| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316029
Identifier: 158316029
GI number: 158316029
Start: 5059027
End: 5061438
Strand: Reverse
Name: 158316029
Synonym: Franean1_4247
Alternate gene names: NA
Gene position: 5061438-5059027 (Counterclockwise)
Preceding gene: 158316030
Following gene: 158316027
Centisome position: 56.35
GC content: 71.72
Gene sequence:
>2412_bases GTGACCTGGAGGGTAGCGGCCCTACGACGACTGGAGCGGCTCCGGACTCTGCGGATCGTCTCACGGGGGCGTCCACCGCG GGCACCGGAGTCCAACCAGCCCCGCTTGGCCACGCCCCTCGCCCTGGTGGCCCTGGGAGCCCTCGTCGCCGCCTCCGGAT TCCGCGGTGCCTTCGAGCTGACCGCGCGTGTCGCTGTGCCAGTCGGGCTTGCGGCTGTCCTGCCGCCGTTGATAGCCGCC GTCATGGCTGTGAGCACCCCGGCCCGGAAGGTTTGGCTGACGGCCGCGACGTCCACCGCCGCGTGGCTGGCCGTCCTCGT CCTGACCGTTTTCGGACCGTCCGGAGCATGGTTTCCGGCCGGTCTCGTACCCGATGCGCTGGCTCATGGGTTGGACCGGT TGTTACAGATCACACTGCCCGCACCGCCGCGAGCTGATCTGCTGGCGGTGGTGGTGACACTGATCTGGCTCGCCGCCGCG TCCGCGTCCATGCTCGTCGCCGCGGGCACCGGACGGGACACGCTGACCCCGGTGGCCCCGATCGCAATGCTTTTTGTCGC GGCGACCCTGATCAGCCTCCCCGGCCCTGGTTCACACGTCTCGACCGCGTCCGTCCTGGTCGCGGTGTTCGCGCTCATCG CAGCCGTCAGCCGACCGTCGGCCGGGCGGTGGGACCGGGCCGCCGGACCGGCACCGGTGGCGGGTGCGCCGCCGGCGGCC GGCGCGTCGCCTGCGCAGCGGCGGGCCCACGGAACTGGGCGGCGGCCGTCAACGAAGGCAGGAAGCCTGCGGCACCTGGT CGCGGTCCTCACCATCACCTGCGTTGCGGCTGGCTCGTTCGGTCTGGCCTCCCTGGTCACCTTGCTGGACCCCGATCCGT TCGACGTCCGCGAGTACCGGTCGCCGCCGGCGCGGACCGTCCAGCAGGTTGACCTACTGGCCCTCGTTTCAGCCTGGCAG GCCGAGCCCCGGACCCGGCTGTTCACGCTGGAGGCGACCGATGCGTTGATCGAGGGCGCTCCGCCGGACCGAATGCGTCT CGCCGTCCTGGACCGCTACGACGGCAGGAACTGGAGCAGCGCGTCCCGCTACATCCCGGCGGGCCTCGCTGTTCCAGCTC CGGAGGATGTGGATGGACCGGTAGCCAGACACACGCTGACAATCGATCGTCTGAGCGGCCCCTACCTGCCGGTCCTTGGT TGGCCGACCCGGCTCGACGCGTCCGGGCTGCGCGCCGGGCGGCGCACCAGCGCGCCGCTCGCGGTCGACCTCGAGAACGG TCTCCTTTCCGCGGACGCGCGCCTGGAGCCGGGCCGGACGGTGGAGATCACGTCGATACTCGGCGCCGCACCGACCCTGC GTGAGGCCGGCGAACGGCCGGTCGACCCGATTGCCGAACCCGTTCTCGCTCTGCCGGGTAACGTGGCGCCGCCGGGCGAC CTGACGGCGATCGCGCAGAAGGCATCGCGGTTGGCGGCCGTCCCAGGTAAACGAGCTTCGGTACTTGCGGATCTGCTGGC CCAGGGTCGGAAGCTTGATCGGACCGTGATCTCCGGCAGCTCACTCGGCGATGTCGAGGCGTTCCTCGGGGCGAGCCGCG TTGGTGGCGACGCGCTGTTCGCGACCGCGTTCGCACTGGCAGCCAACACCATCGGCCTCCCGACCCGGCTGGTGATCGGG TTCGACCGGCCCAGTTCGGCATCTGACGGTGCTGTCCACGCCGGTGACGTCCGTGTCTGGCCGGAGGTGCGGTTCGCCGA GGTCGGCTGGGTTCCGGTGGATCTCGGCTCGAGCTCGGCCACCGGTACCGGCGAGACGCCGCTACCGTCAGCCGGGACTC CTGATACAGGCGTGCATTCGTCCACGCCGTCCACGCTCAGTCCGCCCGCGAATGGTGTGCGGGTGGCTCCACCGCGTACC CCGCTTCCCCGGCCCGACCGCCCGGTGTGGGCCATGATTATAGCGGTGATTGTCGTCGTCCTCGGCCTTGCCGTTACCGG GGCGTGGTGGGCCACCAGGGCGGAACGACGGCGCCGACGCGCCCGTTCCGAGGCGTCGCCCCGCCGTCGTCTGATCGAGG CATGGTGGGACGCGGTCGAGACGATGGGTGGTCGGCGCCGTACGGTCCTGTCCTCCGACACCTGCGCCGAGGTCGTGCGC GAGGCTCGGGAGGTCTACGGCGAGCGTGCCGCCGAGCCGCTCGCCGAACTCGGCACGGACGCCGCGAGGGCGCTCTTTTC CGCGAGTGATCCGCGACCTGCGGAGGCGGACCGTGCGTGGGACCTGAACCAGCGCTTCCGTAAGCGCCTGCGGACCGAGC GCCGCCGTCGGCGCCGTGCCGCGGTGCGCGCAGCACCACGGCACCTCAGCCGGGCGCTGCGCAGGGCCGGCGCGCAGGCA CGTCGGCGATGA
Upstream 100 bases:
>100_bases GCCTGCTCATTCTCTCCGTCGGCGACACCGAAGAAGTCGTCCGGGCATGGCCGCGGCTGTTGGGCGCGCTGACCGGGCAG GCGCGGTGGGTTGGGTGAGC
Downstream 100 bases:
>100_bases GTCGGCGCCATTCGTCGGCGCTCAGCAGGTCACCGACCTCGGCGCACAGATCGTCAACCAGAGCATCCTGACTGACAGCC CACCACGAGACCGTGTCGTC
Product: transglutaminase domain-containing protein
Products: NA
Alternate protein names: Transglutaminase Domain Protein; Transglutaminase
Number of amino acids: Translated: 803; Mature: 802
Protein sequence:
>803_residues MTWRVAALRRLERLRTLRIVSRGRPPRAPESNQPRLATPLALVALGALVAASGFRGAFELTARVAVPVGLAAVLPPLIAA VMAVSTPARKVWLTAATSTAAWLAVLVLTVFGPSGAWFPAGLVPDALAHGLDRLLQITLPAPPRADLLAVVVTLIWLAAA SASMLVAAGTGRDTLTPVAPIAMLFVAATLISLPGPGSHVSTASVLVAVFALIAAVSRPSAGRWDRAAGPAPVAGAPPAA GASPAQRRAHGTGRRPSTKAGSLRHLVAVLTITCVAAGSFGLASLVTLLDPDPFDVREYRSPPARTVQQVDLLALVSAWQ AEPRTRLFTLEATDALIEGAPPDRMRLAVLDRYDGRNWSSASRYIPAGLAVPAPEDVDGPVARHTLTIDRLSGPYLPVLG WPTRLDASGLRAGRRTSAPLAVDLENGLLSADARLEPGRTVEITSILGAAPTLREAGERPVDPIAEPVLALPGNVAPPGD LTAIAQKASRLAAVPGKRASVLADLLAQGRKLDRTVISGSSLGDVEAFLGASRVGGDALFATAFALAANTIGLPTRLVIG FDRPSSASDGAVHAGDVRVWPEVRFAEVGWVPVDLGSSSATGTGETPLPSAGTPDTGVHSSTPSTLSPPANGVRVAPPRT PLPRPDRPVWAMIIAVIVVVLGLAVTGAWWATRAERRRRRARSEASPRRRLIEAWWDAVETMGGRRRTVLSSDTCAEVVR EAREVYGERAAEPLAELGTDAARALFSASDPRPAEADRAWDLNQRFRKRLRTERRRRRRAAVRAAPRHLSRALRRAGAQA RRR
Sequences:
>Translated_803_residues MTWRVAALRRLERLRTLRIVSRGRPPRAPESNQPRLATPLALVALGALVAASGFRGAFELTARVAVPVGLAAVLPPLIAA VMAVSTPARKVWLTAATSTAAWLAVLVLTVFGPSGAWFPAGLVPDALAHGLDRLLQITLPAPPRADLLAVVVTLIWLAAA SASMLVAAGTGRDTLTPVAPIAMLFVAATLISLPGPGSHVSTASVLVAVFALIAAVSRPSAGRWDRAAGPAPVAGAPPAA GASPAQRRAHGTGRRPSTKAGSLRHLVAVLTITCVAAGSFGLASLVTLLDPDPFDVREYRSPPARTVQQVDLLALVSAWQ AEPRTRLFTLEATDALIEGAPPDRMRLAVLDRYDGRNWSSASRYIPAGLAVPAPEDVDGPVARHTLTIDRLSGPYLPVLG WPTRLDASGLRAGRRTSAPLAVDLENGLLSADARLEPGRTVEITSILGAAPTLREAGERPVDPIAEPVLALPGNVAPPGD LTAIAQKASRLAAVPGKRASVLADLLAQGRKLDRTVISGSSLGDVEAFLGASRVGGDALFATAFALAANTIGLPTRLVIG FDRPSSASDGAVHAGDVRVWPEVRFAEVGWVPVDLGSSSATGTGETPLPSAGTPDTGVHSSTPSTLSPPANGVRVAPPRT PLPRPDRPVWAMIIAVIVVVLGLAVTGAWWATRAERRRRRARSEASPRRRLIEAWWDAVETMGGRRRTVLSSDTCAEVVR EAREVYGERAAEPLAELGTDAARALFSASDPRPAEADRAWDLNQRFRKRLRTERRRRRRAAVRAAPRHLSRALRRAGAQA RRR >Mature_802_residues TWRVAALRRLERLRTLRIVSRGRPPRAPESNQPRLATPLALVALGALVAASGFRGAFELTARVAVPVGLAAVLPPLIAAV MAVSTPARKVWLTAATSTAAWLAVLVLTVFGPSGAWFPAGLVPDALAHGLDRLLQITLPAPPRADLLAVVVTLIWLAAAS ASMLVAAGTGRDTLTPVAPIAMLFVAATLISLPGPGSHVSTASVLVAVFALIAAVSRPSAGRWDRAAGPAPVAGAPPAAG ASPAQRRAHGTGRRPSTKAGSLRHLVAVLTITCVAAGSFGLASLVTLLDPDPFDVREYRSPPARTVQQVDLLALVSAWQA EPRTRLFTLEATDALIEGAPPDRMRLAVLDRYDGRNWSSASRYIPAGLAVPAPEDVDGPVARHTLTIDRLSGPYLPVLGW PTRLDASGLRAGRRTSAPLAVDLENGLLSADARLEPGRTVEITSILGAAPTLREAGERPVDPIAEPVLALPGNVAPPGDL TAIAQKASRLAAVPGKRASVLADLLAQGRKLDRTVISGSSLGDVEAFLGASRVGGDALFATAFALAANTIGLPTRLVIGF DRPSSASDGAVHAGDVRVWPEVRFAEVGWVPVDLGSSSATGTGETPLPSAGTPDTGVHSSTPSTLSPPANGVRVAPPRTP LPRPDRPVWAMIIAVIVVVLGLAVTGAWWATRAERRRRRARSEASPRRRLIEAWWDAVETMGGRRRTVLSSDTCAEVVRE AREVYGERAAEPLAELGTDAARALFSASDPRPAEADRAWDLNQRFRKRLRTERRRRRRAAVRAAPRHLSRALRRAGAQAR RR
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84575; Mature: 84444
Theoretical pI: Translated: 11.92; Mature: 11.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWRVAALRRLERLRTLRIVSRGRPPRAPESNQPRLATPLALVALGALVAASGFRGAFEL CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH TARVAVPVGLAAVLPPLIAAVMAVSTPARKVWLTAATSTAAWLAVLVLTVFGPSGAWFPA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCC GLVPDALAHGLDRLLQITLPAPPRADLLAVVVTLIWLAAASASMLVAAGTGRDTLTPVAP CCCHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHH IAMLFVAATLISLPGPGSHVSTASVLVAVFALIAAVSRPSAGRWDRAAGPAPVAGAPPAA HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC GASPAQRRAHGTGRRPSTKAGSLRHLVAVLTITCVAAGSFGLASLVTLLDPDPFDVREYR CCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHC SPPARTVQQVDLLALVSAWQAEPRTRLFTLEATDALIEGAPPDRMRLAVLDRYDGRNWSS CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHCCCCCCCEEEEEEECCCCCCCCC ASRYIPAGLAVPAPEDVDGPVARHTLTIDRLSGPYLPVLGWPTRLDASGLRAGRRTSAPL CCCCCCCCCCCCCCCCCCCCHHHHEEEEECCCCCCEEEECCCCCCCHHHHCCCCCCCCCE AVDLENGLLSADARLEPGRTVEITSILGAAPTLREAGERPVDPIAEPVLALPGNVAPPGD EEECCCCEECCCCCCCCCCEEEHHHHHCCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCCH LTAIAQKASRLAAVPGKRASVLADLLAQGRKLDRTVISGSSLGDVEAFLGASRVGGDALF HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHCCCHHHH ATAFALAANTIGLPTRLVIGFDRPSSASDGAVHAGDVRVWPEVRFAEVGWVPVDLGSSSA HHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEECCCEEECCCCEEEEECEEEEECCCCCC TGTGETPLPSAGTPDTGVHSSTPSTLSPPANGVRVAPPRTPLPRPDRPVWAMIIAVIVVV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHH LGLAVTGAWWATRAERRRRRARSEASPRRRLIEAWWDAVETMGGRRRTVLSSDTCAEVVR HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHH EAREVYGERAAEPLAELGTDAARALFSASDPRPAEADRAWDLNQRFRKRLRTERRRRRRA HHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH AVRAAPRHLSRALRRAGAQARRR HHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TWRVAALRRLERLRTLRIVSRGRPPRAPESNQPRLATPLALVALGALVAASGFRGAFEL CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH TARVAVPVGLAAVLPPLIAAVMAVSTPARKVWLTAATSTAAWLAVLVLTVFGPSGAWFPA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCC GLVPDALAHGLDRLLQITLPAPPRADLLAVVVTLIWLAAASASMLVAAGTGRDTLTPVAP CCCHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHH IAMLFVAATLISLPGPGSHVSTASVLVAVFALIAAVSRPSAGRWDRAAGPAPVAGAPPAA HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC GASPAQRRAHGTGRRPSTKAGSLRHLVAVLTITCVAAGSFGLASLVTLLDPDPFDVREYR CCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHC SPPARTVQQVDLLALVSAWQAEPRTRLFTLEATDALIEGAPPDRMRLAVLDRYDGRNWSS CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHCCCCCCCEEEEEEECCCCCCCCC ASRYIPAGLAVPAPEDVDGPVARHTLTIDRLSGPYLPVLGWPTRLDASGLRAGRRTSAPL CCCCCCCCCCCCCCCCCCCCHHHHEEEEECCCCCCEEEECCCCCCCHHHHCCCCCCCCCE AVDLENGLLSADARLEPGRTVEITSILGAAPTLREAGERPVDPIAEPVLALPGNVAPPGD EEECCCCEECCCCCCCCCCEEEHHHHHCCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCCH LTAIAQKASRLAAVPGKRASVLADLLAQGRKLDRTVISGSSLGDVEAFLGASRVGGDALF HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHCCCHHHH ATAFALAANTIGLPTRLVIGFDRPSSASDGAVHAGDVRVWPEVRFAEVGWVPVDLGSSSA HHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEECCCEEECCCCEEEEECEEEEECCCCCC TGTGETPLPSAGTPDTGVHSSTPSTLSPPANGVRVAPPRTPLPRPDRPVWAMIIAVIVVV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHH LGLAVTGAWWATRAERRRRRARSEASPRRRLIEAWWDAVETMGGRRRTVLSSDTCAEVVR HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHH EAREVYGERAAEPLAELGTDAARALFSASDPRPAEADRAWDLNQRFRKRLRTERRRRRRA HHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH AVRAAPRHLSRALRRAGAQARRR HHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA