| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316049
Identifier: 158316049
GI number: 158316049
Start: 5094235
End: 5094807
Strand: Reverse
Name: 158316049
Synonym: Franean1_4267
Alternate gene names: NA
Gene position: 5094807-5094235 (Counterclockwise)
Preceding gene: 158316051
Following gene: 158316048
Centisome position: 56.72
GC content: 80.1
Gene sequence:
>573_bases ATGCGAGAGACCACGCCGCCGGGCGCCCCGGCGAGCACGGTGGGCCCGACAAGCACGGCGGGCGACCAGGCGGCCCGGGG CGGCTGGCCGCGCCCGGCCCGGCGGCTGGCCAGGGCCCTCGGGCGCGGCGGTGCCGGGCGCCTCGCCCACCAGCGATCGC GCATCGAGGTAGGGGACGACTGGCGCCGCTGCGGAGCAGGTGACGGTGGCTGTGGCGTGCTGCTGCCCCTGAGCCAGCAG ACCTGCCCCCGCTGTGGCCGGACGAACCGCGAGGACCTGGCGCCGCTGAACGTTCGCAGGCTGCTGCCCACCCACGACGC CTACGAGCACGCCCTGGCGGTCCTGCGGGGAACCCCGCCGGGACGGGACCCGACAGCCGGCGCGACGCCCCCGACCGACG CGACGCCCCCGACCGACGCGACGCCCCCGACCGACGCGACGCCCCCGACCGACGCGACGCCCCCGACCGACGAGGCGGCC CCGACCGACGAGGCGGCCCCGGCAGGTAAGGCGGCCCGCGAGCCGGCGCCGGGCGTGCCGGGATCGGCGGACCACCCCGG AGCGCCGCGCTGA
Upstream 100 bases:
>100_bases GGCCGGGGCCGGTGCGGCCGGTGACCGAAGCCGGTGCGGGAGGCCGGTGAGCGAGGCCGGGACATCACCGCCATCGCCCG ACAGAGGAGCGAGGACGCGC
Downstream 100 bases:
>100_bases CCGGTGCTCCGGCGGCGGCGCCGCAGGCCGCGCCGAGCCCGCGGGCACCGCTCCCGCGCTGGCGCGGCCCGTTGTTGTCG GGCAGCCCGGACGAGATTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MRETTPPGAPASTVGPTSTAGDQAARGGWPRPARRLARALGRGGAGRLAHQRSRIEVGDDWRRCGAGDGGCGVLLPLSQQ TCPRCGRTNREDLAPLNVRRLLPTHDAYEHALAVLRGTPPGRDPTAGATPPTDATPPTDATPPTDATPPTDATPPTDEAA PTDEAAPAGKAAREPAPGVPGSADHPGAPR
Sequences:
>Translated_190_residues MRETTPPGAPASTVGPTSTAGDQAARGGWPRPARRLARALGRGGAGRLAHQRSRIEVGDDWRRCGAGDGGCGVLLPLSQQ TCPRCGRTNREDLAPLNVRRLLPTHDAYEHALAVLRGTPPGRDPTAGATPPTDATPPTDATPPTDATPPTDATPPTDEAA PTDEAAPAGKAAREPAPGVPGSADHPGAPR >Mature_190_residues MRETTPPGAPASTVGPTSTAGDQAARGGWPRPARRLARALGRGGAGRLAHQRSRIEVGDDWRRCGAGDGGCGVLLPLSQQ TCPRCGRTNREDLAPLNVRRLLPTHDAYEHALAVLRGTPPGRDPTAGATPPTDATPPTDATPPTDATPPTDATPPTDEAA PTDEAAPAGKAAREPAPGVPGSADHPGAPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19364; Mature: 19364
Theoretical pI: Translated: 7.98; Mature: 7.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRETTPPGAPASTVGPTSTAGDQAARGGWPRPARRLARALGRGGAGRLAHQRSRIEVGDD CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCH WRRCGAGDGGCGVLLPLSQQTCPRCGRTNREDLAPLNVRRLLPTHDAYEHALAVLRGTPP HHHHCCCCCCCEEEEECCHHHCHHCCCCCHHHCCCCHHHHHCCCCHHHHHHHHHHHCCCC GRDPTAGATPPTDATPPTDATPPTDATPPTDATPPTDEAAPTDEAAPAGKAAREPAPGVP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GSADHPGAPR CCCCCCCCCC >Mature Secondary Structure MRETTPPGAPASTVGPTSTAGDQAARGGWPRPARRLARALGRGGAGRLAHQRSRIEVGDD CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCH WRRCGAGDGGCGVLLPLSQQTCPRCGRTNREDLAPLNVRRLLPTHDAYEHALAVLRGTPP HHHHCCCCCCCEEEEECCHHHCHHCCCCCHHHCCCCHHHHHCCCCHHHHHHHHHHHCCCC GRDPTAGATPPTDATPPTDATPPTDATPPTDATPPTDEAAPTDEAAPAGKAAREPAPGVP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GSADHPGAPR CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA