| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315768
Identifier: 158315768
GI number: 158315768
Start: 4766794
End: 4767045
Strand: Reverse
Name: 158315768
Synonym: Franean1_3980
Alternate gene names: NA
Gene position: 4767045-4766794 (Counterclockwise)
Preceding gene: 158315769
Following gene: 158315767
Centisome position: 53.07
GC content: 65.08
Gene sequence:
>252_bases ATGCTCACCGGTCGTCACGGGGAGCGGCTCAACGGGTGGATCGCCGCCGTCGACGCCGATGACCTGTCCGAACTTCACCG CTTCACCCGCGGGCTCCTGCGCGACCACGACGCCGTCCTCAACGGGCTGACCCTGCCGCACAGCTCCGGACAGGTCGAAG GCACCGTGAACCGCATCAAAATGATCAAGCGGCAGATGTATGGCCGGGCGAACTTCGACCTGCTCCGCAAACGAGTTCTC CTCGCGACCTGA
Upstream 100 bases:
>100_bases CCGAGCACCTGGATGAACAGGACACCCTCGCGTTACAGCAGGTCCTCACCGCTGCCAGGACCTCCGGAAGACCGCTGGCC ATGTCACCGCGTTCGCGCAG
Downstream 100 bases:
>100_bases CGGCGCCCGGGTCCACTTCGATCACAAGATCAGGGACAGATCCCACATTCAGCCGTCGTTGACAGATGGGATGTCGTGGC CGTCGAGCGTGACGTGACCA
Product: putative transposase
Products: NA
Alternate protein names: IS6 Family Transposase; Insertion Element; Transposase For Insertion Sequence Element; Transposase Of ISMdi2 ISL3 Family; IS Transposase
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MLTGRHGERLNGWIAAVDADDLSELHRFTRGLLRDHDAVLNGLTLPHSSGQVEGTVNRIKMIKRQMYGRANFDLLRKRVL LAT
Sequences:
>Translated_83_residues MLTGRHGERLNGWIAAVDADDLSELHRFTRGLLRDHDAVLNGLTLPHSSGQVEGTVNRIKMIKRQMYGRANFDLLRKRVL LAT >Mature_83_residues MLTGRHGERLNGWIAAVDADDLSELHRFTRGLLRDHDAVLNGLTLPHSSGQVEGTVNRIKMIKRQMYGRANFDLLRKRVL LAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9394; Mature: 9394
Theoretical pI: Translated: 10.99; Mature: 10.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTGRHGERLNGWIAAVDADDLSELHRFTRGLLRDHDAVLNGLTLPHSSGQVEGTVNRIK CCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH MIKRQMYGRANFDLLRKRVLLAT HHHHHHCCCCCHHHHHHHHHHCC >Mature Secondary Structure MLTGRHGERLNGWIAAVDADDLSELHRFTRGLLRDHDAVLNGLTLPHSSGQVEGTVNRIK CCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH MIKRQMYGRANFDLLRKRVLLAT HHHHHHCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA