| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315764
Identifier: 158315764
GI number: 158315764
Start: 4761380
End: 4762663
Strand: Reverse
Name: 158315764
Synonym: Franean1_3976
Alternate gene names: NA
Gene position: 4762663-4761380 (Counterclockwise)
Preceding gene: 158315765
Following gene: 158315763
Centisome position: 53.02
GC content: 74.38
Gene sequence:
>1284_bases GTGACCACCCAGCGCCGCAACATCCCGCGCGGGTCGCGTCCCGGGTCGTCGTCGACAGCGGTCATCGACGCACTTGACGC GCAGCGCGCCGCCGAGCGCCGCCGGGCCATGCGCGCGATCCTGCGCCGCCCGCTGCTCGTCGCGCACGGTCCCGACGCCG ACGCCTTCCGCCTCGTCCGCCGGCACCAGACGTGGCTGCGGGACTGGTTCACCCGAGAGACGGGCTGGTCGCTGCGGGTC GACCCGGAGGTGGCCCGACTGGCCAAGATCCCGGCCGACCTGACCGACGGCACCCGCCCGGCCACGGCAGGATCGGCCCA GCAGCCGTTCGGCCGCCGCCGCTACGTCCTGCTCTGCCTGGCCCTGGCCGGCCTGGAACGGGCCGACAACCAGATCACCC TGGGCAGCCTGGCCGACGACGTGATGATGGGCTGCGCCGCCCCTGAGCTCGCCGAGGCGGGCGTCAGCTTCAGCCTCGAC AGCCGGGACGAGCGCGCCGACCTGGTGGCGGCCGTCCGCGTTCTCCTTGACCTCGGTGTGCTGCGCCGGGTCGCCGGTGA CGAGACGACCTTCACCACCGGCACCGGCGACGCCCTCTACGACCTCGACCGCCGGGCGCTGGCCGGCATGCTGGTGACCC GGCGCGGCCCCTCGACAGTCCGCGACATCCCAGGCCCGGCCGATGTGGAAGGCCGGCTGGCCGCCGTCGTCGAGGAACTG ACGGCCGACACCGACGACGCGCGCAACCTGGCCCGTCGCCACGCGCTGACCCGGCGCCTGCTGGACGACCCGGTCGTCTA CTACGTGGATCTGGACGAGGGCGAGCGGGCCTACCTGACCAGCCAGCGGGCCGTGCTGACCCGGCGGATCACCGAGGCGA CGGGCCTGGTCGCAGAGGTCCGCGCGGAGGGGATCGCGATGGTCGACCCCGACGGCGACCTCACCGACACCCGAATGCCC GAGGACGGCACCGATGGCCACGCCACCCTCCTGCTCGCCGAGCATCTCGCCCGCGAGGGCACCCGTCTCGGCCCAGGTGA GCCGATAGCTGTCGCCGACCTCGACGCCCACATGCGCGAGCTGATCGCCCAGCACCAGAAGCACTGGCGCAAGGGCGTCA CCGAGCCCGACGCGGAGGCCGAGCTGGTCGACCGGGCGCTGTCGCGGATGCGAGCCCTCGGCCTGCTGCGCCGGCGCGGG GACGACGTGTTCGCCCTGCCGGCGCTCGCCCGGTTCGCGCTCGGCGATCTGCGGGACGGCGGCGGCCAGGAGTCACTGGC ATGA
Upstream 100 bases:
>100_bases ACGGTGTGATCGCGACCGTGCCCACCAGCGCGGGCCTGTTCACCGGCCCCGACCATCTCCTGGAGATCCACGACTTGCTG ACAGCGACGGCGGTGACGGC
Downstream 100 bases:
>100_bases CGGAGCCGACGACCGAACGCTGGCAGCCGCTGCGCGCCGGGCTGGTCGACGTCTTCCTCTACGACGAGGAGGAATTCCAC TTCCACGAGGGCAACCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 427; Mature: 426
Protein sequence:
>427_residues MTTQRRNIPRGSRPGSSSTAVIDALDAQRAAERRRAMRAILRRPLLVAHGPDADAFRLVRRHQTWLRDWFTRETGWSLRV DPEVARLAKIPADLTDGTRPATAGSAQQPFGRRRYVLLCLALAGLERADNQITLGSLADDVMMGCAAPELAEAGVSFSLD SRDERADLVAAVRVLLDLGVLRRVAGDETTFTTGTGDALYDLDRRALAGMLVTRRGPSTVRDIPGPADVEGRLAAVVEEL TADTDDARNLARRHALTRRLLDDPVVYYVDLDEGERAYLTSQRAVLTRRITEATGLVAEVRAEGIAMVDPDGDLTDTRMP EDGTDGHATLLLAEHLAREGTRLGPGEPIAVADLDAHMRELIAQHQKHWRKGVTEPDAEAELVDRALSRMRALGLLRRRG DDVFALPALARFALGDLRDGGGQESLA
Sequences:
>Translated_427_residues MTTQRRNIPRGSRPGSSSTAVIDALDAQRAAERRRAMRAILRRPLLVAHGPDADAFRLVRRHQTWLRDWFTRETGWSLRV DPEVARLAKIPADLTDGTRPATAGSAQQPFGRRRYVLLCLALAGLERADNQITLGSLADDVMMGCAAPELAEAGVSFSLD SRDERADLVAAVRVLLDLGVLRRVAGDETTFTTGTGDALYDLDRRALAGMLVTRRGPSTVRDIPGPADVEGRLAAVVEEL TADTDDARNLARRHALTRRLLDDPVVYYVDLDEGERAYLTSQRAVLTRRITEATGLVAEVRAEGIAMVDPDGDLTDTRMP EDGTDGHATLLLAEHLAREGTRLGPGEPIAVADLDAHMRELIAQHQKHWRKGVTEPDAEAELVDRALSRMRALGLLRRRG DDVFALPALARFALGDLRDGGGQESLA >Mature_426_residues TTQRRNIPRGSRPGSSSTAVIDALDAQRAAERRRAMRAILRRPLLVAHGPDADAFRLVRRHQTWLRDWFTRETGWSLRVD PEVARLAKIPADLTDGTRPATAGSAQQPFGRRRYVLLCLALAGLERADNQITLGSLADDVMMGCAAPELAEAGVSFSLDS RDERADLVAAVRVLLDLGVLRRVAGDETTFTTGTGDALYDLDRRALAGMLVTRRGPSTVRDIPGPADVEGRLAAVVEELT ADTDDARNLARRHALTRRLLDDPVVYYVDLDEGERAYLTSQRAVLTRRITEATGLVAEVRAEGIAMVDPDGDLTDTRMPE DGTDGHATLLLAEHLAREGTRLGPGEPIAVADLDAHMRELIAQHQKHWRKGVTEPDAEAELVDRALSRMRALGLLRRRGD DVFALPALARFALGDLRDGGGQESLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46655; Mature: 46524
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQRRNIPRGSRPGSSSTAVIDALDAQRAAERRRAMRAILRRPLLVAHGPDADAFRLVR CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHH RHQTWLRDWFTRETGWSLRVDPEVARLAKIPADLTDGTRPATAGSAQQPFGRRRYVLLCL HHHHHHHHHHHHCCCCEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH ALAGLERADNQITLGSLADDVMMGCAAPELAEAGVSFSLDSRDERADLVAAVRVLLDLGV HHHHHHHCCCEEEHHHHHHHHHHHCCCHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHH LRRVAGDETTFTTGTGDALYDLDRRALAGMLVTRRGPSTVRDIPGPADVEGRLAAVVEEL HHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHH TADTDDARNLARRHALTRRLLDDPVVYYVDLDEGERAYLTSQRAVLTRRITEATGLVAEV HCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RAEGIAMVDPDGDLTDTRMPEDGTDGHATLLLAEHLAREGTRLGPGEPIAVADLDAHMRE HHCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHH LIAQHQKHWRKGVTEPDAEAELVDRALSRMRALGLLRRRGDDVFALPALARFALGDLRDG HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCC GGQESLA CCCCCCC >Mature Secondary Structure TTQRRNIPRGSRPGSSSTAVIDALDAQRAAERRRAMRAILRRPLLVAHGPDADAFRLVR CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHH RHQTWLRDWFTRETGWSLRVDPEVARLAKIPADLTDGTRPATAGSAQQPFGRRRYVLLCL HHHHHHHHHHHHCCCCEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH ALAGLERADNQITLGSLADDVMMGCAAPELAEAGVSFSLDSRDERADLVAAVRVLLDLGV HHHHHHHCCCEEEHHHHHHHHHHHCCCHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHH LRRVAGDETTFTTGTGDALYDLDRRALAGMLVTRRGPSTVRDIPGPADVEGRLAAVVEEL HHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHH TADTDDARNLARRHALTRRLLDDPVVYYVDLDEGERAYLTSQRAVLTRRITEATGLVAEV HCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RAEGIAMVDPDGDLTDTRMPEDGTDGHATLLLAEHLAREGTRLGPGEPIAVADLDAHMRE HHCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHH LIAQHQKHWRKGVTEPDAEAELVDRALSRMRALGLLRRRGDDVFALPALARFALGDLRDG HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCC GGQESLA CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA