| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316051
Identifier: 158316051
GI number: 158316051
Start: 5101625
End: 5102671
Strand: Reverse
Name: 158316051
Synonym: Franean1_4269
Alternate gene names: NA
Gene position: 5102671-5101625 (Counterclockwise)
Preceding gene: 158316054
Following gene: 158316049
Centisome position: 56.81
GC content: 64.95
Gene sequence:
>1047_bases ATGGAAAGGCTTCGTGTCATCCAGTGGACCACCGGAAAAGTGGGCAAGCTGACGTTACGGGCGATACTTGATGATCCGCG TCTGGACCTTGTGGGTGTGTACGCCTGGTCGGCGGACAAGGTCGGCACCGATGCGGGAACGCTGTGCGGTCGGCCGCCGT GTGGCGTCGCGGCGACCAACGACATCGACGCCTTGATCGCGCTCAAGGCGGACACTGTCGTCTACACCCCTTTCATGGCC GATCTCGACCATGTCCTGCCGCTGCTTGAGGCGGGAATGGACGTGATCAGCACCAACCTGTTCTTCAACGTCGGCGGAGT CAAGGGGGAGACGAAGGAGCGGCTGGAGGCCGCCTGCGCCCGCGGGAGCAGCTCGCTCTACATCACGGGCATAAGCCCCG GGTGGATCAACACGATGGTGACGGCCATGACCGGCGTGTGTCGGGACGTGCGGAAGATCTCCATCCTGGAGGCCGCCGAC TGCTCCGTCTACGAGTCGAAGGAGACCTGGGAGGCCATGGGCATCTCCCGGACCGGCACCACACCGCAGATCGCCGACAT GGCGAAGCTGTGGATGATGCCGGCCGAGGAAGCCGTGCAGCGCATGGCGCACGCCCTGGAATACACGCTCGACAGTGTCG AGTTCTTCCTCGGCTACGCCACCGCCTCCCAGACGGTCGACCTGGGCTACATGACCATCGAGAAGGGCACGAACGCCGCT GTGGAGGTCGGCTGGAACGGCAACCTGGGCGGCAGCACGGTCATCCAGATGAAGTTCCGCTGGTACCTGACCAAGAATCT GAATGAGGACTGGGAGTTCAACGACGACCAGTACCGCGTGGTCATCGACGGGGAGCCGGGGATCGACACCCGGATCCGCT TCATCCCGCCCGAGCACTGGGGCAACCACGAGTGGGACACCATGACCGCCCTGCCCGCGGTCAACGCCGCCTTCAACGTC AAGGCCGCAAGGCCCGGGATCCTGCACCTGACCGACGTCGGCCTGCCCCGCGCGCCAGCCGGGCAATGGCATGCAGCGCG GGAGTGA
Upstream 100 bases:
>100_bases CCGCTCCCGGTGTCGGCCGGCGTCGAAGGTGCGGACGGCAGCGGGTCCGACACCCGTATCGGGGCGGCAGGGCGCTTCAA CCGAGAGGGCGGGCAGGCGT
Downstream 100 bases:
>100_bases AACCCGGCGGACGGTGTGACAGATGATCCAGGCCGGGGGCTCGACAACACCCCCGGCCTGGACCGGGTTCGGGCTGGCGT GGGGGCATGGGGCTTTGGTG
Product: dihydrodipicolinate reductase
Products: NA
Alternate protein names: Dihydrodipicolinate Reductase N-Terminus Domain Protein; Dihydrodipicolinate Reductase-Like Protein; Dihydropicolinate Reductase
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MERLRVIQWTTGKVGKLTLRAILDDPRLDLVGVYAWSADKVGTDAGTLCGRPPCGVAATNDIDALIALKADTVVYTPFMA DLDHVLPLLEAGMDVISTNLFFNVGGVKGETKERLEAACARGSSSLYITGISPGWINTMVTAMTGVCRDVRKISILEAAD CSVYESKETWEAMGISRTGTTPQIADMAKLWMMPAEEAVQRMAHALEYTLDSVEFFLGYATASQTVDLGYMTIEKGTNAA VEVGWNGNLGGSTVIQMKFRWYLTKNLNEDWEFNDDQYRVVIDGEPGIDTRIRFIPPEHWGNHEWDTMTALPAVNAAFNV KAARPGILHLTDVGLPRAPAGQWHAARE
Sequences:
>Translated_348_residues MERLRVIQWTTGKVGKLTLRAILDDPRLDLVGVYAWSADKVGTDAGTLCGRPPCGVAATNDIDALIALKADTVVYTPFMA DLDHVLPLLEAGMDVISTNLFFNVGGVKGETKERLEAACARGSSSLYITGISPGWINTMVTAMTGVCRDVRKISILEAAD CSVYESKETWEAMGISRTGTTPQIADMAKLWMMPAEEAVQRMAHALEYTLDSVEFFLGYATASQTVDLGYMTIEKGTNAA VEVGWNGNLGGSTVIQMKFRWYLTKNLNEDWEFNDDQYRVVIDGEPGIDTRIRFIPPEHWGNHEWDTMTALPAVNAAFNV KAARPGILHLTDVGLPRAPAGQWHAARE >Mature_348_residues MERLRVIQWTTGKVGKLTLRAILDDPRLDLVGVYAWSADKVGTDAGTLCGRPPCGVAATNDIDALIALKADTVVYTPFMA DLDHVLPLLEAGMDVISTNLFFNVGGVKGETKERLEAACARGSSSLYITGISPGWINTMVTAMTGVCRDVRKISILEAAD CSVYESKETWEAMGISRTGTTPQIADMAKLWMMPAEEAVQRMAHALEYTLDSVEFFLGYATASQTVDLGYMTIEKGTNAA VEVGWNGNLGGSTVIQMKFRWYLTKNLNEDWEFNDDQYRVVIDGEPGIDTRIRFIPPEHWGNHEWDTMTALPAVNAAFNV KAARPGILHLTDVGLPRAPAGQWHAARE
Specific function: Unknown
COG id: COG3804
COG function: function code S; Uncharacterized conserved protein related to dihydrodipicolinate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38162; Mature: 38162
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERLRVIQWTTGKVGKLTLRAILDDPRLDLVGVYAWSADKVGTDAGTLCGRPPCGVAATN CCCEEEEEECCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCEECC DIDALIALKADTVVYTPFMADLDHVLPLLEAGMDVISTNLFFNVGGVKGETKERLEAACA CCEEEEEEECCEEEECHHHHHHHHHHHHHHCCHHHEEEEEEEEECCCCCCHHHHHHHHHH RGSSSLYITGISPGWINTMVTAMTGVCRDVRKISILEAADCSVYESKETWEAMGISRTGT CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCEECCCHHHHHHCCCCCCC TPQIADMAKLWMMPAEEAVQRMAHALEYTLDSVEFFLGYATASQTVDLGYMTIEKGTNAA CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEEEEECCCCEE VEVGWNGNLGGSTVIQMKFRWYLTKNLNEDWEFNDDQYRVVIDGEPGIDTRIRFIPPEHW EEECCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCC GNHEWDTMTALPAVNAAFNVKAARPGILHLTDVGLPRAPAGQWHAARE CCCCCCCEECCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MERLRVIQWTTGKVGKLTLRAILDDPRLDLVGVYAWSADKVGTDAGTLCGRPPCGVAATN CCCEEEEEECCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCEECC DIDALIALKADTVVYTPFMADLDHVLPLLEAGMDVISTNLFFNVGGVKGETKERLEAACA CCEEEEEEECCEEEECHHHHHHHHHHHHHHCCHHHEEEEEEEEECCCCCCHHHHHHHHHH RGSSSLYITGISPGWINTMVTAMTGVCRDVRKISILEAADCSVYESKETWEAMGISRTGT CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCEECCCHHHHHHCCCCCCC TPQIADMAKLWMMPAEEAVQRMAHALEYTLDSVEFFLGYATASQTVDLGYMTIEKGTNAA CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEEEEECCCCEE VEVGWNGNLGGSTVIQMKFRWYLTKNLNEDWEFNDDQYRVVIDGEPGIDTRIRFIPPEHW EEECCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCC GNHEWDTMTALPAVNAAFNVKAARPGILHLTDVGLPRAPAGQWHAARE CCCCCCCEECCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA