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The map label for this gene is kdpE [H]

Identifier: 158316111

GI number: 158316111

Start: 5171620

End: 5172330

Strand: Reverse

Name: kdpE [H]

Synonym: Franean1_4329

Alternate gene names: 158316111

Gene position: 5172330-5171620 (Counterclockwise)

Preceding gene: 158316113

Following gene: 158316110

Centisome position: 57.59

GC content: 74.54

Gene sequence:

>711_bases
ATGAGCGAGGAATCCGCGCCACGGGCCGGGGGCCGGGTGCTGTTCGTCGACGACGAGCCGCAGCTGCTGCGCGCGATGCG
GATCACCCTGCGCGCCCGCGGCTACGAGGTCCGCACCGCGGTCGACGGCGGGCACGCGCTGACGGAGGCCGCCGCCCACC
CGCCCGACATCGTGCTGCTCGACCTGGGCCTGCCGGACATGGACGGCATCGAGGTCATCCACGGCCTGCGCGGGTGGACC
GGCGTCCCGATCATTGTCCTGTCCGGGCGGACGGCCGGGCAGGAGAAGATCGCTTCGCTGGACGCCGGGGCCGACGACTA
CATCACCAAGCCGTTCTCCGTCGAGGAACTGCTGGCCCGGATGCGCGCCGTCGCCCGCCGGGCCCCGGCCGCCGAGACCG
GGCCCGCCGCGGACGTCGGCGACTACCGCGTGGACTTCGCGGCGAAGGCGGTGACAGCCCAGGCCGAGGGCGGGGCGGCC
GTCCACCTGACCCCCACGGAGTGGCGGCTGCTGGAGGCGCTCGTCCGCAACCCGGGCAAGCTCGTCAGCAGCCGCGCGCT
GGTCAGCCAGGTCTGGGGGCCGGCCTACGCCGCCGACACGTCGTCGCTGCGCCTCTACATCAACCGGCTGCGCCGCAAGC
TCGAGCCGGACCCCACCCGCCCGCGCCACCTGACCACCGAGCCGGGGATGGGCTACCGCTACCAGCCCTAA

Upstream 100 bases:

>100_bases
GGCGACCGGCAGGCCCCGCTGTCGGATGACCGACCGCGTCCCGCGCCGCGCGGCGCACTGCCATGCTTGGACGGGCATGG
CACGCGACGGGAGCGGGGGC

Downstream 100 bases:

>100_bases
CCTCGCGTTCCGTCACCGGGGCGAGGCCGTGGCCGGCACCGGCTCGCGACCGGATCCGTGGCCGGGTGTGGCCGTTCCCG
GTGCGTCCGGAGCCGGCCAG

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MSEESAPRAGGRVLFVDDEPQLLRAMRITLRARGYEVRTAVDGGHALTEAAAHPPDIVLLDLGLPDMDGIEVIHGLRGWT
GVPIIVLSGRTAGQEKIASLDAGADDYITKPFSVEELLARMRAVARRAPAAETGPAADVGDYRVDFAAKAVTAQAEGGAA
VHLTPTEWRLLEALVRNPGKLVSSRALVSQVWGPAYAADTSSLRLYINRLRRKLEPDPTRPRHLTTEPGMGYRYQP

Sequences:

>Translated_236_residues
MSEESAPRAGGRVLFVDDEPQLLRAMRITLRARGYEVRTAVDGGHALTEAAAHPPDIVLLDLGLPDMDGIEVIHGLRGWT
GVPIIVLSGRTAGQEKIASLDAGADDYITKPFSVEELLARMRAVARRAPAAETGPAADVGDYRVDFAAKAVTAQAEGGAA
VHLTPTEWRLLEALVRNPGKLVSSRALVSQVWGPAYAADTSSLRLYINRLRRKLEPDPTRPRHLTTEPGMGYRYQP
>Mature_235_residues
SEESAPRAGGRVLFVDDEPQLLRAMRITLRARGYEVRTAVDGGHALTEAAAHPPDIVLLDLGLPDMDGIEVIHGLRGWTG
VPIIVLSGRTAGQEKIASLDAGADDYITKPFSVEELLARMRAVARRAPAAETGPAADVGDYRVDFAAKAVTAQAEGGAAV
HLTPTEWRLLEALVRNPGKLVSSRALVSQVWGPAYAADTSSLRLYINRLRRKLEPDPTRPRHLTTEPGMGYRYQP

