| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is yeaC [H]
Identifier: 158316031
GI number: 158316031
Start: 5062703
End: 5063674
Strand: Reverse
Name: yeaC [H]
Synonym: Franean1_4249
Alternate gene names: 158316031
Gene position: 5063674-5062703 (Counterclockwise)
Preceding gene: 158316032
Following gene: 158316030
Centisome position: 56.38
GC content: 62.76
Gene sequence:
>972_bases ATGAGCAGTATGGAGACGCGGATTTCTGCCGAGATGTTCGCGGAGAATTTCAGTGCTGCGGCGGATAGTGTTGCGAGCGT GATCAAAGGTGACGGAACGGCGGTTCGACGTGGTCTGATATGTCTTTTCGCTGGCGGGCACCTGCTGGTGGAGGGGCCGC CTGGTCTGGGAAAGACCACCCTGGTGCGCTGCCTTTCCGCTGTGCTGGGCCTGCAGTTCCGGCGGGTCCAGTTCACGCCC GACCTTCTTCCGTCGGACATTACTGGCACTGAAGTCTTCCATCCTGACACCAGGAAAGTTGCTTTTAGCAAGGGTCCGGT GTTCACTCATCTTCTGCTGGCCGACGAGATTAATCGAGCATCACCGAAGACCCAGTCGGCGTTGCTTGAAGTGATGGCGG AACGCCAGGTCACGGTGAGCGGAGTCTCATGGCCGATCGATCCACCATTCCTCGTGCTCGCGACCCAGAATCCAGTGGAG ATGCGGGGGACCTATCCGTTGCCTGAGGCGCAGCTTGATCGCTTCTTGCTCCGGGTTAAGATCGAATATCCGGATCTTCC CGCGGAGATTGCCGTGTTGAGTAACCATCGAGCGGGTCTCGTACCGCAGGACTGCCGTGTGGTGCTGAACCGGACGGATG TGCTGCGGATGACAAGCTATGCCCGGTCTGTGCACGTCGACCACGAGGTCACCGAATACATCGCCAGAATCGTCCGGGCG ACCCGGTCGGCGGAGGGCGTCGTGCTGGGCGCGAGCCCGCGGGCCGGGACGGCCCTGCAGTCCGCCGCGCAGGTACTGGC GGCGGTGCAGGGCCGGGCATTCGTCACGCCGGCGGACGTCAAGGAACTGGCGGTTGACGCGCTGGCACACCGGGTGATCC TCGCACCGTCTGCTCGGTTCGACCAGACGAAGGCGGAAGACGTGATCAGCCGGATCGTGGGTTCGGTTCCAGCGCCCGGC TGGCGGCGGTGA
Upstream 100 bases:
>100_bases GGGATATGTGCCGACGAACTATATCAGCATTCCCGACACTGGGATGGAACCACGATACGCGGTGCGTCCCTGCTGACCCG TGGTCCGTTCGGAGGGCGTT
Downstream 100 bases:
>100_bases CCCCTGGCTCGAGCCGTCGGTCGGGCACCACGGGGTCGGTGATCGTCACATCCGTCGGTCGCCAGGCGGCTGGCGGCGTG GTCATCCTCGCGGGCGTCGC
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MSSMETRISAEMFAENFSAAADSVASVIKGDGTAVRRGLICLFAGGHLLVEGPPGLGKTTLVRCLSAVLGLQFRRVQFTP DLLPSDITGTEVFHPDTRKVAFSKGPVFTHLLLADEINRASPKTQSALLEVMAERQVTVSGVSWPIDPPFLVLATQNPVE MRGTYPLPEAQLDRFLLRVKIEYPDLPAEIAVLSNHRAGLVPQDCRVVLNRTDVLRMTSYARSVHVDHEVTEYIARIVRA TRSAEGVVLGASPRAGTALQSAAQVLAAVQGRAFVTPADVKELAVDALAHRVILAPSARFDQTKAEDVISRIVGSVPAPG WRR
Sequences:
>Translated_323_residues MSSMETRISAEMFAENFSAAADSVASVIKGDGTAVRRGLICLFAGGHLLVEGPPGLGKTTLVRCLSAVLGLQFRRVQFTP DLLPSDITGTEVFHPDTRKVAFSKGPVFTHLLLADEINRASPKTQSALLEVMAERQVTVSGVSWPIDPPFLVLATQNPVE MRGTYPLPEAQLDRFLLRVKIEYPDLPAEIAVLSNHRAGLVPQDCRVVLNRTDVLRMTSYARSVHVDHEVTEYIARIVRA TRSAEGVVLGASPRAGTALQSAAQVLAAVQGRAFVTPADVKELAVDALAHRVILAPSARFDQTKAEDVISRIVGSVPAPG WRR >Mature_322_residues SSMETRISAEMFAENFSAAADSVASVIKGDGTAVRRGLICLFAGGHLLVEGPPGLGKTTLVRCLSAVLGLQFRRVQFTPD LLPSDITGTEVFHPDTRKVAFSKGPVFTHLLLADEINRASPKTQSALLEVMAERQVTVSGVSWPIDPPFLVLATQNPVEM RGTYPLPEAQLDRFLLRVKIEYPDLPAEIAVLSNHRAGLVPQDCRVVLNRTDVLRMTSYARSVHVDHEVTEYIARIVRAT RSAEGVVLGASPRAGTALQSAAQVLAAVQGRAFVTPADVKELAVDALAHRVILAPSARFDQTKAEDVISRIVGSVPAPGW RR
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the moxR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011703 - InterPro: IPR016366 [H]
Pfam domain/function: PF07726 AAA_3 [H]
EC number: NA
Molecular weight: Translated: 34889; Mature: 34757
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSMETRISAEMFAENFSAAADSVASVIKGDGTAVRRGLICLFAGGHLLVEGPPGLGKTT CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCEEEEEECCEEEEECCCCCCHHH LVRCLSAVLGLQFRRVQFTPDLLPSDITGTEVFHPDTRKVAFSKGPVFTHLLLADEINRA HHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEECCCCCEEEECCCCHHHHHHHHHHHCCC SPKTQSALLEVMAERQVTVSGVSWPIDPPFLVLATQNPVEMRGTYPLPEAQLDRFLLRVK CCHHHHHHHHHHHHCCEEEECCCCCCCCCEEEEECCCCCEECCCCCCCHHHHHHEEEEEE IEYPDLPAEIAVLSNHRAGLVPQDCRVVLNRTDVLRMTSYARSVHVDHEVTEYIARIVRA EECCCCCHHEEEECCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH TRSAEGVVLGASPRAGTALQSAAQVLAAVQGRAFVTPADVKELAVDALAHRVILAPSARF HCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHEECCCCCC DQTKAEDVISRIVGSVPAPGWRR CCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SSMETRISAEMFAENFSAAADSVASVIKGDGTAVRRGLICLFAGGHLLVEGPPGLGKTT CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCEEEEEECCEEEEECCCCCCHHH LVRCLSAVLGLQFRRVQFTPDLLPSDITGTEVFHPDTRKVAFSKGPVFTHLLLADEINRA HHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEECCCCCEEEECCCCHHHHHHHHHHHCCC SPKTQSALLEVMAERQVTVSGVSWPIDPPFLVLATQNPVEMRGTYPLPEAQLDRFLLRVK CCHHHHHHHHHHHHCCEEEECCCCCCCCCEEEEECCCCCEECCCCCCCHHHHHHEEEEEE IEYPDLPAEIAVLSNHRAGLVPQDCRVVLNRTDVLRMTSYARSVHVDHEVTEYIARIVRA EECCCCCHHEEEECCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH TRSAEGVVLGASPRAGTALQSAAQVLAAVQGRAFVTPADVKELAVDALAHRVILAPSARF HCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHEECCCCCC DQTKAEDVISRIVGSVPAPGWRR CCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]