| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315912
Identifier: 158315912
GI number: 158315912
Start: 4910906
End: 4911220
Strand: Reverse
Name: 158315912
Synonym: Franean1_4127
Alternate gene names: NA
Gene position: 4911220-4910906 (Counterclockwise)
Preceding gene: 158315913
Following gene: 158315910
Centisome position: 54.68
GC content: 69.21
Gene sequence:
>315_bases TTGGCCGTCCCAGCGCACCGTCCGCGCGCCGGGCACCTGAATATCGGCGCGCCGGCTGAGGACAACCACCTCATGCCCAG CACTCCCGAATGCGCCTGCGAGCAGCGACCCCAGATGCCCCGTCCCACCCGGAACAACAATCTTCACGATCTCCACGCTC CCGCTCGACCGGCACGCGACCACACCACAGCCAGTCTTACGCGCACCCCGATCCCGATGCGCCGCAGAGAAACCATCCCG TCACCGGGGTTCACGCCGCCGAGCGTGCCCGAGCAACAGCCGATCAGGCCTGCCGCGCCTCGGCGAGGCGCATGA
Upstream 100 bases:
>100_bases CCGCCAGATTCGCCCGGGTGTACCGGCAGTTCACACTGCGCCCAGCCAGGTTGACCACCGCGTCGGCGCCATCCACCTCG GCCACCCACGCGCCCTCGGT
Downstream 100 bases:
>100_bases CCAGGTCAATTCCCTTCCGGATGACGACGGAGACTGAGATTCGCAAAATCACAGATGATCATCTCGTGAGAGGATGCGGC AGGCTGACCGGCAACCACGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MAVPAHRPRAGHLNIGAPAEDNHLMPSTPECACEQRPQMPRPTRNNNLHDLHAPARPARDHTTASLTRTPIPMRRRETIP SPGFTPPSVPEQQPIRPAAPRRGA
Sequences:
>Translated_104_residues MAVPAHRPRAGHLNIGAPAEDNHLMPSTPECACEQRPQMPRPTRNNNLHDLHAPARPARDHTTASLTRTPIPMRRRETIP SPGFTPPSVPEQQPIRPAAPRRGA >Mature_103_residues AVPAHRPRAGHLNIGAPAEDNHLMPSTPECACEQRPQMPRPTRNNNLHDLHAPARPARDHTTASLTRTPIPMRRRETIPS PGFTPPSVPEQQPIRPAAPRRGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11448; Mature: 11317
Theoretical pI: Translated: 11.94; Mature: 11.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVPAHRPRAGHLNIGAPAEDNHLMPSTPECACEQRPQMPRPTRNNNLHDLHAPARPARD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEECCCCCCCCCC HTTASLTRTPIPMRRRETIPSPGFTPPSVPEQQPIRPAAPRRGA CCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AVPAHRPRAGHLNIGAPAEDNHLMPSTPECACEQRPQMPRPTRNNNLHDLHAPARPARD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEECCCCCCCCCC HTTASLTRTPIPMRRRETIPSPGFTPPSVPEQQPIRPAAPRRGA CCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA