| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315795
Identifier: 158315795
GI number: 158315795
Start: 4789821
End: 4790228
Strand: Reverse
Name: 158315795
Synonym: Franean1_4009
Alternate gene names: NA
Gene position: 4790228-4789821 (Counterclockwise)
Preceding gene: 158315796
Following gene: 158315794
Centisome position: 53.33
GC content: 72.55
Gene sequence:
>408_bases ATGACGACCGCCGGGCGCGGTGACGACCGGCGCCTGCGGCTCGACGCGGACCCGCAGGACGTGGGGCGCGGGCTCGGCCA GCTCGTGGTGGTCGTCCTGGAACTGCTACGCGAGGTGCTGGAACGACAGGCCATCCGCCGGATGGAGGGCGGGGGGCTGA CCGCCACGCAGATCGACGACCTCGGCCACGCGCTGCTGGAGATTCGCGCCAGCCTGGTACAGGTCCGTGAGTCGCTGGGC CTGTCAGCGCAGGAGACCGAAGCCGCCTTCGCTCGTGCCGGCCAGCTCCTGGCCGCGGACGACGACTGGGCCAACGCCAG AACCAGGTCAGCCGTCCCGGAGGCGGGTGAACCCAGGGCAACCGTCCGGAGGCCGGGCCTCCGGGAGAAGGCGAGGACAG CGCCATGA
Upstream 100 bases:
>100_bases TGGTCGTCGCCCTCGCCGGCGTGGACCTCCTGAGGATCGATCTTCGTCTGCTTCTGGTAGGCGTCCAGACCGCACTCGAG GGAACCGGCGAGGTCTGGCC
Downstream 100 bases:
>100_bases CCGTCGCCAGCTATCCCATGGGACGGGCGCCCAGGCCGAGCGGACTCGCCGACGTCCTCGACGTCGTACTTGACAAGGGC ATCGTCATCGACGCCTACGT
Product: gas vesicle K
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MTTAGRGDDRRLRLDADPQDVGRGLGQLVVVVLELLREVLERQAIRRMEGGGLTATQIDDLGHALLEIRASLVQVRESLG LSAQETEAAFARAGQLLAADDDWANARTRSAVPEAGEPRATVRRPGLREKARTAP
Sequences:
>Translated_135_residues MTTAGRGDDRRLRLDADPQDVGRGLGQLVVVVLELLREVLERQAIRRMEGGGLTATQIDDLGHALLEIRASLVQVRESLG LSAQETEAAFARAGQLLAADDDWANARTRSAVPEAGEPRATVRRPGLREKARTAP >Mature_134_residues TTAGRGDDRRLRLDADPQDVGRGLGQLVVVVLELLREVLERQAIRRMEGGGLTATQIDDLGHALLEIRASLVQVRESLGL SAQETEAAFARAGQLLAADDDWANARTRSAVPEAGEPRATVRRPGLREKARTAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14603; Mature: 14472
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAGRGDDRRLRLDADPQDVGRGLGQLVVVVLELLREVLERQAIRRMEGGGLTATQIDD CCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LGHALLEIRASLVQVRESLGLSAQETEAAFARAGQLLAADDDWANARTRSAVPEAGEPRA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCC TVRRPGLREKARTAP HHCCCCCCCCCCCCC >Mature Secondary Structure TTAGRGDDRRLRLDADPQDVGRGLGQLVVVVLELLREVLERQAIRRMEGGGLTATQIDD CCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LGHALLEIRASLVQVRESLGLSAQETEAAFARAGQLLAADDDWANARTRSAVPEAGEPRA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCC TVRRPGLREKARTAP HHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA