| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is yusP [H]
Identifier: 158315908
GI number: 158315908
Start: 4905158
End: 4906624
Strand: Reverse
Name: yusP [H]
Synonym: Franean1_4123
Alternate gene names: 158315908
Gene position: 4906624-4905158 (Counterclockwise)
Preceding gene: 158315910
Following gene: 158315907
Centisome position: 54.63
GC content: 69.87
Gene sequence:
>1467_bases ATGATCCAACCTGCCCGCAGAGCCCACCACCAGGTCACGTTTGCCGTACTGGCGCTCGCCGTGGCCACCTACGCCCTGCT GCAGTCACTGGTCACCCCCGTGCTACCCACGATCATGGAAAGCCTGCACACCAACCAGACCACGGTCACCTGGGTGCTGA CCGCCTACCTCCTCTCCGCCTCGATCTTCACCCCGATCATGGGCCGCATCGGCGACGCCGTCGGCAAGAAGAAAATGCTG CTGGTCGCCCTCGGCGCACTCGCCGCGGGCTCCGCCCTGGCCGCGATCGCCACCGGCATCACCCTGATGATCATCGCCCG CGTCATCCAGGGTGTGGGCGGCGGCATCCTCCCGCTCGCCTTCGGCATCATCCGCGACGAGTTCCCCCTGCCGAAGGTCT CCAGCGCCATCGGCGTCCTGGCCGCGCTGACCGCGGTCGGCGCCGGCCTCGGCCTCGTCCTGGCCGGCCCGATCGTCGAC CTGCTCGACTACCACTGGCTGTTCTGGGTTCCCCTGATCATGGTGCTGCTGGCCGCCGCGGCCGCCGTCGTGTTCATCCC GGAATCCGCCATCCGCACCCCCTCCAGGATCAGCATCACCCCGGCACTGCTGCTCTCCGCCTGGCTGGTCTGCCTGCTGC TCGGCCTCTCCGAAGGCCCCGACTGGGGCTGGACGTCCGGCAAGGTGCTCGGCCTGCTCGCCGGCGCCGTCATCATCGGC GGAGCGTGGGTCGTCGTCGAGACCCGCTCCACCGCCCCACTGATCGACATGACCATGATGCGCCTGCCGGCCGTCTGGAC CACCAACCTCGTCGCCCTGCTCATCGGCGTCGGCATGTACGCCCTCATGGCGTTCCTGCCGCAGTTCGTACAGACCCCGA CCTCCGCCGGATACGGCTTCGGCGCCACCATCACCGAATCCGGGCTGATCCTGCTGCCGCTGAGCATCACGATGTTCGCC GTCGGGATCGCTTCCGGCCCGCTGGCCGCCCGCTACGGATCCAAGGCCGTCGTCGTCACCGGCTCCGCGGTCACAATCAT CTCCTTCGTCCTGACCGCCTTCGCCCACCACGACAAGTGGGAGGTCTACATCGCCACCGCGGTGATGGGCATCGGGCTCG GCCTGGCCTTCTCCGCCATGGCCAGCCTCATCGTCGAGGCCGTCCCGGCCCACCAGACCGGCGTCGCCTCCGGCATGAAC GCCAACATCCGCACCATCGGCGGCTCGATCGGCGCCGCACTGATGGCCACCATCGTCACCTCCGGCGCCGGAGGTGACGG CATACCCAAGGAATCCGGCTACACCAACGGCTTCGCCATGCTCGCCGGCGCCACCGTGCTCGCCCTGATCGCCGCCCTCG CCATCCCGGCCGCCCGCCGGGGCCACCCGGCGACCGCCCAGGACCTGCCACACGCCGAGCTGGGGCTGGTGCCCGGCGGC ACCCTGCTCGGCGCCGACCCGGAGTAG
Upstream 100 bases:
>100_bases CCGTCGCCGGAGGAAGGCCCGGGCCTCGATGGGAACGGAGGATCGACTCCTGTTACGCTCCTTGCGGAGCGGAGGCTCCG TTCCGTACCCTGGAGGGTCC
Downstream 100 bases:
>100_bases ACCGCACCGGCCAGGGCATACCAGCTAGGGCCCTACCAGCCGGGACAATCAGGCCAGTCACCCCGTCAGGCCGACCACGG TCCGTCGGCGCCCACGGCTA
Product: major facilitator transporter
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 488; Mature: 488
Protein sequence:
>488_residues MIQPARRAHHQVTFAVLALAVATYALLQSLVTPVLPTIMESLHTNQTTVTWVLTAYLLSASIFTPIMGRIGDAVGKKKML LVALGALAAGSALAAIATGITLMIIARVIQGVGGGILPLAFGIIRDEFPLPKVSSAIGVLAALTAVGAGLGLVLAGPIVD LLDYHWLFWVPLIMVLLAAAAAVVFIPESAIRTPSRISITPALLLSAWLVCLLLGLSEGPDWGWTSGKVLGLLAGAVIIG GAWVVVETRSTAPLIDMTMMRLPAVWTTNLVALLIGVGMYALMAFLPQFVQTPTSAGYGFGATITESGLILLPLSITMFA VGIASGPLAARYGSKAVVVTGSAVTIISFVLTAFAHHDKWEVYIATAVMGIGLGLAFSAMASLIVEAVPAHQTGVASGMN ANIRTIGGSIGAALMATIVTSGAGGDGIPKESGYTNGFAMLAGATVLALIAALAIPAARRGHPATAQDLPHAELGLVPGG TLLGADPE
Sequences:
>Translated_488_residues MIQPARRAHHQVTFAVLALAVATYALLQSLVTPVLPTIMESLHTNQTTVTWVLTAYLLSASIFTPIMGRIGDAVGKKKML LVALGALAAGSALAAIATGITLMIIARVIQGVGGGILPLAFGIIRDEFPLPKVSSAIGVLAALTAVGAGLGLVLAGPIVD LLDYHWLFWVPLIMVLLAAAAAVVFIPESAIRTPSRISITPALLLSAWLVCLLLGLSEGPDWGWTSGKVLGLLAGAVIIG GAWVVVETRSTAPLIDMTMMRLPAVWTTNLVALLIGVGMYALMAFLPQFVQTPTSAGYGFGATITESGLILLPLSITMFA VGIASGPLAARYGSKAVVVTGSAVTIISFVLTAFAHHDKWEVYIATAVMGIGLGLAFSAMASLIVEAVPAHQTGVASGMN ANIRTIGGSIGAALMATIVTSGAGGDGIPKESGYTNGFAMLAGATVLALIAALAIPAARRGHPATAQDLPHAELGLVPGG TLLGADPE >Mature_488_residues MIQPARRAHHQVTFAVLALAVATYALLQSLVTPVLPTIMESLHTNQTTVTWVLTAYLLSASIFTPIMGRIGDAVGKKKML LVALGALAAGSALAAIATGITLMIIARVIQGVGGGILPLAFGIIRDEFPLPKVSSAIGVLAALTAVGAGLGLVLAGPIVD LLDYHWLFWVPLIMVLLAAAAAVVFIPESAIRTPSRISITPALLLSAWLVCLLLGLSEGPDWGWTSGKVLGLLAGAVIIG GAWVVVETRSTAPLIDMTMMRLPAVWTTNLVALLIGVGMYALMAFLPQFVQTPTSAGYGFGATITESGLILLPLSITMFA VGIASGPLAARYGSKAVVVTGSAVTIISFVLTAFAHHDKWEVYIATAVMGIGLGLAFSAMASLIVEAVPAHQTGVASGMN ANIRTIGGSIGAALMATIVTSGAGGDGIPKESGYTNGFAMLAGATVLALIAALAIPAARRGHPATAQDLPHAELGLVPGG TLLGADPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI1788710, Length=419, Percent_Identity=22.673031026253, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI87081983, Length=398, Percent_Identity=25.6281407035176, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1789042, Length=436, Percent_Identity=23.6238532110092, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1790195, Length=422, Percent_Identity=21.8009478672986, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1788392, Length=452, Percent_Identity=23.0088495575221, Blast_Score=63, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6322958, Length=338, Percent_Identity=27.5147928994083, Blast_Score=81, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6324954, Length=425, Percent_Identity=22.5882352941176, Blast_Score=75, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 49792; Mature: 49792
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQPARRAHHQVTFAVLALAVATYALLQSLVTPVLPTIMESLHTNQTTVTWVLTAYLLSA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH SIFTPIMGRIGDAVGKKKMLLVALGALAAGSALAAIATGITLMIIARVIQGVGGGILPLA HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH FGIIRDEFPLPKVSSAIGVLAALTAVGAGLGLVLAGPIVDLLDYHWLFWVPLIMVLLAAA HHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAVVFIPESAIRTPSRISITPALLLSAWLVCLLLGLSEGPDWGWTSGKVLGLLAGAVIIG HHHHCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC GAWVVVETRSTAPLIDMTMMRLPAVWTTNLVALLIGVGMYALMAFLPQFVQTPTSAGYGF CEEEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GATITESGLILLPLSITMFAVGIASGPLAARYGSKAVVVTGSAVTIISFVLTAFAHHDKW CCEECCCCEEEEHHHHHHHHHHHCCCCHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCH EVYIATAVMGIGLGLAFSAMASLIVEAVPAHQTGVASGMNANIRTIGGSIGAALMATIVT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCEECCHHHHHHHHHHHHH SGAGGDGIPKESGYTNGFAMLAGATVLALIAALAIPAARRGHPATAQDLPHAELGLVPGG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHCCCCCCCCCCCCC TLLGADPE CCCCCCCC >Mature Secondary Structure MIQPARRAHHQVTFAVLALAVATYALLQSLVTPVLPTIMESLHTNQTTVTWVLTAYLLSA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH SIFTPIMGRIGDAVGKKKMLLVALGALAAGSALAAIATGITLMIIARVIQGVGGGILPLA HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH FGIIRDEFPLPKVSSAIGVLAALTAVGAGLGLVLAGPIVDLLDYHWLFWVPLIMVLLAAA HHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAVVFIPESAIRTPSRISITPALLLSAWLVCLLLGLSEGPDWGWTSGKVLGLLAGAVIIG HHHHCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC GAWVVVETRSTAPLIDMTMMRLPAVWTTNLVALLIGVGMYALMAFLPQFVQTPTSAGYGF CEEEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GATITESGLILLPLSITMFAVGIASGPLAARYGSKAVVVTGSAVTIISFVLTAFAHHDKW CCEECCCCEEEEHHHHHHHHHHHCCCCHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCH EVYIATAVMGIGLGLAFSAMASLIVEAVPAHQTGVASGMNANIRTIGGSIGAALMATIVT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCEECCHHHHHHHHHHHHH SGAGGDGIPKESGYTNGFAMLAGATVLALIAALAIPAARRGHPATAQDLPHAELGLVPGG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHCCCCCCCCCCCCC TLLGADPE CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]