| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316048
Identifier: 158316048
GI number: 158316048
Start: 5093163
End: 5094035
Strand: Reverse
Name: 158316048
Synonym: Franean1_4266
Alternate gene names: NA
Gene position: 5094035-5093163 (Counterclockwise)
Preceding gene: 158316049
Following gene: 158316047
Centisome position: 56.71
GC content: 70.45
Gene sequence:
>873_bases ATGTACTCCGCCGAGATCAATCGCAAGCAGCCGGCCTGTCTGCTGCTCGTCATCGATCACTCGACGTCGATGGCCGAGAC CTGGGCCGGTGGCGCGATGAGCAAGGCAGACCAGCTCGCGCTCGCCGTCAATCGGCTTCTCGGCAACGCCGTGCTGCTCT GCAGTAAAGGTGACGACCGCGTCTACGACTATTTCGAGGTAGGAATTCTGGGCTATGGGCGCGGTGTGTCGCCCGTCCTG TACGGCTCGAGCGCGAGCCGGCCGCTGCTGCCCATCAGCGAGGTCGCGCTGAACCCGAACCGGGTCGACCATGTGCTGCG CCGGATCTCCGACGGCGCCGGGGGCCTGGTCGAGGTGCAGACGCCAATCCCGGCCTGGGTCGACCCGGTCGCGGACGGCT GGACCCCGATGGCGGAGGCGCTGACGACGGCCGCCTGGATCGTCGACGAGTGGTGCCGGGGGCACGCCTCCAGCTTCCCG CCGATCGTGGTCAACGTCACCGACGGTCAGAGCACGGACGGTGACCCGCGGATCGCCGCCGCCCGGGTGCGGGCCGCCGG CACGGCGGACGGCGACGCGCTGCTGTTCAACGCCCACCTGTCGGCCACGGCGCGCAACGCTGTCACCTTTCCCGACGACC GGGCCGATCTGCCCGACGACTTCGCCCGCGCGCTGTTCGACATGTCGAGCGCGCTGCCCCCCACGATGGTGGCGGCGGCC GGCAGCCTGGGATATCCCGCCGGCACGGGCTCGCGGGGATTCCTCTACAACGCCGACGTCACCGCGTTGATCGAGTTCCT CGACATCGGGACCCGCGCGGTCACGCCGACCGGCCTGCGTGACCTCACCGTCGGGCCGCGGTCGGCGGGATGA
Upstream 100 bases:
>100_bases CGGCGCGCATTCATCAAAAGGTGTTACCGGGCCGGGCGCGGACTGTTGTCGAGCGCCACCGGAGCGTCGGAATGGCCAGG CGATATGAAACGATAAGGAC
Downstream 100 bases:
>100_bases CCCCGCTGCCCGCCACGGCGACGTCCGCGCGCCCGGCGACCGCCTCGCCGGCACCGTCGCAGCCGGCACTGTCGCAGCCG GCACTGTCGCAGCCGGCACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MYSAEINRKQPACLLLVIDHSTSMAETWAGGAMSKADQLALAVNRLLGNAVLLCSKGDDRVYDYFEVGILGYGRGVSPVL YGSSASRPLLPISEVALNPNRVDHVLRRISDGAGGLVEVQTPIPAWVDPVADGWTPMAEALTTAAWIVDEWCRGHASSFP PIVVNVTDGQSTDGDPRIAAARVRAAGTADGDALLFNAHLSATARNAVTFPDDRADLPDDFARALFDMSSALPPTMVAAA GSLGYPAGTGSRGFLYNADVTALIEFLDIGTRAVTPTGLRDLTVGPRSAG
Sequences:
>Translated_290_residues MYSAEINRKQPACLLLVIDHSTSMAETWAGGAMSKADQLALAVNRLLGNAVLLCSKGDDRVYDYFEVGILGYGRGVSPVL YGSSASRPLLPISEVALNPNRVDHVLRRISDGAGGLVEVQTPIPAWVDPVADGWTPMAEALTTAAWIVDEWCRGHASSFP PIVVNVTDGQSTDGDPRIAAARVRAAGTADGDALLFNAHLSATARNAVTFPDDRADLPDDFARALFDMSSALPPTMVAAA GSLGYPAGTGSRGFLYNADVTALIEFLDIGTRAVTPTGLRDLTVGPRSAG >Mature_290_residues MYSAEINRKQPACLLLVIDHSTSMAETWAGGAMSKADQLALAVNRLLGNAVLLCSKGDDRVYDYFEVGILGYGRGVSPVL YGSSASRPLLPISEVALNPNRVDHVLRRISDGAGGLVEVQTPIPAWVDPVADGWTPMAEALTTAAWIVDEWCRGHASSFP PIVVNVTDGQSTDGDPRIAAARVRAAGTADGDALLFNAHLSATARNAVTFPDDRADLPDDFARALFDMSSALPPTMVAAA GSLGYPAGTGSRGFLYNADVTALIEFLDIGTRAVTPTGLRDLTVGPRSAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30439; Mature: 30439
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSAEINRKQPACLLLVIDHSTSMAETWAGGAMSKADQLALAVNRLLGNAVLLCSKGDDR CCCCCCCCCCCEEEEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCC VYDYFEVGILGYGRGVSPVLYGSSASRPLLPISEVALNPNRVDHVLRRISDGAGGLVEVQ EEEHEEEEEEECCCCCCEEEECCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCCEEEEC TPIPAWVDPVADGWTPMAEALTTAAWIVDEWCRGHASSFPPIVVNVTDGQSTDGDPRIAA CCCCHHHCHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEE ARVRAAGTADGDALLFNAHLSATARNAVTFPDDRADLPDDFARALFDMSSALPPTMVAAA EHEEECCCCCCCEEEEEEECCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHC GSLGYPAGTGSRGFLYNADVTALIEFLDIGTRAVTPTGLRDLTVGPRSAG CCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCCC >Mature Secondary Structure MYSAEINRKQPACLLLVIDHSTSMAETWAGGAMSKADQLALAVNRLLGNAVLLCSKGDDR CCCCCCCCCCCEEEEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCC VYDYFEVGILGYGRGVSPVLYGSSASRPLLPISEVALNPNRVDHVLRRISDGAGGLVEVQ EEEHEEEEEEECCCCCCEEEECCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCCEEEEC TPIPAWVDPVADGWTPMAEALTTAAWIVDEWCRGHASSFPPIVVNVTDGQSTDGDPRIAA CCCCHHHCHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEE ARVRAAGTADGDALLFNAHLSATARNAVTFPDDRADLPDDFARALFDMSSALPPTMVAAA EHEEECCCCCCCEEEEEEECCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHC GSLGYPAGTGSRGFLYNADVTALIEFLDIGTRAVTPTGLRDLTVGPRSAG CCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA