| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316193
Identifier: 158316193
GI number: 158316193
Start: 5273825
End: 5274727
Strand: Reverse
Name: 158316193
Synonym: Franean1_4416
Alternate gene names: NA
Gene position: 5274727-5273825 (Counterclockwise)
Preceding gene: 158316194
Following gene: 158316190
Centisome position: 58.73
GC content: 71.65
Gene sequence:
>903_bases TTGTGCTGCCCTCGGCGGCTGACGGCCGGCTGGTGCTGGCGGTCGACGTCAGCGGAGTGGCTGCGCTCGGACGCGCCGAC CAGCGCGCAGCGGCTGTTCTGCCACGTGCACGGGCGGGCGAAGAATCAGTCCCAGCTGATCCCTGGCTGGCCGTACTCGT TCGTCGCCGCCCTCGAGTCCGGCCGGACGTCGTGGACCGCGGTCCTGGACGCGGTGCGCCTCGGCCCCACCGACGACGCC ACAGCGGTGACCGCCGACCAGCTCCGCGGGGTCGTGGGCCGTCTGACCGCAGCCGGACACTGGCACGACGGCGACCCGAA CATCCTCATCGTCATGGACGCCGGCTACGACGTCACCCGGCTGGCGTTCGTCCTGGCCGACCTGCCCGTCGAGGTGCTCG GCCGGATCCGTTCCGACCGTGTCCTGCGGCTCCCCAAACCACCCAGACTCCCCGGCGCCAACGGTCGTCCACCCAAGCAC GGCCCCGAGTCCGCCCTCGACAAGCCCGCGACCTGGCCCGAACCGCAGCACACCACGATCACCGACACCACCCGCTATGG CACCGCCACCGCGACCAGCTGGGACCGGCTGCACCCCCGGCTGACCCACCGCACCTGCTGGATCGACCACCACGGCGACC TGCCGATCATCGAAGGAACACTGATCCGGCTGCAGGTCGATCACCTGCCCGGTGACCGAGACCCCAAACCCGTCTGGCTG TGGACCTCCGCCACCAACGCCACCGCCGCCGACATCGACCGCGCCTGGCAGTCATTCCTCCGCCGGTTCGACCTGGAGAG GAGCAAGCTAGACTGCGCACATAGACGCCGCGCGGCGATCCGCCGGCGGTCGAGGAGGTCGTCGCCCTCGCTCGCCCCTG CGAGCGCCGCAGCGCGGCGGTGA
Upstream 100 bases:
>100_bases ACGCTGGCGCCGGAGCATCGCCGTGGCTACGGGGCCTTGTACGACGGGTTGAACTGTGGCCGGTTAGAGGTCGCCCGGCT GCGGCGCACACTCGCTGGTC
Downstream 100 bases:
>100_bases GATCGTCGTAACGCCGCGTGTCCGGAGCGGTCGGACCCCCATTGCGCAGCGCCTCGTCGATCGCTTCCTGCAGGGGCCGA TCGGCCGGCAGCACCCGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MCCPRRLTAGWCWRSTSAEWLRSDAPTSAQRLFCHVHGRAKNQSQLIPGWPYSFVAALESGRTSWTAVLDAVRLGPTDDA TAVTADQLRGVVGRLTAAGHWHDGDPNILIVMDAGYDVTRLAFVLADLPVEVLGRIRSDRVLRLPKPPRLPGANGRPPKH GPESALDKPATWPEPQHTTITDTTRYGTATATSWDRLHPRLTHRTCWIDHHGDLPIIEGTLIRLQVDHLPGDRDPKPVWL WTSATNATAADIDRAWQSFLRRFDLERSKLDCAHRRRAAIRRRSRRSSPSLAPASAAARR
Sequences:
>Translated_300_residues MCCPRRLTAGWCWRSTSAEWLRSDAPTSAQRLFCHVHGRAKNQSQLIPGWPYSFVAALESGRTSWTAVLDAVRLGPTDDA TAVTADQLRGVVGRLTAAGHWHDGDPNILIVMDAGYDVTRLAFVLADLPVEVLGRIRSDRVLRLPKPPRLPGANGRPPKH GPESALDKPATWPEPQHTTITDTTRYGTATATSWDRLHPRLTHRTCWIDHHGDLPIIEGTLIRLQVDHLPGDRDPKPVWL WTSATNATAADIDRAWQSFLRRFDLERSKLDCAHRRRAAIRRRSRRSSPSLAPASAAARR >Mature_300_residues MCCPRRLTAGWCWRSTSAEWLRSDAPTSAQRLFCHVHGRAKNQSQLIPGWPYSFVAALESGRTSWTAVLDAVRLGPTDDA TAVTADQLRGVVGRLTAAGHWHDGDPNILIVMDAGYDVTRLAFVLADLPVEVLGRIRSDRVLRLPKPPRLPGANGRPPKH GPESALDKPATWPEPQHTTITDTTRYGTATATSWDRLHPRLTHRTCWIDHHGDLPIIEGTLIRLQVDHLPGDRDPKPVWL WTSATNATAADIDRAWQSFLRRFDLERSKLDCAHRRRAAIRRRSRRSSPSLAPASAAARR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33498; Mature: 33498
Theoretical pI: Translated: 10.77; Mature: 10.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCCPRRLTAGWCWRSTSAEWLRSDAPTSAQRLFCHVHGRAKNQSQLIPGWPYSFVAALES CCCCCCCCCCEEECCCCHHHHHCCCCCHHHEEEEEECCCCCCCCCCCCCCCHHHHHHHHC GRTSWTAVLDAVRLGPTDDATAVTADQLRGVVGRLTAAGHWHDGDPNILIVMDAGYDVTR CCCHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHH LAFVLADLPVEVLGRIRSDRVLRLPKPPRLPGANGRPPKHGPESALDKPATWPEPQHTTI HHHHHHHCCHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEE TDTTRYGTATATSWDRLHPRLTHRTCWIDHHGDLPIIEGTLIRLQVDHLPGDRDPKPVWL CCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCEECCEEEEEEEECCCCCCCCCCEEE WTSATNATAADIDRAWQSFLRRFDLERSKLDCAHRRRAAIRRRSRRSSPSLAPASAAARR EECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCC >Mature Secondary Structure MCCPRRLTAGWCWRSTSAEWLRSDAPTSAQRLFCHVHGRAKNQSQLIPGWPYSFVAALES CCCCCCCCCCEEECCCCHHHHHCCCCCHHHEEEEEECCCCCCCCCCCCCCCHHHHHHHHC GRTSWTAVLDAVRLGPTDDATAVTADQLRGVVGRLTAAGHWHDGDPNILIVMDAGYDVTR CCCHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHH LAFVLADLPVEVLGRIRSDRVLRLPKPPRLPGANGRPPKHGPESALDKPATWPEPQHTTI HHHHHHHCCHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEE TDTTRYGTATATSWDRLHPRLTHRTCWIDHHGDLPIIEGTLIRLQVDHLPGDRDPKPVWL CCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCEECCEEEEEEEECCCCCCCCCCEEE WTSATNATAADIDRAWQSFLRRFDLERSKLDCAHRRRAAIRRRSRRSSPSLAPASAAARR EECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA