| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158316047
Identifier: 158316047
GI number: 158316047
Start: 5092216
End: 5093166
Strand: Reverse
Name: 158316047
Synonym: Franean1_4265
Alternate gene names: NA
Gene position: 5093166-5092216 (Counterclockwise)
Preceding gene: 158316048
Following gene: 158316046
Centisome position: 56.7
GC content: 75.5
Gene sequence:
>951_bases ATGACCCCGCTGCCCGCCACGGCGACGTCCGCGCGCCCGGCGACCGCCTCGCCGGCACCGTCGCAGCCGGCACTGTCGCA GCCGGCACTGTCGCAGCCGGCACTGTCGCAGCCGGCACTGTCGCAGCCGGCACTGTCGCAGCCGGCACTGTCGCAGCCGG CACTGTCGCAGCCGGCACTGTCGCAGCCGGCACTGTCGCAGCCGGCACCGCCGCCCGCGCCGAAACCCACGCCCATGCCC TCGGGAGCGGCCGTTGCTCTGGCGGCCACGGCCCACTCGGTGGCGAGGCTCGGCCGGTCGCCGGCGGAGAACGAGGACAG CTGCGCGATCCGGCCGGAGCTCGGCCGGTTCGCCGTGGCCGACGGGGCGTCGACCTCGGCCCGACCGGAGGTGTGGAGCC GGCTGCTGGTCGACGCCTACGCCCACGACGGGCTCGACCCGCTCGCTCCCGACGTCCTGCGTGCGCTGCGCGAGCGCTGG TGGGCGCAGGTGAGCCGGCCGGGGCTGCCCTGGTTCGCGCGGGCGAAGCTGCAGTCGGGCGCAGACGCGTCTTTCCTCGG GCTTTCCGTCGACGTCGCGAACCAGAGTTGGACAGCGACGTGCGTCGGTGACTCGTGCGTGTTCCACCTACGCGACGGGG AGACGCGCTCGGTGGGCCCGGTCGGGCGGTCCAGCGACTTCACCCGGTTCGCGGAGCTGGTCGGCAGCCACGGCCCGTCC GCCCCGGAGCCGACCCTGCTGACCGGTGAGCTGCGGCCTGGCGACGTGCTCGTCCTCGCCACCGACGCGCTCGCCCGGCT CCTGCTGCACGCGGCCGAGACCCGCGGCCGGATGCCGTCGCCCGGCTGGCTCGCGCAGACCGCCGGCCGGTTCTCCCGAG CCGTCGCCGCCTACCGGCACCACGGGTACCTCGCCGACGACGACACGACGATCTGCGTGGTGCAAGCGTGA
Upstream 100 bases:
>100_bases ACGCCGACGTCACCGCGTTGATCGAGTTCCTCGACATCGGGACCCGCGCGGTCACGCCGACCGGCCTGCGTGACCTCACC GTCGGGCCGCGGTCGGCGGG
Downstream 100 bases:
>100_bases GCCTGCGCCGGCCCGAGGGCATGTGAATGAAGCTGCCAACCCTGCTCGACTACCAGCAGGCCGTCCAGATCCCGCGGCTG GCCTTCCTGGACGACCAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MTPLPATATSARPATASPAPSQPALSQPALSQPALSQPALSQPALSQPALSQPALSQPALSQPALSQPAPPPAPKPTPMP SGAAVALAATAHSVARLGRSPAENEDSCAIRPELGRFAVADGASTSARPEVWSRLLVDAYAHDGLDPLAPDVLRALRERW WAQVSRPGLPWFARAKLQSGADASFLGLSVDVANQSWTATCVGDSCVFHLRDGETRSVGPVGRSSDFTRFAELVGSHGPS APEPTLLTGELRPGDVLVLATDALARLLLHAAETRGRMPSPGWLAQTAGRFSRAVAAYRHHGYLADDDTTICVVQA
Sequences:
>Translated_316_residues MTPLPATATSARPATASPAPSQPALSQPALSQPALSQPALSQPALSQPALSQPALSQPALSQPALSQPAPPPAPKPTPMP SGAAVALAATAHSVARLGRSPAENEDSCAIRPELGRFAVADGASTSARPEVWSRLLVDAYAHDGLDPLAPDVLRALRERW WAQVSRPGLPWFARAKLQSGADASFLGLSVDVANQSWTATCVGDSCVFHLRDGETRSVGPVGRSSDFTRFAELVGSHGPS APEPTLLTGELRPGDVLVLATDALARLLLHAAETRGRMPSPGWLAQTAGRFSRAVAAYRHHGYLADDDTTICVVQA >Mature_315_residues TPLPATATSARPATASPAPSQPALSQPALSQPALSQPALSQPALSQPALSQPALSQPALSQPALSQPAPPPAPKPTPMPS GAAVALAATAHSVARLGRSPAENEDSCAIRPELGRFAVADGASTSARPEVWSRLLVDAYAHDGLDPLAPDVLRALRERWW AQVSRPGLPWFARAKLQSGADASFLGLSVDVANQSWTATCVGDSCVFHLRDGETRSVGPVGRSSDFTRFAELVGSHGPSA PEPTLLTGELRPGDVLVLATDALARLLLHAAETRGRMPSPGWLAQTAGRFSRAVAAYRHHGYLADDDTTICVVQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32889; Mature: 32758
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPLPATATSARPATASPAPSQPALSQPALSQPALSQPALSQPALSQPALSQPALSQPAL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SQPALSQPAPPPAPKPTPMPSGAAVALAATAHSVARLGRSPAENEDSCAIRPELGRFAVA CCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEE DGASTSARPEVWSRLLVDAYAHDGLDPLAPDVLRALRERWWAQVSRPGLPWFARAKLQSG CCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCC ADASFLGLSVDVANQSWTATCVGDSCVFHLRDGETRSVGPVGRSSDFTRFAELVGSHGPS CCCEEEEEEEEECCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCC APEPTLLTGELRPGDVLVLATDALARLLLHAAETRGRMPSPGWLAQTAGRFSRAVAAYRH CCCCCEEECCCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH HGYLADDDTTICVVQA CCEECCCCCEEEEEEC >Mature Secondary Structure TPLPATATSARPATASPAPSQPALSQPALSQPALSQPALSQPALSQPALSQPALSQPAL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SQPALSQPAPPPAPKPTPMPSGAAVALAATAHSVARLGRSPAENEDSCAIRPELGRFAVA CCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEE DGASTSARPEVWSRLLVDAYAHDGLDPLAPDVLRALRERWWAQVSRPGLPWFARAKLQSG CCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCC ADASFLGLSVDVANQSWTATCVGDSCVFHLRDGETRSVGPVGRSSDFTRFAELVGSHGPS CCCEEEEEEEEECCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCC APEPTLLTGELRPGDVLVLATDALARLLLHAAETRGRMPSPGWLAQTAGRFSRAVAAYRH CCCCCEEECCCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH HGYLADDDTTICVVQA CCEECCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA