| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315910
Identifier: 158315910
GI number: 158315910
Start: 4907884
End: 4909194
Strand: Reverse
Name: 158315910
Synonym: Franean1_4125
Alternate gene names: NA
Gene position: 4909194-4907884 (Counterclockwise)
Preceding gene: 158315912
Following gene: 158315908
Centisome position: 54.66
GC content: 79.33
Gene sequence:
>1311_bases ATGAGCTCGGCCGACGATCCCAGGGCGACACCGGCAGACGACGATCCCACCACCATGACGGGTGGTGCCCAGACGGCGGC ACCACCGTCGTCGCGGTGCGTCTTCCCTGGCTGCGAGCGGCCCACCGCACCCGCCGACCGGCCTGGACGGCCACCGTCCT ACTGCGAGGATCCGGCCCACAACCGGCTCGCGGCCTACCGCCGTCGCCGCGACCTCGCCCGCCGGGAGAGCACCCCGCCC GCCGGCGGTGACCCGGCGGCCGTGCGTCCGCCGGTCGCGCGGCCGATCGCCGCCGGGCGGCTGCGGGCCGACGAGCTCGC CGCCCAGATCCGCGCGCTGGCCGCCGACCTGACCCGTTCCCTGGACGGATTCTCCCGGGAGATGGCCGGCCTCGGGGATG TCGCCCGCGCCGAGGCGCAGGTGGAGGCGGCCGAGGCCGATGCCGCCGAGCGGGTCGCCGAGGCGGTGGCCCGGGCCGTG CGCGCGGAGCAGGCCTCTCGGGCGGAGCAGACCGCCCGCGGGGAGGCCGAGGCGGTGGCCGCCGAAGCCGTCGCCGCCCT CGAGGATGCCGAACGGCGACTGGCCACCGCCGAGGCGGCGCACGCGGGCGCGGTCACCGATGCCGAGACGGCCCGCCGGG AGGCCGCCGCGGCGGTGGAGGCGGCGCGCGCTGACGCCGACGCCCGCGTCGAGCAGGCGCAGGCCCGGGCCGACGACGAT GTGGCGCGTGCCCGGCGGGAGGCGGCCACCGAGATCGGTCGGGTCCACGCCGAGGCAGAACGGGTCCGCGCCGAGCTGAC CGCTGAGACGGACCGGCTGACCGTGGCGTTGCGGGCCGCGGAACGGGCCGCCGAGCGGGACGCGGCGGCCCTGCGTGAAC TGCGAGCGGACCGCGACCATCTGCGGGCCGACCGGGACCGGATCCGTGACGACGCCCGCCGCGAACGCGACGAGCTGGCC CGGGCGCACGCCGACGCCCAGACCGAGACCGCCCGGGTCCGCGCGGCCGCCGCCGAGGATCTCGAGCGGGAACGGGCGGC CGCCACCGACCAGCTGGAGCGGGCCCGCACCGAAGCGGCGTCCCGGCTGGCGGCCGAGCAGCAGGCCGCCGCTGAGCGGC TCGCCGTGCTCACCGACGCCCGCGCCGAGGCCCGGACCCGCGCCGAACGCGCCGAACGGCAGGTCGACGAGCTCACCGCC GAGCTACGCACCGCCCGCGCCCAGCCCCCGTCCCAGCCCCAGCCCTCACCGGCCGGTGGACGTCCGGCCGGCGAGGTGCC GGTGCCACCGGGTCGCCCGGCGGTCGAGTGA
Upstream 100 bases:
>100_bases CACGCGGTGGGCGGCCGCACCGGGCGAAACACGCGAATGACCTGGTCGCCACGCGGGTCGCGCACGATCCGCTTCGGGGT TCGTCCGGTAGAACCGGAGC
Downstream 100 bases:
>100_bases GCCTGCCGGCCCCGCGATGAGCCGGGAACCGGGGTGGGATCAGGCTGCGGGACGCAGAGTGCGGGCGAACAGCGCCAGCG ACTTCTCCCAGTGCCGCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MSSADDPRATPADDDPTTMTGGAQTAAPPSSRCVFPGCERPTAPADRPGRPPSYCEDPAHNRLAAYRRRRDLARRESTPP AGGDPAAVRPPVARPIAAGRLRADELAAQIRALAADLTRSLDGFSREMAGLGDVARAEAQVEAAEADAAERVAEAVARAV RAEQASRAEQTARGEAEAVAAEAVAALEDAERRLATAEAAHAGAVTDAETARREAAAAVEAARADADARVEQAQARADDD VARARREAATEIGRVHAEAERVRAELTAETDRLTVALRAAERAAERDAAALRELRADRDHLRADRDRIRDDARRERDELA RAHADAQTETARVRAAAAEDLERERAAATDQLERARTEAASRLAAEQQAAAERLAVLTDARAEARTRAERAERQVDELTA ELRTARAQPPSQPQPSPAGGRPAGEVPVPPGRPAVE
Sequences:
>Translated_436_residues MSSADDPRATPADDDPTTMTGGAQTAAPPSSRCVFPGCERPTAPADRPGRPPSYCEDPAHNRLAAYRRRRDLARRESTPP AGGDPAAVRPPVARPIAAGRLRADELAAQIRALAADLTRSLDGFSREMAGLGDVARAEAQVEAAEADAAERVAEAVARAV RAEQASRAEQTARGEAEAVAAEAVAALEDAERRLATAEAAHAGAVTDAETARREAAAAVEAARADADARVEQAQARADDD VARARREAATEIGRVHAEAERVRAELTAETDRLTVALRAAERAAERDAAALRELRADRDHLRADRDRIRDDARRERDELA RAHADAQTETARVRAAAAEDLERERAAATDQLERARTEAASRLAAEQQAAAERLAVLTDARAEARTRAERAERQVDELTA ELRTARAQPPSQPQPSPAGGRPAGEVPVPPGRPAVE >Mature_435_residues SSADDPRATPADDDPTTMTGGAQTAAPPSSRCVFPGCERPTAPADRPGRPPSYCEDPAHNRLAAYRRRRDLARRESTPPA GGDPAAVRPPVARPIAAGRLRADELAAQIRALAADLTRSLDGFSREMAGLGDVARAEAQVEAAEADAAERVAEAVARAVR AEQASRAEQTARGEAEAVAAEAVAALEDAERRLATAEAAHAGAVTDAETARREAAAAVEAARADADARVEQAQARADDDV ARARREAATEIGRVHAEAERVRAELTAETDRLTVALRAAERAAERDAAALRELRADRDHLRADRDRIRDDARRERDELAR AHADAQTETARVRAAAAEDLERERAAATDQLERARTEAASRLAAEQQAAAERLAVLTDARAEARTRAERAERQVDELTAE LRTARAQPPSQPQPSPAGGRPAGEVPVPPGRPAVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46361; Mature: 46230
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSADDPRATPADDDPTTMTGGAQTAAPPSSRCVFPGCERPTAPADRPGRPPSYCEDPAH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH NRLAAYRRRRDLARRESTPPAGGDPAAVRPPVARPIAAGRLRADELAAQIRALAADLTRS HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LDGFSREMAGLGDVARAEAQVEAAEADAAERVAEAVARAVRAEQASRAEQTARGEAEAVA HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH AEAVAALEDAERRLATAEAAHAGAVTDAETARREAAAAVEAARADADARVEQAQARADDD HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHH VARARREAATEIGRVHAEAERVRAELTAETDRLTVALRAAERAAERDAAALRELRADRDH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRADRDRIRDDARRERDELARAHADAQTETARVRAAAAEDLERERAAATDQLERARTEAA HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRLAAEQQAAAERLAVLTDARAEARTRAERAERQVDELTAELRTARAQPPSQPQPSPAGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC RPAGEVPVPPGRPAVE CCCCCCCCCCCCCCCC >Mature Secondary Structure SSADDPRATPADDDPTTMTGGAQTAAPPSSRCVFPGCERPTAPADRPGRPPSYCEDPAH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH NRLAAYRRRRDLARRESTPPAGGDPAAVRPPVARPIAAGRLRADELAAQIRALAADLTRS HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LDGFSREMAGLGDVARAEAQVEAAEADAAERVAEAVARAVRAEQASRAEQTARGEAEAVA HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH AEAVAALEDAERRLATAEAAHAGAVTDAETARREAAAAVEAARADADARVEQAQARADDD HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHH VARARREAATEIGRVHAEAERVRAELTAETDRLTVALRAAERAAERDAAALRELRADRDH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRADRDRIRDDARRERDELARAHADAQTETARVRAAAAEDLERERAAATDQLERARTEAA HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRLAAEQQAAAERLAVLTDARAEARTRAERAERQVDELTAELRTARAQPPSQPQPSPAGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC RPAGEVPVPPGRPAVE CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA