGGRLVVVWDRLNIHLQAQMAAFLAAHTGWISVVWLPAYAPDLNPTEGAWSYLKRTTL
VHLAARGIDEVFQAFKHGLKCMQYRPELLVGFLAETGLAWENLRSK

Sequences:

>Translated_206_residues
MAGGKTTAAARGAWVCFLDETGQGLRPPRGRTWARRGVTPVVRVPGRGGAGRVSVVGMVCYKPGQRARLVYRVRVSHGRS
GERKGLCWADCRDLLLAAHVQLPGGRLVVVWDRLNIHLQAQMAAFLAAHTGWISVVWLPAYAPDLNPTEGAWSYLKRTTL
VHLAARGIDEVFQAFKHGLKCMQYRPELLVGFLAETGLAWENLRSK
>Mature_205_residues
AGGKTTAAARGAWVCFLDETGQGLRPPRGRTWARRGVTPVVRVPGRGGAGRVSVVGMVCYKPGQRARLVYRVRVSHGRSG
ERKGLCWADCRDLLLAAHVQLPGGRLVVVWDRLNIHLQAQMAAFLAAHTGWISVVWLPAYAPDLNPTEGAWSYLKRTTLV
HLAARGIDEVFQAFKHGLKCMQYRPELLVGFLAETGLAWENLRSK

Specific function: Unknown

COG id: COG3335

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22694; Mature: 22563

Theoretical pI: Translated: 11.09; Mature: 11.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGGKTTAAARGAWVCFLDETGQGLRPPRGRTWARRGVTPVVRVPGRGGAGRVSVVGMVC
CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHCCCCEEEEECCCCCCCCEEEEEEEE
YKPGQRARLVYRVRVSHGRSGERKGLCWADCRDLLLAAHVQLPGGRLVVVWDRLNIHLQA
ECCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHEECCCCEEEEEEECCCEEEHH
QMAAFLAAHTGWISVVWLPAYAPDLNPTEGAWSYLKRTTLVHLAARGIDEVFQAFKHGLK
HHHHHHHHHCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
CMQYRPELLVGFLAETGLAWENLRSK
HHHHCHHHHHHHHHHCCCCHHHHCCC
>Mature Secondary Structure 
AGGKTTAAARGAWVCFLDETGQGLRPPRGRTWARRGVTPVVRVPGRGGAGRVSVVGMVC
CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHCCCCEEEEECCCCCCCCEEEEEEEE
YKPGQRARLVYRVRVSHGRSGERKGLCWADCRDLLLAAHVQLPGGRLVVVWDRLNIHLQA
ECCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHEECCCCEEEEEEECCCEEEHH
QMAAFLAAHTGWISVVWLPAYAPDLNPTEGAWSYLKRTTLVHLAARGIDEVFQAFKHGLK
HHHHHHHHHCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
CMQYRPELLVGFLAETGLAWENLRSK
HHHHCHHHHHHHHHHCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA