| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316094
Identifier: 158316094
GI number: 158316094
Start: 5151241
End: 5152419
Strand: Reverse
Name: 158316094
Synonym: Franean1_4312
Alternate gene names: NA
Gene position: 5152419-5151241 (Counterclockwise)
Preceding gene: 158316095
Following gene: 158316093
Centisome position: 57.36
GC content: 65.82
Gene sequence:
>1179_bases ATGTCTACGCGAGTGCCGCCGTACCCGATCTTCGACGCGGACAACCACCTGTACGAGACCCAGGACGCGTTCACCAAGTA CCTGCCCGAGGAGTTCAAGGGCGCGATCCGGTACGTCGAGGTGGACGGCCGGACCAAGATCGCCGTCCGGGGTCACATCA GCGAGTACATCCCCAATCCGACCTTCGAGGTCGTCGCCCGGCCCGGTGCGCAGGAGGACTACTTCCGCATCGGAAACCCG GAGGGCAAGTCCTACCGGGAGATCATCGGTAAGCCGATGCGCTCGATCCCGGCCTTCCGCGAGCCGAAGTCCCGCCTCGA GCTCATGGACGAGCAGGGCATCGAGCGGACGCTGATGTTCCCGACGCTCGCGAGTCTGCTCGAGGAGCGGATGAGCGACG ACCCGGAGCTGACCCACATCGTCATCCACGCGCTCAACGAGTGGCTGTACGAGACGTGGCAGTTCAACTACGAGAACCGG ATCTTCACCACCCCGGTGATCACGCTGCCGATCGTGGAGAAGGCGATCGAGGAGCTGGAGTGGGTCGTCGAGCGCGGTGC GCGGGCGATCCTGATCCGTCCGGCGCCGGTCCCCGGGTTCAGCGGCTCGCGGTCGTTCGGCCTGCCGGAGTTCGACCCGT TCTGGGAGAAGGTCGTCGAGCACGACCTGCTGGTCACGCTGCACTCCTCGGACAGCGGCTACAGCCGTTACACCGACGAC TGGGAGAGCAACAAGCGCGAGTTCCTGCCGTTCCAGCCGGACGTGTTCCGGATGATCGGCCAGTGGCGGCCGATCGAGGA CTCGGTGGCCGCGCTGATCTGCCACGGCGCGCTGTCCCGGTTCCCGAGCCTGAAGATCGCCGTAGTCGAGAACGGCGCCT CCTGGGTCGGCCCGCTGATCAAGACCCTGAAGGACGTCTACAAGAAGTACCCGCAGCAGTTCGCCGAGGAGCCGGTGTCG GTGCTGCGGCGCAACGTGCACATCAGCCCGTTCTGGGAAGAGAACATGGCCGACCTCGCCGAGCTGCTCGGCGTCGAGCG GGTGCTGTTCGGCTCGGACTTCCCGCACCCCGAGGGCCTCGGTGACCCGGCCAGCTTCGTCGACGAGCTCAAGAACCTCA CCGACGAGGAGAAGGCCCTGATCATGGGCGGAAACCTGGCCAGGCTGATCTCGGGATGA
Upstream 100 bases:
>100_bases CGCCGTCCCGCAGGGGGGCCGGCAGGGGGACCCGTCGGGACACATTGCGGCTGGGCAGGGAAGAGAATAGGGTTCTCCTT ATCAGTAAGGGAGGATCTCA
Downstream 100 bases:
>100_bases AATGGGAAACCATCCCGGAGATGGTGCTGAGCGCGGCCGACCGCTTCGACGACGCCGAGGCGGTCGTCGACGGTGCGCTG CGCCTCACCTACACCGAGCT
Product: amidohydrolase 2
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MSTRVPPYPIFDADNHLYETQDAFTKYLPEEFKGAIRYVEVDGRTKIAVRGHISEYIPNPTFEVVARPGAQEDYFRIGNP EGKSYREIIGKPMRSIPAFREPKSRLELMDEQGIERTLMFPTLASLLEERMSDDPELTHIVIHALNEWLYETWQFNYENR IFTTPVITLPIVEKAIEELEWVVERGARAILIRPAPVPGFSGSRSFGLPEFDPFWEKVVEHDLLVTLHSSDSGYSRYTDD WESNKREFLPFQPDVFRMIGQWRPIEDSVAALICHGALSRFPSLKIAVVENGASWVGPLIKTLKDVYKKYPQQFAEEPVS VLRRNVHISPFWEENMADLAELLGVERVLFGSDFPHPEGLGDPASFVDELKNLTDEEKALIMGGNLARLISG
Sequences:
>Translated_392_residues MSTRVPPYPIFDADNHLYETQDAFTKYLPEEFKGAIRYVEVDGRTKIAVRGHISEYIPNPTFEVVARPGAQEDYFRIGNP EGKSYREIIGKPMRSIPAFREPKSRLELMDEQGIERTLMFPTLASLLEERMSDDPELTHIVIHALNEWLYETWQFNYENR IFTTPVITLPIVEKAIEELEWVVERGARAILIRPAPVPGFSGSRSFGLPEFDPFWEKVVEHDLLVTLHSSDSGYSRYTDD WESNKREFLPFQPDVFRMIGQWRPIEDSVAALICHGALSRFPSLKIAVVENGASWVGPLIKTLKDVYKKYPQQFAEEPVS VLRRNVHISPFWEENMADLAELLGVERVLFGSDFPHPEGLGDPASFVDELKNLTDEEKALIMGGNLARLISG >Mature_391_residues STRVPPYPIFDADNHLYETQDAFTKYLPEEFKGAIRYVEVDGRTKIAVRGHISEYIPNPTFEVVARPGAQEDYFRIGNPE GKSYREIIGKPMRSIPAFREPKSRLELMDEQGIERTLMFPTLASLLEERMSDDPELTHIVIHALNEWLYETWQFNYENRI FTTPVITLPIVEKAIEELEWVVERGARAILIRPAPVPGFSGSRSFGLPEFDPFWEKVVEHDLLVTLHSSDSGYSRYTDDW ESNKREFLPFQPDVFRMIGQWRPIEDSVAALICHGALSRFPSLKIAVVENGASWVGPLIKTLKDVYKKYPQQFAEEPVSV LRRNVHISPFWEENMADLAELLGVERVLFGSDFPHPEGLGDPASFVDELKNLTDEEKALIMGGNLARLISG
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44843; Mature: 44712
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTRVPPYPIFDADNHLYETQDAFTKYLPEEFKGAIRYVEVDGRTKIAVRGHISEYIPNP CCCCCCCCCEECCCCCCHHHHHHHHHHCCHHHHCCEEEEEECCCEEEEEECCHHHHCCCC TFEVVARPGAQEDYFRIGNPEGKSYREIIGKPMRSIPAFREPKSRLELMDEQGIERTLMF CCEEEECCCCCCCCEECCCCCCCHHHHHHCCHHHHCCCCCCCHHHHHHHHHCCCHHHHHH PTLASLLEERMSDDPELTHIVIHALNEWLYETWQFNYENRIFTTPVITLPIVEKAIEELE HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHH WVVERGARAILIRPAPVPGFSGSRSFGLPEFDPFWEKVVEHDLLVTLHSSDSGYSRYTDD HHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCC WESNKREFLPFQPDVFRMIGQWRPIEDSVAALICHGALSRFPSLKIAVVENGASWVGPLI HHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHH KTLKDVYKKYPQQFAEEPVSVLRRNVHISPFWEENMADLAELLGVERVLFGSDFPHPEGL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GDPASFVDELKNLTDEEKALIMGGNLARLISG CCHHHHHHHHHCCCCCCCEEEECCCHHHHHCC >Mature Secondary Structure STRVPPYPIFDADNHLYETQDAFTKYLPEEFKGAIRYVEVDGRTKIAVRGHISEYIPNP CCCCCCCCEECCCCCCHHHHHHHHHHCCHHHHCCEEEEEECCCEEEEEECCHHHHCCCC TFEVVARPGAQEDYFRIGNPEGKSYREIIGKPMRSIPAFREPKSRLELMDEQGIERTLMF CCEEEECCCCCCCCEECCCCCCCHHHHHHCCHHHHCCCCCCCHHHHHHHHHCCCHHHHHH PTLASLLEERMSDDPELTHIVIHALNEWLYETWQFNYENRIFTTPVITLPIVEKAIEELE HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHH WVVERGARAILIRPAPVPGFSGSRSFGLPEFDPFWEKVVEHDLLVTLHSSDSGYSRYTDD HHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCC WESNKREFLPFQPDVFRMIGQWRPIEDSVAALICHGALSRFPSLKIAVVENGASWVGPLI HHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHH KTLKDVYKKYPQQFAEEPVSVLRRNVHISPFWEENMADLAELLGVERVLFGSDFPHPEGL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GDPASFVDELKNLTDEEKALIMGGNLARLISG CCHHHHHHHHHCCCCCCCEEEECCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA