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The map label for this gene is vioD [H]

Identifier: 158316113

GI number: 158316113

Start: 5173712

End: 5175067

Strand: Reverse

Name: vioD [H]

Synonym: Franean1_4331

Alternate gene names: 158316113

Gene position: 5175067-5173712 (Counterclockwise)

Preceding gene: 158316114

Following gene: 158316111

Centisome position: 57.62

GC content: 75.0

Gene sequence:

>1356_bases
GTGAGGATCGTCTGTGTAGGCGGGGGCCCGGCCGGGCTCTACTTCGCCATCTCCGCCAAGCGCCGGGACGCCGGCCACGA
GATCACCATCATCGACCGCGACCCGCCCGGCGCCACCTACGGCTGGGGTGTCGTCTACTGGGACAACCTGCTCGACGTCC
TGTTCCGCAACGATCCCGACAGCGCGCGGGAGATCCGCGGCGCGTCCACGCTCTGGCAGGAGCAGGACATCAGCCTGGGC
AGCGAACGGGCGGCGCACTTCGCCGGCTACGGCTTCAGCGTGCAGCGCGCGGCCCTGCTCGACATCCTCACCCGGCGCGC
CGAGGAGCTCGGCGTGCGGGTCGAGCACGACCGCGAGGTCGCCGACCTCACCGACCTGGCGGACCTGGGGTGCCTCGGCG
GCCTCGGCGCGCACGCCGACGCCGACCTTGTGATCGCCGCCGACGGCGCGAACAGCCAGGTGCGCAGCATGTTCGCGGAC
CGGTTCGGCACCCGGGTCGACACCGGTGGCAACCGCTACATCTGGCTGGGCACGCCCCGGCGCTTCGAGCGCTTCACGTT
CGCGTTCGAGCCGACCCCGGCCGGCTGGGTGTGGTTCCACGCCTACCCGTCCGGGGCGGAGGTGAGCACCTGCATCGTCG
AGTGCGCGCCGCGGACCTGGGACGCGCTCGGCCTCGGCACGGACGACGGCGAGGGACTACGCCTGCTCGGGAAGATCTTC
GCTGGCCCGCTGGCCGGCGAGGGCCTGATCGACCAGCTGCGCCGGCCCGCCCGCTGGCAGCGGTTCGGCCAGGTCAGCAA
CCGTAGCTGGTACTGGGACAACATGGTGCTGCTGGGCGACGCCGCCCACACCACCCACTTCACGCTCGGCTCCGGCACGG
CCCTGGCCATGATGGATGGCGTCATGCTCGCCCAGATGCTCTACGAGCACGGCGAGGTCCCGGTGGCGCTGGCCGAGTTC
GACCGGGCCGGCCGGGCCGCGCTGGCCCCGCTGCAGGCCCGGGCCCGGACGAGCATGGCCTGGTTCGAGCGGATCGACGG
CCAGCTCGACCGGGCCAGGCCGGCCACCGGCGGCGACCCCGACCCGGTGGCCTTCGCCTACGCGATGGCCACCCGGCAGG
GCGACCAGCCGCCATGGCGGTACCAGGCACACCGGGCGATGCAGGTCGGGGCCGTCCGGCGGCTGCGCCGTGAGGTCGAC
TCGTCGGTGCGCTGGTACCTGGCCCGCCGGCGCGGCGAACCGGCCCGGCCCGCCGGCCGGCCGGCGCCGGCCGGCACCCC
CACGCCCGCAGGCCCGGCCGGCCGGGCCCTGGCGGGCGCGGGTTCCGGGTCCGCCGCGCACCGCTCCCGCGGTTAG

Upstream 100 bases:

>100_bases
GCAGGTCGGCGAGCAAGGGCCCGCGCTGCGCGGCCTCGCCCCATTTACGGGCACCGGTCCCGAACGGTGCCGACGAGGAT
TTCGCGACCAGGGGGGTCTC

Downstream 100 bases:

>100_bases
CCCGCCGGCGTCAGGTGCGCCGCCAGATCACCGGGACCTGCTTGGTGAAGGACCCCGCGTGGCCGACCACCAGGCCCGAC
CGGTTGATCCCGGACACCTG

Product: FAD-binding monooxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 451; Mature: 451

Protein sequence:

>451_residues
MRIVCVGGGPAGLYFAISAKRRDAGHEITIIDRDPPGATYGWGVVYWDNLLDVLFRNDPDSAREIRGASTLWQEQDISLG
SERAAHFAGYGFSVQRAALLDILTRRAEELGVRVEHDREVADLTDLADLGCLGGLGAHADADLVIAADGANSQVRSMFAD
RFGTRVDTGGNRYIWLGTPRRFERFTFAFEPTPAGWVWFHAYPSGAEVSTCIVECAPRTWDALGLGTDDGEGLRLLGKIF
AGPLAGEGLIDQLRRPARWQRFGQVSNRSWYWDNMVLLGDAAHTTHFTLGSGTALAMMDGVMLAQMLYEHGEVPVALAEF
DRAGRAALAPLQARARTSMAWFERIDGQLDRARPATGGDPDPVAFAYAMATRQGDQPPWRYQAHRAMQVGAVRRLRREVD
SSVRWYLARRRGEPARPAGRPAPAGTPTPAGPAGRALAGAGSGSAAHRSRG

Sequences:

>Translated_451_residues
MRIVCVGGGPAGLYFAISAKRRDAGHEITIIDRDPPGATYGWGVVYWDNLLDVLFRNDPDSAREIRGASTLWQEQDISLG
SERAAHFAGYGFSVQRAALLDILTRRAEELGVRVEHDREVADLTDLADLGCLGGLGAHADADLVIAADGANSQVRSMFAD
RFGTRVDTGGNRYIWLGTPRRFERFTFAFEPTPAGWVWFHAYPSGAEVSTCIVECAPRTWDALGLGTDDGEGLRLLGKIF
AGPLAGEGLIDQLRRPARWQRFGQVSNRSWYWDNMVLLGDAAHTTHFTLGSGTALAMMDGVMLAQMLYEHGEVPVALAEF
DRAGRAALAPLQARARTSMAWFERIDGQLDRARPATGGDPDPVAFAYAMATRQGDQPPWRYQAHRAMQVGAVRRLRREVD
SSVRWYLARRRGEPARPAGRPAPAGTPTPAGPAGRALAGAGSGSAAHRSRG
>Mature_451_residues
MRIVCVGGGPAGLYFAISAKRRDAGHEITIIDRDPPGATYGWGVVYWDNLLDVLFRNDPDSAREIRGASTLWQEQDISLG
SERAAHFAGYGFSVQRAALLDILTRRAEELGVRVEHDREVADLTDLADLGCLGGLGAHADADLVIAADGANSQVRSMFAD
RFGTRVDTGGNRYIWLGTPRRFERFTFAFEPTPAGWVWFHAYPSGAEVSTCIVECAPRTWDALGLGTDDGEGLRLLGKIF
AGPLAGEGLIDQLRRPARWQRFGQVSNRSWYWDNMVLLGDAAHTTHFTLGSGTALAMMDGVMLAQMLYEHGEVPVALAEF
DRAGRAALAPLQARARTSMAWFERIDGQLDRARPATGGDPDPVAFAYAMATRQGDQPPWRYQAHRAMQVGAVRRLRREVD
SSVRWYLARRRGEPARPAGRPAPAGTPTPAGPAGRALAGAGSGSAAHRSRG

Specific function: Unknown

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49026; Mature: 49026

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIVCVGGGPAGLYFAISAKRRDAGHEITIIDRDPPGATYGWGVVYWDNLLDVLFRNDPD
CEEEEECCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCC
SAREIRGASTLWQEQDISLGSERAAHFAGYGFSVQRAALLDILTRRAEELGVRVEHDREV
HHHHHCCHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCH
ADLTDLADLGCLGGLGAHADADLVIAADGANSQVRSMFADRFGTRVDTGGNRYIWLGTPR
HHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCEEECCCCEEEEECCCC
RFERFTFAFEPTPAGWVWFHAYPSGAEVSTCIVECAPRTWDALGLGTDDGEGLRLLGKIF
CCCEEEEEECCCCCCEEEEEECCCCCCHHHHHEECCCCCCCEEECCCCCCCHHHHHHHHH
AGPLAGEGLIDQLRRPARWQRFGQVSNRSWYWDNMVLLGDAAHTTHFTLGSGTALAMMDG
CCCCCCCHHHHHHCCCHHHHHHHCCCCCCEEECCEEEEECCCCCEEEEECCCCHHHHHHH
VMLAQMLYEHGEVPVALAEFDRAGRAALAPLQARARTSMAWFERIDGQLDRARPATGGDP
HHHHHHHHHCCCCCEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCC
DPVAFAYAMATRQGDQPPWRYQAHRAMQVGAVRRLRREVDSSVRWYLARRRGEPARPAGR
CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PAPAGTPTPAGPAGRALAGAGSGSAAHRSRG
CCCCCCCCCCCCCCCEEECCCCCCCCCCCCC
>Mature Secondary Structure
MRIVCVGGGPAGLYFAISAKRRDAGHEITIIDRDPPGATYGWGVVYWDNLLDVLFRNDPD
CEEEEECCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCC
SAREIRGASTLWQEQDISLGSERAAHFAGYGFSVQRAALLDILTRRAEELGVRVEHDREV
HHHHHCCHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCH
ADLTDLADLGCLGGLGAHADADLVIAADGANSQVRSMFADRFGTRVDTGGNRYIWLGTPR
HHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCEEECCCCEEEEECCCC
RFERFTFAFEPTPAGWVWFHAYPSGAEVSTCIVECAPRTWDALGLGTDDGEGLRLLGKIF
CCCEEEEEECCCCCCEEEEEECCCCCCHHHHHEECCCCCCCEEECCCCCCCHHHHHHHHH
AGPLAGEGLIDQLRRPARWQRFGQVSNRSWYWDNMVLLGDAAHTTHFTLGSGTALAMMDG
CCCCCCCHHHHHHCCCHHHHHHHCCCCCCEEECCEEEEECCCCCEEEEECCCCHHHHHHH
VMLAQMLYEHGEVPVALAEFDRAGRAALAPLQARARTSMAWFERIDGQLDRARPATGGDP
HHHHHHHHHCCCCCEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCC
DPVAFAYAMATRQGDQPPWRYQAHRAMQVGAVRRLRREVDSSVRWYLARRRGEPARPAGR
CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PAPAGTPTPAGPAGRALAGAGSGSAAHRSRG
CCCCCCCCCCCCCCCEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11075927; 14500782 [H]