Specific function: Member of the two-component regulatory system kdpD/kdpE involved in the regulation of the kdp operon [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786911, Length=223, Percent_Identity=48.4304932735426, Blast_Score=207, Evalue=5e-55,
Organism=Escherichia coli, GI1787375, Length=232, Percent_Identity=35.3448275862069, Blast_Score=137, Evalue=8e-34,
Organism=Escherichia coli, GI1786784, Length=225, Percent_Identity=32, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1789809, Length=236, Percent_Identity=33.8983050847458, Blast_Score=120, Evalue=8e-29,
Organism=Escherichia coli, GI1788394, Length=243, Percent_Identity=30.0411522633745, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1786599, Length=226, Percent_Identity=31.858407079646, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI87082012, Length=223, Percent_Identity=30.4932735426009, Blast_Score=117, Evalue=8e-28,
Organism=Escherichia coli, GI1790860, Length=222, Percent_Identity=30.1801801801802, Blast_Score=104, Evalue=6e-24,
Organism=Escherichia coli, GI1790552, Length=223, Percent_Identity=32.2869955156951, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1790863, Length=229, Percent_Identity=27.5109170305677, Blast_Score=100, Evalue=8e-23,
Organism=Escherichia coli, GI1789402, Length=225, Percent_Identity=29.7777777777778, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1787229, Length=226, Percent_Identity=30.0884955752212, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI2367329, Length=211, Percent_Identity=31.2796208530806, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1788550, Length=110, Percent_Identity=35.4545454545455, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI145693140, Length=236, Percent_Identity=26.271186440678, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI145693157, Length=118, Percent_Identity=32.2033898305085, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1789149, Length=108, Percent_Identity=34.2592592592593, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25536; Mature: 25405

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEESAPRAGGRVLFVDDEPQLLRAMRITLRARGYEVRTAVDGGHALTEAAAHPPDIVLL
CCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHCCCCCCEEEE
DLGLPDMDGIEVIHGLRGWTGVPIIVLSGRTAGQEKIASLDAGADDYITKPFSVEELLAR
ECCCCCCCHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHCCCCCHHHCCCCCCHHHHHHH
MRAVARRAPAAETGPAADVGDYRVDFAAKAVTAQAEGGAAVHLTPTEWRLLEALVRNPGK
HHHHHHHCCCCCCCCCCCCCCEEHHHHHHHEEEECCCCEEEEECCHHHHHHHHHHCCCHH
LVSSRALVSQVWGPAYAADTSSLRLYINRLRRKLEPDPTRPRHLTTEPGMGYRYQP
HHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCC
>Mature Secondary Structure 
SEESAPRAGGRVLFVDDEPQLLRAMRITLRARGYEVRTAVDGGHALTEAAAHPPDIVLL
CCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHCCCCCCEEEE
DLGLPDMDGIEVIHGLRGWTGVPIIVLSGRTAGQEKIASLDAGADDYITKPFSVEELLAR
ECCCCCCCHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHCCCCCHHHCCCCCCHHHHHHH
MRAVARRAPAAETGPAADVGDYRVDFAAKAVTAQAEGGAAVHLTPTEWRLLEALVRNPGK
HHHHHHHCCCCCCCCCCCCCCEEHHHHHHHEEEECCCCEEEEECCHHHHHHHHHHCCCHH
LVSSRALVSQVWGPAYAADTSSLRLYINRLRRKLEPDPTRPRHLTTEPGMGYRYQP
HHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1532388; 8905232; 9278503 [H]