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The map label for this gene is gvpA1 [H]

Identifier: 158315794

GI number: 158315794

Start: 4789393

End: 4789824

Strand: Reverse

Name: gvpA1 [H]

Synonym: Franean1_4008

Alternate gene names: 158315794

Gene position: 4789824-4789393 (Counterclockwise)

Preceding gene: 158315795

Following gene: 158315793

Centisome position: 53.33

GC content: 70.83

Gene sequence:

>432_bases
ATGACCGTCGCCAGCTATCCCATGGGACGGGCGCCCAGGCCGAGCGGACTCGCCGACGTCCTCGACGTCGTACTTGACAA
GGGCATCGTCATCGACGCCTACGTGCGCGTCGCCCTGGTGGGCATCGAGATCCTCACCATCGACGCGCGCATCGTGATCG
CCAGCGTCGACACCTACCTCCGGTTCGCCGAAGCCGTGAACCGGCTGGACATCCAGCCCAAAGAACAAGTGGGAGGGCTG
CCGGGGCTCATGCGCGAGGTCACCGAGGGCTCGTCCCGGCACCGCGTCAAGGGAGCCCTGGGCGGGATCAGGGACACCGC
CGAGGACGTCGCCGAGGCGCTGCGCGGATCGTCCTCCTCCGACCAGAACGGGCGCGGGATGCCTGCCGAGCGGGTCGCGC
CCGCCGAGCGCCGCGGCGGCCGGGAGGGGTGA

Upstream 100 bases:

>100_bases
ACTGGGCCAACGCCAGAACCAGGTCAGCCGTCCCGGAGGCGGGTGAACCCAGGGCAACCGTCCGGAGGCCGGGCCTCCGG
GAGAAGGCGAGGACAGCGCC

Downstream 100 bases:

>100_bases
GCCATGCCTGTCGTGCTGTACGGAATCGTCCGGGCAGGCCATCCCCTCCCGGACCCGGACCCGGATCCGGACCCGGACGC
GGCGCTCGGCATCGGCCATC

Product: gas vesicle synthesis-like protein

Products: NA

Alternate protein names: GVP [H]

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MTVASYPMGRAPRPSGLADVLDVVLDKGIVIDAYVRVALVGIEILTIDARIVIASVDTYLRFAEAVNRLDIQPKEQVGGL
PGLMREVTEGSSRHRVKGALGGIRDTAEDVAEALRGSSSSDQNGRGMPAERVAPAERRGGREG

Sequences:

>Translated_143_residues
MTVASYPMGRAPRPSGLADVLDVVLDKGIVIDAYVRVALVGIEILTIDARIVIASVDTYLRFAEAVNRLDIQPKEQVGGL
PGLMREVTEGSSRHRVKGALGGIRDTAEDVAEALRGSSSSDQNGRGMPAERVAPAERRGGREG
>Mature_142_residues
TVASYPMGRAPRPSGLADVLDVVLDKGIVIDAYVRVALVGIEILTIDARIVIASVDTYLRFAEAVNRLDIQPKEQVGGLP
GLMREVTEGSSRHRVKGALGGIRDTAEDVAEALRGSSSSDQNGRGMPAERVAPAERRGGREG

Specific function: Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the st

COG id: NA

COG function: NA

Gene ontology:

Cell location: Vacuole, gas vesicle membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gas vesicle protein type A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000638
- InterPro:   IPR018493 [H]

Pfam domain/function: PF00741 Gas_vesicle [H]

EC number: NA

Molecular weight: Translated: 15181; Mature: 15049

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: PS00234 GAS_VESICLE_A_1 ; PS00669 GAS_VESICLE_A_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVASYPMGRAPRPSGLADVLDVVLDKGIVIDAYVRVALVGIEILTIDARIVIASVDTYL
CCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCEEEEHHHHHHH
RFAEAVNRLDIQPKEQVGGLPGLMREVTEGSSRHRVKGALGGIRDTAEDVAEALRGSSSS
HHHHHHHHCCCCCHHHHCCCHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCC
DQNGRGMPAERVAPAERRGGREG
CCCCCCCCHHHCCCHHHCCCCCC
>Mature Secondary Structure 
TVASYPMGRAPRPSGLADVLDVVLDKGIVIDAYVRVALVGIEILTIDARIVIASVDTYL
CCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCEEEEHHHHHHH
RFAEAVNRLDIQPKEQVGGLPGLMREVTEGSSRHRVKGALGGIRDTAEDVAEALRGSSSS
HHHHHHHHCCCCCHHHHCCCHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCC
DQNGRGMPAERVAPAERRGGREG
CCCCCCCCHHHCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]