Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158315767

Identifier: 158315767

GI number: 158315767

Start: 4765455

End: 4766675

Strand: Reverse

Name: 158315767

Synonym: Franean1_3979

Alternate gene names: NA

Gene position: 4766675-4765455 (Counterclockwise)

Preceding gene: 158315768

Following gene: 158315765

Centisome position: 53.07

GC content: 64.13

Gene sequence:

>1221_bases
GTGGATCTCCCGCTGGCTGCCGGGCCTGGCGCCGAGAGACGGGAGAGACCTGGTGCTGTTCGTCGGGACGACTGGGCGGA
GGACCACCACGACGTGGATGTGCAGGACGAGACAGGCAGGCGGCTGACGAAGGCCCGGCTGCCCGAGGGCACGGCCGGGA
TCGCCCGGCTGCACACGCTGCCCTCCGCCGGAGCGGTATCCCGTCCACTCCCGGGGATCTCGCCTTCGAGCGGCTCACCC
CGACCGGCATGGCGATCACCGCCGCCACCTGCCAGGCGCCCTGTCCCAAGGCAGTTGACCTCATCGACCGATGTGGACGC
GTCGACCTGCCTATATTATGAGTATGTGACCCGATCTGTACCGGAAAAGACGCTAGAGCATTGGGCCAGCCAGTACATCA
CATACCGGTACAGGTCGAAGGCCGCCCTCTGGTGGCCCGCGAGGGGGGAGGACATCCAGTTCGGTCGACTTCCGTCAAGA
CCCGGAAAGATCGTACAGATCGAGCTGAAGACCACTGAAGTCGTCCGTCGCGGCGTCCACGAGGTGGAGGTCGACCTCGG
ACAGCTCTGGGAGTATCGGCGTCTACCGTTGGGAAAGCAACCATTCTACGCCTTCCCCCGGCCGGGTGCCGACTGGCCCG
GAGATCTCGGCGAGGCCGCCGCCAAGACAGGCCGTGCCGTCTCCGAACTCGGATACCGCAGGGGTAAGGAATTGTGGTTC
GCGAACTGGATGGTCGTGATGACCACCGAGCAGGTCGCGGACGTCATGAGCAAGGAGCTTGCACTGCACGGTTCGGAGAA
ACGAGGCGAGCGGCGGCCGCTGGTGCGTTTCGCCGGCAAATCCGAACCGAGATGGGGACTTGAAGCGGCCGATCCGGAGG
TGATCCGCTGGCGAGACTTCTGGTCGATTCTCGACCGGTGCGGTCGGGATCGCTGGCCACAGTTGATTCGCCTGCCCGCC
GTCTTCCTTGACATCCGCGACGGTCGGGAGCTTTCCGGCGGTCGAGAGGTCTACACTCGTCAGCAGCTCAGGGAGCTTCT
GGACGGCGCGGCAGGGGCGCAGGGAGATGTCGGGCACCTGGTGATTCTCGAACCCAATCCTGATGGTCACTACCGACGTT
CAGATTTCTTGAACAGCAACTCTGCCAGAGTAGGTGCAGCTCCCAGTAGAGGCGATACCGAGCAAAACGACCATCGTGCG
GTCGTCTCGCTTGATGCTTGA

Upstream 100 bases:

>100_bases
CGATCACAAGATCAGGGACAGATCCCACATTCAGCCGTCGTTGACAGATGGGATGTCGTGGCCGTCGAGCGTGACGTGAC
CACTTGGCCATTAGGGCGTG

Downstream 100 bases:

>100_bases
ATCTCCACGATGCATCGCCAACGCGATGTCGATACCGCCGGCATTTGCTGCTTCCTCGCGGCGGCTACGGTTGGGGAGCG
CTACCCGTTCGCCGGTCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MDLPLAAGPGAERRERPGAVRRDDWAEDHHDVDVQDETGRRLTKARLPEGTAGIARLHTLPSAGAVSRPLPGISPSSGSP
RPAWRSPPPPARRPVPRQLTSSTDVDASTCLYYEYVTRSVPEKTLEHWASQYITYRYRSKAALWWPARGEDIQFGRLPSR
PGKIVQIELKTTEVVRRGVHEVEVDLGQLWEYRRLPLGKQPFYAFPRPGADWPGDLGEAAAKTGRAVSELGYRRGKELWF
ANWMVVMTTEQVADVMSKELALHGSEKRGERRPLVRFAGKSEPRWGLEAADPEVIRWRDFWSILDRCGRDRWPQLIRLPA
VFLDIRDGRELSGGREVYTRQQLRELLDGAAGAQGDVGHLVILEPNPDGHYRRSDFLNSNSARVGAAPSRGDTEQNDHRA
VVSLDA

Sequences:

>Translated_406_residues
MDLPLAAGPGAERRERPGAVRRDDWAEDHHDVDVQDETGRRLTKARLPEGTAGIARLHTLPSAGAVSRPLPGISPSSGSP
RPAWRSPPPPARRPVPRQLTSSTDVDASTCLYYEYVTRSVPEKTLEHWASQYITYRYRSKAALWWPARGEDIQFGRLPSR
PGKIVQIELKTTEVVRRGVHEVEVDLGQLWEYRRLPLGKQPFYAFPRPGADWPGDLGEAAAKTGRAVSELGYRRGKELWF
ANWMVVMTTEQVADVMSKELALHGSEKRGERRPLVRFAGKSEPRWGLEAADPEVIRWRDFWSILDRCGRDRWPQLIRLPA
VFLDIRDGRELSGGREVYTRQQLRELLDGAAGAQGDVGHLVILEPNPDGHYRRSDFLNSNSARVGAAPSRGDTEQNDHRA
VVSLDA
>Mature_406_residues
MDLPLAAGPGAERRERPGAVRRDDWAEDHHDVDVQDETGRRLTKARLPEGTAGIARLHTLPSAGAVSRPLPGISPSSGSP
RPAWRSPPPPARRPVPRQLTSSTDVDASTCLYYEYVTRSVPEKTLEHWASQYITYRYRSKAALWWPARGEDIQFGRLPSR
PGKIVQIELKTTEVVRRGVHEVEVDLGQLWEYRRLPLGKQPFYAFPRPGADWPGDLGEAAAKTGRAVSELGYRRGKELWF
ANWMVVMTTEQVADVMSKELALHGSEKRGERRPLVRFAGKSEPRWGLEAADPEVIRWRDFWSILDRCGRDRWPQLIRLPA
VFLDIRDGRELSGGREVYTRQQLRELLDGAAGAQGDVGHLVILEPNPDGHYRRSDFLNSNSARVGAAPSRGDTEQNDHRA
VVSLDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45634; Mature: 45634

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLPLAAGPGAERRERPGAVRRDDWAEDHHDVDVQDETGRRLTKARLPEGTAGIARLHTL
CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHCCCCCCHHHHHHHCC
PSAGAVSRPLPGISPSSGSPRPAWRSPPPPARRPVPRQLTSSTDVDASTCLYYEYVTRSV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHC
PEKTLEHWASQYITYRYRSKAALWWPARGEDIQFGRLPSRPGKIVQIELKTTEVVRRGVH
CHHHHHHHHHHHEEEEECCCEEEEECCCCCCEEECCCCCCCCCEEEEEECHHHHHHCCHH
EVEVDLGQLWEYRRLPLGKQPFYAFPRPGADWPGDLGEAAAKTGRAVSELGYRRGKELWF
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEE
ANWMVVMTTEQVADVMSKELALHGSEKRGERRPLVRFAGKSEPRWGLEAADPEVIRWRDF
ECEEEEEEHHHHHHHHHHHHHHCCCHHCCCCCCHHEECCCCCCCCCCCCCCCCEEHHHHH
WSILDRCGRDRWPQLIRLPAVFLDIRDGRELSGGREVYTRQQLRELLDGAAGAQGDVGHL
HHHHHHHCCCCCHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEE
VILEPNPDGHYRRSDFLNSNSARVGAAPSRGDTEQNDHRAVVSLDA
EEECCCCCCCCCHHHHCCCCCCEECCCCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MDLPLAAGPGAERRERPGAVRRDDWAEDHHDVDVQDETGRRLTKARLPEGTAGIARLHTL
CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHCCCCCCHHHHHHHCC
PSAGAVSRPLPGISPSSGSPRPAWRSPPPPARRPVPRQLTSSTDVDASTCLYYEYVTRSV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHC
PEKTLEHWASQYITYRYRSKAALWWPARGEDIQFGRLPSRPGKIVQIELKTTEVVRRGVH
CHHHHHHHHHHHEEEEECCCEEEEECCCCCCEEECCCCCCCCCEEEEEECHHHHHHCCHH
EVEVDLGQLWEYRRLPLGKQPFYAFPRPGADWPGDLGEAAAKTGRAVSELGYRRGKELWF
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEE
ANWMVVMTTEQVADVMSKELALHGSEKRGERRPLVRFAGKSEPRWGLEAADPEVIRWRDF
ECEEEEEEHHHHHHHHHHHHHHCCCHHCCCCCCHHEECCCCCCCCCCCCCCCCEEHHHHH
WSILDRCGRDRWPQLIRLPAVFLDIRDGRELSGGREVYTRQQLRELLDGAAGAQGDVGHL
HHHHHHHCCCCCHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEE
VILEPNPDGHYRRSDFLNSNSARVGAAPSRGDTEQNDHRAVVSLDA
EEECCCCCCCCCHHHHCCCCCCEECCCCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA