| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158315767
Identifier: 158315767
GI number: 158315767
Start: 4765455
End: 4766675
Strand: Reverse
Name: 158315767
Synonym: Franean1_3979
Alternate gene names: NA
Gene position: 4766675-4765455 (Counterclockwise)
Preceding gene: 158315768
Following gene: 158315765
Centisome position: 53.07
GC content: 64.13
Gene sequence:
>1221_bases GTGGATCTCCCGCTGGCTGCCGGGCCTGGCGCCGAGAGACGGGAGAGACCTGGTGCTGTTCGTCGGGACGACTGGGCGGA GGACCACCACGACGTGGATGTGCAGGACGAGACAGGCAGGCGGCTGACGAAGGCCCGGCTGCCCGAGGGCACGGCCGGGA TCGCCCGGCTGCACACGCTGCCCTCCGCCGGAGCGGTATCCCGTCCACTCCCGGGGATCTCGCCTTCGAGCGGCTCACCC CGACCGGCATGGCGATCACCGCCGCCACCTGCCAGGCGCCCTGTCCCAAGGCAGTTGACCTCATCGACCGATGTGGACGC GTCGACCTGCCTATATTATGAGTATGTGACCCGATCTGTACCGGAAAAGACGCTAGAGCATTGGGCCAGCCAGTACATCA CATACCGGTACAGGTCGAAGGCCGCCCTCTGGTGGCCCGCGAGGGGGGAGGACATCCAGTTCGGTCGACTTCCGTCAAGA CCCGGAAAGATCGTACAGATCGAGCTGAAGACCACTGAAGTCGTCCGTCGCGGCGTCCACGAGGTGGAGGTCGACCTCGG ACAGCTCTGGGAGTATCGGCGTCTACCGTTGGGAAAGCAACCATTCTACGCCTTCCCCCGGCCGGGTGCCGACTGGCCCG GAGATCTCGGCGAGGCCGCCGCCAAGACAGGCCGTGCCGTCTCCGAACTCGGATACCGCAGGGGTAAGGAATTGTGGTTC GCGAACTGGATGGTCGTGATGACCACCGAGCAGGTCGCGGACGTCATGAGCAAGGAGCTTGCACTGCACGGTTCGGAGAA ACGAGGCGAGCGGCGGCCGCTGGTGCGTTTCGCCGGCAAATCCGAACCGAGATGGGGACTTGAAGCGGCCGATCCGGAGG TGATCCGCTGGCGAGACTTCTGGTCGATTCTCGACCGGTGCGGTCGGGATCGCTGGCCACAGTTGATTCGCCTGCCCGCC GTCTTCCTTGACATCCGCGACGGTCGGGAGCTTTCCGGCGGTCGAGAGGTCTACACTCGTCAGCAGCTCAGGGAGCTTCT GGACGGCGCGGCAGGGGCGCAGGGAGATGTCGGGCACCTGGTGATTCTCGAACCCAATCCTGATGGTCACTACCGACGTT CAGATTTCTTGAACAGCAACTCTGCCAGAGTAGGTGCAGCTCCCAGTAGAGGCGATACCGAGCAAAACGACCATCGTGCG GTCGTCTCGCTTGATGCTTGA
Upstream 100 bases:
>100_bases CGATCACAAGATCAGGGACAGATCCCACATTCAGCCGTCGTTGACAGATGGGATGTCGTGGCCGTCGAGCGTGACGTGAC CACTTGGCCATTAGGGCGTG
Downstream 100 bases:
>100_bases ATCTCCACGATGCATCGCCAACGCGATGTCGATACCGCCGGCATTTGCTGCTTCCTCGCGGCGGCTACGGTTGGGGAGCG CTACCCGTTCGCCGGTCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MDLPLAAGPGAERRERPGAVRRDDWAEDHHDVDVQDETGRRLTKARLPEGTAGIARLHTLPSAGAVSRPLPGISPSSGSP RPAWRSPPPPARRPVPRQLTSSTDVDASTCLYYEYVTRSVPEKTLEHWASQYITYRYRSKAALWWPARGEDIQFGRLPSR PGKIVQIELKTTEVVRRGVHEVEVDLGQLWEYRRLPLGKQPFYAFPRPGADWPGDLGEAAAKTGRAVSELGYRRGKELWF ANWMVVMTTEQVADVMSKELALHGSEKRGERRPLVRFAGKSEPRWGLEAADPEVIRWRDFWSILDRCGRDRWPQLIRLPA VFLDIRDGRELSGGREVYTRQQLRELLDGAAGAQGDVGHLVILEPNPDGHYRRSDFLNSNSARVGAAPSRGDTEQNDHRA VVSLDA
Sequences:
>Translated_406_residues MDLPLAAGPGAERRERPGAVRRDDWAEDHHDVDVQDETGRRLTKARLPEGTAGIARLHTLPSAGAVSRPLPGISPSSGSP RPAWRSPPPPARRPVPRQLTSSTDVDASTCLYYEYVTRSVPEKTLEHWASQYITYRYRSKAALWWPARGEDIQFGRLPSR PGKIVQIELKTTEVVRRGVHEVEVDLGQLWEYRRLPLGKQPFYAFPRPGADWPGDLGEAAAKTGRAVSELGYRRGKELWF ANWMVVMTTEQVADVMSKELALHGSEKRGERRPLVRFAGKSEPRWGLEAADPEVIRWRDFWSILDRCGRDRWPQLIRLPA VFLDIRDGRELSGGREVYTRQQLRELLDGAAGAQGDVGHLVILEPNPDGHYRRSDFLNSNSARVGAAPSRGDTEQNDHRA VVSLDA >Mature_406_residues MDLPLAAGPGAERRERPGAVRRDDWAEDHHDVDVQDETGRRLTKARLPEGTAGIARLHTLPSAGAVSRPLPGISPSSGSP RPAWRSPPPPARRPVPRQLTSSTDVDASTCLYYEYVTRSVPEKTLEHWASQYITYRYRSKAALWWPARGEDIQFGRLPSR PGKIVQIELKTTEVVRRGVHEVEVDLGQLWEYRRLPLGKQPFYAFPRPGADWPGDLGEAAAKTGRAVSELGYRRGKELWF ANWMVVMTTEQVADVMSKELALHGSEKRGERRPLVRFAGKSEPRWGLEAADPEVIRWRDFWSILDRCGRDRWPQLIRLPA VFLDIRDGRELSGGREVYTRQQLRELLDGAAGAQGDVGHLVILEPNPDGHYRRSDFLNSNSARVGAAPSRGDTEQNDHRA VVSLDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45634; Mature: 45634
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLPLAAGPGAERRERPGAVRRDDWAEDHHDVDVQDETGRRLTKARLPEGTAGIARLHTL CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHCCCCCCHHHHHHHCC PSAGAVSRPLPGISPSSGSPRPAWRSPPPPARRPVPRQLTSSTDVDASTCLYYEYVTRSV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHC PEKTLEHWASQYITYRYRSKAALWWPARGEDIQFGRLPSRPGKIVQIELKTTEVVRRGVH CHHHHHHHHHHHEEEEECCCEEEEECCCCCCEEECCCCCCCCCEEEEEECHHHHHHCCHH EVEVDLGQLWEYRRLPLGKQPFYAFPRPGADWPGDLGEAAAKTGRAVSELGYRRGKELWF HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEE ANWMVVMTTEQVADVMSKELALHGSEKRGERRPLVRFAGKSEPRWGLEAADPEVIRWRDF ECEEEEEEHHHHHHHHHHHHHHCCCHHCCCCCCHHEECCCCCCCCCCCCCCCCEEHHHHH WSILDRCGRDRWPQLIRLPAVFLDIRDGRELSGGREVYTRQQLRELLDGAAGAQGDVGHL HHHHHHHCCCCCHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEE VILEPNPDGHYRRSDFLNSNSARVGAAPSRGDTEQNDHRAVVSLDA EEECCCCCCCCCHHHHCCCCCCEECCCCCCCCCCCCCCEEEEEECC >Mature Secondary Structure MDLPLAAGPGAERRERPGAVRRDDWAEDHHDVDVQDETGRRLTKARLPEGTAGIARLHTL CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHCCCCCCHHHHHHHCC PSAGAVSRPLPGISPSSGSPRPAWRSPPPPARRPVPRQLTSSTDVDASTCLYYEYVTRSV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHC PEKTLEHWASQYITYRYRSKAALWWPARGEDIQFGRLPSRPGKIVQIELKTTEVVRRGVH CHHHHHHHHHHHEEEEECCCEEEEECCCCCCEEECCCCCCCCCEEEEEECHHHHHHCCHH EVEVDLGQLWEYRRLPLGKQPFYAFPRPGADWPGDLGEAAAKTGRAVSELGYRRGKELWF HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEE ANWMVVMTTEQVADVMSKELALHGSEKRGERRPLVRFAGKSEPRWGLEAADPEVIRWRDF ECEEEEEEHHHHHHHHHHHHHHCCCHHCCCCCCHHEECCCCCCCCCCCCCCCCEEHHHHH WSILDRCGRDRWPQLIRLPAVFLDIRDGRELSGGREVYTRQQLRELLDGAAGAQGDVGHL HHHHHHHCCCCCHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEE VILEPNPDGHYRRSDFLNSNSARVGAAPSRGDTEQNDHRAVVSLDA EEECCCCCCCCCHHHHCCCCCCEECCCCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA