| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315827
Identifier: 158315827
GI number: 158315827
Start: 4820443
End: 4821225
Strand: Reverse
Name: 158315827
Synonym: Franean1_4042
Alternate gene names: NA
Gene position: 4821225-4820443 (Counterclockwise)
Preceding gene: 158315828
Following gene: 158315814
Centisome position: 53.68
GC content: 72.8
Gene sequence:
>783_bases ATGACGACCACGCCGGACGACCCGACCACCGCGCTGCCCGGCCGCCCGCCCGTCGTTGACCTAGCCACCTGGCAGACCGC CCGTGACGAGCTCCTGGTCCGCGAGAAGGCCCACACCCGTGAGGGCGACGCCCTCGCCGCGGCCCGCCGCCGGCTGCCGA TGGTGGAGCTCGACGGGACGGTCGAGGTCGTCGGACCCGACGGCCCGGTCCCGTTCCTGGACCTGTTCCAGGGCCGCGAC GAGCTCATGGTCTACAAGCACATGTGGTACGACGGCGCGCCGCACCAGGGGCAGTGCGAGGGCTGCACCACCACGGCCTG GCACCTGAAGGACGCTGTCTACCTCAACGCCCGCGGCGTCTCGTTCGCCATCCTGACCACGGGCCGGTGGGACGAGGTGG CCTCCTACGTCGAGTTCATGGGCTACACCCAGCCCTGGTACTCGGTGCGCGACGTGGACGCGCCGGTCGGCGGCAGCATG GGTTACCTCACCTGCTTCCTGCGCGACGGCGACCGCGTGTTCCTCACCTACTCCACGACGGGCCGTGGCAACGAGCCGGT CAACGGGTCCCTCGGCCTGCTCGACATGACACCCTACGGCCGCGGCGAGGCGTGGGAGGACAACCCCGAGGGCTGGCCCG AGGGGCGCAGCTCGTGCTGGTTCTGGCGCTCGGACGCGGACGGGAACGCCACCTGGGGCCCGACCAGCCGCCCCGTGCCG CAGTGGACCCGCCACGGCGCGACCCCCGTGGAGTCCCTCGGCCGGCACGGCCACCGCCGCTGA
Upstream 100 bases:
>100_bases GGGCCCCCGCCGCGATGAGTTCCGGCCGAGTCGCGGGTCTGTTCTCGTGTCGTAGGACGTCGTACGACGCTGCCCGGCAC GAGACACCATGGAGGACACC
Downstream 100 bases:
>100_bases CGCACCTTCGTCGACGGCATCGGCAAAGTGGTGATCGGGCTGTTGGAACCGGCCGTCTGAGGACCAGAGCGGGCTGCCGG ACACGACCCCGCGCACGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MTTTPDDPTTALPGRPPVVDLATWQTARDELLVREKAHTREGDALAAARRRLPMVELDGTVEVVGPDGPVPFLDLFQGRD ELMVYKHMWYDGAPHQGQCEGCTTTAWHLKDAVYLNARGVSFAILTTGRWDEVASYVEFMGYTQPWYSVRDVDAPVGGSM GYLTCFLRDGDRVFLTYSTTGRGNEPVNGSLGLLDMTPYGRGEAWEDNPEGWPEGRSSCWFWRSDADGNATWGPTSRPVP QWTRHGATPVESLGRHGHRR
Sequences:
>Translated_260_residues MTTTPDDPTTALPGRPPVVDLATWQTARDELLVREKAHTREGDALAAARRRLPMVELDGTVEVVGPDGPVPFLDLFQGRD ELMVYKHMWYDGAPHQGQCEGCTTTAWHLKDAVYLNARGVSFAILTTGRWDEVASYVEFMGYTQPWYSVRDVDAPVGGSM GYLTCFLRDGDRVFLTYSTTGRGNEPVNGSLGLLDMTPYGRGEAWEDNPEGWPEGRSSCWFWRSDADGNATWGPTSRPVP QWTRHGATPVESLGRHGHRR >Mature_259_residues TTTPDDPTTALPGRPPVVDLATWQTARDELLVREKAHTREGDALAAARRRLPMVELDGTVEVVGPDGPVPFLDLFQGRDE LMVYKHMWYDGAPHQGQCEGCTTTAWHLKDAVYLNARGVSFAILTTGRWDEVASYVEFMGYTQPWYSVRDVDAPVGGSMG YLTCFLRDGDRVFLTYSTTGRGNEPVNGSLGLLDMTPYGRGEAWEDNPEGWPEGRSSCWFWRSDADGNATWGPTSRPVPQ WTRHGATPVESLGRHGHRR
Specific function: Unknown
COG id: COG4312
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28945; Mature: 28814
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTPDDPTTALPGRPPVVDLATWQTARDELLVREKAHTREGDALAAARRRLPMVELDGT CCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEECCE VEVVGPDGPVPFLDLFQGRDELMVYKHMWYDGAPHQGQCEGCTTTAWHLKDAVYLNARGV EEEECCCCCCCHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEECCEEEEEECCCC SFAILTTGRWDEVASYVEFMGYTQPWYSVRDVDAPVGGSMGYLTCFLRDGDRVFLTYSTT EEEEEECCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEEEEECCCEEEEEEECC GRGNEPVNGSLGLLDMTPYGRGEAWEDNPEGWPEGRSSCWFWRSDADGNATWGPTSRPVP CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC QWTRHGATPVESLGRHGHRR HHHHCCCCCHHHHHHCCCCC >Mature Secondary Structure TTTPDDPTTALPGRPPVVDLATWQTARDELLVREKAHTREGDALAAARRRLPMVELDGT CCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEECCE VEVVGPDGPVPFLDLFQGRDELMVYKHMWYDGAPHQGQCEGCTTTAWHLKDAVYLNARGV EEEECCCCCCCHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEECCEEEEEECCCC SFAILTTGRWDEVASYVEFMGYTQPWYSVRDVDAPVGGSMGYLTCFLRDGDRVFLTYSTT EEEEEECCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEEEEECCCEEEEEEECC GRGNEPVNGSLGLLDMTPYGRGEAWEDNPEGWPEGRSSCWFWRSDADGNATWGPTSRPVP CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC QWTRHGATPVESLGRHGHRR HHHHCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA