| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315854
Identifier: 158315854
GI number: 158315854
Start: 4850911
End: 4851387
Strand: Reverse
Name: 158315854
Synonym: Franean1_4069
Alternate gene names: NA
Gene position: 4851387-4850911 (Counterclockwise)
Preceding gene: 158315856
Following gene: 158315853
Centisome position: 54.01
GC content: 69.6
Gene sequence:
>477_bases ATGCCGAAGACCATTCCCTGCCTGTGGTTCGACACCGACGCCGAGGAGGCCGCCGCGCTCTACGTCTCCGTCTTCCCGAA CTCGGCCATCACCGGCGTCACCCGTTACGGGCCGGGCATGCACCGACCCGAGGGCCTGGCCCTGACCGTCTCCTTCACCC TCGACGGGCAGGAATACGTCGCGCTCAACGGCGGACCGGAGTTCACCTTCTCCGAGGCGATCTCGTTCCAGATCCCCTGC GCCGACCAGGCCGAGGTGGATCACTACTGGAGCGCCCTCACCGACGGCGGCGGCAAGGAGAGCCAGTGCGGCTGGCTCAC CGACCGTTTCGGCCTGTCCTGGCAGGTCGTCCCGACCCGGCTGACCGAGCTGGTCAGTGACCCCGACCCGGAGCGCGCCC AGCGCGCCACCCAGGCGATGCTCACCATGGGGAAGATCGACATCGCCGCGATCGAGCGCGCCGCCGACGGCCGGTAG
Upstream 100 bases:
>100_bases GAGTTCACGCACGCCCGCCGGTCCTACCACCGGCAGGCCAGACTGCCGGACCCGGGCGTCCACGACCAGTAGGCGTCCAC GACCAGCGGAGGAAACAGCG
Downstream 100 bases:
>100_bases CCGGGCGGCCACGTCGCGGAGCACGCCGGCCGGGTCCCCACAAGGGGACCAAGGTCGGCGGGCCCGGCCACCTTCACCCC CGCGAACAGGCCAGAGGAGA
Product: 3-demethylubiquinone-9 3-methyltransferase
Products: NA
Alternate protein names: 3-Demethylubiquinone-9 3-Methyltransferase Family Protein; 3-Demethylubiquinone-9 3-Methyltransferase Domain Protein; 3-Demethylubiquinone-9 3-O-Methyltransferase; Methyltransferase; Signal Peptide; 3-Demethylubiquinone-93- Methyltransferase Protein; PhnB Protein; 3-Demethylubiquinone-9 3-Methyltransferase Family
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MPKTIPCLWFDTDAEEAAALYVSVFPNSAITGVTRYGPGMHRPEGLALTVSFTLDGQEYVALNGGPEFTFSEAISFQIPC ADQAEVDHYWSALTDGGGKESQCGWLTDRFGLSWQVVPTRLTELVSDPDPERAQRATQAMLTMGKIDIAAIERAADGR
Sequences:
>Translated_158_residues MPKTIPCLWFDTDAEEAAALYVSVFPNSAITGVTRYGPGMHRPEGLALTVSFTLDGQEYVALNGGPEFTFSEAISFQIPC ADQAEVDHYWSALTDGGGKESQCGWLTDRFGLSWQVVPTRLTELVSDPDPERAQRATQAMLTMGKIDIAAIERAADGR >Mature_157_residues PKTIPCLWFDTDAEEAAALYVSVFPNSAITGVTRYGPGMHRPEGLALTVSFTLDGQEYVALNGGPEFTFSEAISFQIPCA DQAEVDHYWSALTDGGGKESQCGWLTDRFGLSWQVVPTRLTELVSDPDPERAQRATQAMLTMGKIDIAAIERAADGR
Specific function: Unknown
COG id: COG3865
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17189; Mature: 17058
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKTIPCLWFDTDAEEAAALYVSVFPNSAITGVTRYGPGMHRPEGLALTVSFTLDGQEYV CCCCEEEEEECCCCCHHEEEEEEECCCCCCCCEECCCCCCCCCCCEEEEEEEEECCCEEE ALNGGPEFTFSEAISFQIPCADQAEVDHYWSALTDGGGKESQCGWLTDRFGLSWQVVPTR EECCCCCEEECCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEEHHHH LTELVSDPDPERAQRATQAMLTMGKIDIAAIERAADGR HHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCC >Mature Secondary Structure PKTIPCLWFDTDAEEAAALYVSVFPNSAITGVTRYGPGMHRPEGLALTVSFTLDGQEYV CCCEEEEEECCCCCHHEEEEEEECCCCCCCCEECCCCCCCCCCCEEEEEEEEECCCEEE ALNGGPEFTFSEAISFQIPCADQAEVDHYWSALTDGGGKESQCGWLTDRFGLSWQVVPTR EECCCCCEEECCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEEHHHH LTELVSDPDPERAQRATQAMLTMGKIDIAAIERAADGR HHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA