| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315913
Identifier: 158315913
GI number: 158315913
Start: 4911339
End: 4912031
Strand: Reverse
Name: 158315913
Synonym: Franean1_4128
Alternate gene names: NA
Gene position: 4912031-4911339 (Counterclockwise)
Preceding gene: 158315914
Following gene: 158315912
Centisome position: 54.69
GC content: 71.0
Gene sequence:
>693_bases ATGATCACCGATCCTGTTTCGGTACCGTCCCGTGACCACGTCGTGGACGCGCTCATCAGCCTGCTGGCAGGCACATGCCC GGACCGGGTGCTACGCGTTGCGATCGACGGCCCGGACGCCGCCGGCAAGACGACCCTGGCGGACGAGCTCGCCGGCACGC TCGCTGACCGGGGCCGGCCCGTCATCCGCGCCAGCGTCGACGGCTTCCACCAGCCCCAGGCTGTACGCCGCCGCCGCGGG TCGCTGTCCCCGGAGGGTTACTTCCTCGACGCGTTCGACTACCCCGCTCTACGGCGTCTCCTGATCGACCCGCTCAGCCC AGACGGCGACCGGCGCTACCGCACGGCGGCGTTCGACCATCGCAGCGACTCCCCGCTCGACAGCCCCACCCGCGAGGCGG CTGGCAACGCGGTGCTCATCGTCGACGGCGTCTTCCTCCTCCGCCACGAACTACGCGGCTGTTGGGACCTCGCCGTGTTT CTCCAGATCAGCCCCGCCGAATCGCTGCGCCGCGCGCTGCGCCGCGACGTTGCCCTGTTCGGCTCACCCGACGCGGTCCG CGAACGCTACAAGGCGCGCTACCTGCCCGGCCAAGAGCTCTACCAGGCCTCCGTCGCGCCCCGGGACCACGCCGACGTGC TGATCGACCACGAACGTCCAGAAACTCCCCGCGTTCTGCGCTGGCCCGCGTGA
Upstream 100 bases:
>100_bases CGCCCACCGGCACCGCGCCGACGCCGGCGAAACCTGGACCCACTACGCCCCGGGCGAGCACAGTCGATGACCAGGAACTT CCTCGCTACTGTCACATCAC
Downstream 100 bases:
>100_bases CGAGGCCCCTGATCCGCTCCGCCAGATTCGCCCGGGTGTACCGGCAGTTCACACTGCGCCCAGCCAGGTTGACCACCGCG TCGGCGCCATCCACCTCGGC
Product: uridine kinase
Products: ADP; UMP
Alternate protein names: Phosphoribulokinase / Uridine Kinase Family; Kinase; Phosphoribulokinase/Uridine Kinase; Pantothenate Kinase Protein
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MITDPVSVPSRDHVVDALISLLAGTCPDRVLRVAIDGPDAAGKTTLADELAGTLADRGRPVIRASVDGFHQPQAVRRRRG SLSPEGYFLDAFDYPALRRLLIDPLSPDGDRRYRTAAFDHRSDSPLDSPTREAAGNAVLIVDGVFLLRHELRGCWDLAVF LQISPAESLRRALRRDVALFGSPDAVRERYKARYLPGQELYQASVAPRDHADVLIDHERPETPRVLRWPA
Sequences:
>Translated_230_residues MITDPVSVPSRDHVVDALISLLAGTCPDRVLRVAIDGPDAAGKTTLADELAGTLADRGRPVIRASVDGFHQPQAVRRRRG SLSPEGYFLDAFDYPALRRLLIDPLSPDGDRRYRTAAFDHRSDSPLDSPTREAAGNAVLIVDGVFLLRHELRGCWDLAVF LQISPAESLRRALRRDVALFGSPDAVRERYKARYLPGQELYQASVAPRDHADVLIDHERPETPRVLRWPA >Mature_230_residues MITDPVSVPSRDHVVDALISLLAGTCPDRVLRVAIDGPDAAGKTTLADELAGTLADRGRPVIRASVDGFHQPQAVRRRRG SLSPEGYFLDAFDYPALRRLLIDPLSPDGDRRYRTAAFDHRSDSPLDSPTREAAGNAVLIVDGVFLLRHELRGCWDLAVF LQISPAESLRRALRRDVALFGSPDAVRERYKARYLPGQELYQASVAPRDHADVLIDHERPETPRVLRWPA
Specific function: Unknown
COG id: COG0572
COG function: function code F; Uridine kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.1.48
Molecular weight: Translated: 25517; Mature: 25517
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITDPVSVPSRDHVVDALISLLAGTCPDRVLRVAIDGPDAAGKTTLADELAGTLADRGRP CCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCC VIRASVDGFHQPQAVRRRRGSLSPEGYFLDAFDYPALRRLLIDPLSPDGDRRYRTAAFDH EEEECCCCCCCCHHHHHHCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCCCCEEHHHCCC RSDSPLDSPTREAAGNAVLIVDGVFLLRHELRGCWDLAVFLQISPAESLRRALRRDVALF CCCCCCCCCHHHHCCCEEEEEHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHHC GSPDAVRERYKARYLPGQELYQASVAPRDHADVLIDHERPETPRVLRWPA CCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCEEECCC >Mature Secondary Structure MITDPVSVPSRDHVVDALISLLAGTCPDRVLRVAIDGPDAAGKTTLADELAGTLADRGRP CCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCC VIRASVDGFHQPQAVRRRRGSLSPEGYFLDAFDYPALRRLLIDPLSPDGDRRYRTAAFDH EEEECCCCCCCCHHHHHHCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCCCCEEHHHCCC RSDSPLDSPTREAAGNAVLIVDGVFLLRHELRGCWDLAVFLQISPAESLRRALRRDVALF CCCCCCCCCHHHHCCCEEEEEHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHHC GSPDAVRERYKARYLPGQELYQASVAPRDHADVLIDHERPETPRVLRWPA CCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; uridine
Specific reaction: ATP + uridine = ADP + UMP
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA