Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158315765

Identifier: 158315765

GI number: 158315765

Start: 4762660

End: 4764357

Strand: Reverse

Name: 158315765

Synonym: Franean1_3977

Alternate gene names: NA

Gene position: 4764357-4762660 (Counterclockwise)

Preceding gene: 158315767

Following gene: 158315764

Centisome position: 53.04

GC content: 72.91

Gene sequence:

>1698_bases
GTGGCGGGGGTCGCGGCGTCGGAGCGGGCAGGGGGCCGCGACCGGCCCGCGAACGTCTCTCGGTTCGGGCCCTTCGCCCA
TGTGACAGTGGAGAAGGCCCCGCTGTACCGCGCCATCATGCGCACGTTCGTCCGGGCGAAGCGCAGGTTCAACGTCCACC
TGCGCCCCGAGGACGTCCTGGAAATGCTCGCCCGCGAGCCGGGCCAGGACGGGGACGGGCTGGACGGCCTGGACCTCGGC
GGCATCACGGATGTGAGCGCCGAGCTACGCAGCCTGGTCGACTGGGGCAACCTGCGCGGCGATCCGGACACGAGCCGGGT
CACCTCCGTCGAGGACTTCAACCGCCCCCGATTCCTCTACCAGCTCACGCCCGCCGGCGAGGCCACCGAGACCGCGCTGG
AGGCTTTTGACGAGGCGTTGGGCCGGCGCGGGGAGCTGCAGGCCGTCGCCCTGTCCGACATCCACAGCCAGCTGCGGGCG
CTGCTAGCCCTGCTGCCGGAACCGGAGATCGATGCGGCGAAGGCGCACCAGCTGCTGCGTGACCTGGCCGGGGTCTTTCG
CGGGCTGGCGGACAACGCCCAGGCGTTCATGGGGTCGCTGCAGCGCACCATCGATCTGCACGACGCCGACCTCGACGTCT
TCCTGGCCTACAAGGAACAGCTCATCGACTATCTCCAGCGGTTCATCCGCGACCTCGTCGTCACCTCGGCGCGGATCGTC
GACGTCCTGCGGGAGATCGAGGAGCACGACCTGTCCCGCCTGCTGCGGGCGGTCGCCGAGCGCGAGGCCCGCGACGCGGC
ACCCGACCTCGACCACCCGCCCCCGCCGACACCGTCGCAGCCGGCTCTGACGTCGCAGCCGGAGCTGACGCAGGGGGAGC
CGGCCGAGCCGCTGGCGAGCGGGGTCGTCGGCGATCGGCTGGCGTTGTGGACGGAGCGGTGGGAGGGGTTACGGCACTGG
TTCGTCGGCGATCGGACGCATCCGCCTCAGTCACGCCTCCTGCGGGAGCGGGCTCGGGCCGCCGTGCCGGCGCTGCTGTC
GGTGGTGCTGGTCCTCAACGAGCGCAGGTCGGGGCGCAGCGACCGGTCGGCGGACTTCCGTGCGCTCGCGCTCTGGTTCG
CGCAGGCCCCGAACGACGACGACGCCCACCGGCTATGGCGGGTGTGCTTCGGGCTTGCTCCGGCCCGCCACCTCACGGTC
GACGCGGCGACCGTGGAGGCCCGTGACGCCGAGCCGGTGCCGGCGTCGACGCCGTGGAGCGAGGCGCCTCCGATTCTCGT
CGACATCCGGCTGCGGCGCACCGGGCGGTACGAACGCCGGGGCGCACCCAACCGCGTCCGCGACCGCGCGGCCGAGCGCC
GGCTGCTGGCCGAGAGACTGGCGGCCGAGGAGGATGTGGTGCGGGCCGCGCGCCGCCAGCTCGCCACCGGCGAACCCGTG
CGCCTGTCCGAGCTGGCCGAGCTCGACGACCCGACCTTCCGACTGTTCCTGACCGTCCTCGGGGACGCCCTCGCCCGCCG
CCGGCCGGGGGAACTGAGCGTCGTGACCAGCAGCGCCGACGGCACTCTGTCCATCTCGCTCACGCCCACCGACGACGGTG
TGATCGCGACCGTGCCCACCAGCGCGGGCCTGTTCACCGGCCCCGACCATCTCCTGGAGATCCACGACTTGCTGACAGCG
ACGGCGGTGACGGCGTGA

Upstream 100 bases:

>100_bases
GCGTACGCTGGGTGTCCATCTGTGGACCCGTCGGAAACATGTCGGGGTGGGCGTGGTGCGACGGGGTGAACGCTGACAGG
CAGCCGGGAGGTTGATGCGG

Downstream 100 bases:

>100_bases
CCACCCAGCGCCGCAACATCCCGCGCGGGTCGCGTCCCGGGTCGTCGTCGACAGCGGTCATCGACGCACTTGACGCGCAG
CGCGCCGCCGAGCGCCGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 565; Mature: 564

Protein sequence:

>565_residues
MAGVAASERAGGRDRPANVSRFGPFAHVTVEKAPLYRAIMRTFVRAKRRFNVHLRPEDVLEMLAREPGQDGDGLDGLDLG
GITDVSAELRSLVDWGNLRGDPDTSRVTSVEDFNRPRFLYQLTPAGEATETALEAFDEALGRRGELQAVALSDIHSQLRA
LLALLPEPEIDAAKAHQLLRDLAGVFRGLADNAQAFMGSLQRTIDLHDADLDVFLAYKEQLIDYLQRFIRDLVVTSARIV
DVLREIEEHDLSRLLRAVAEREARDAAPDLDHPPPPTPSQPALTSQPELTQGEPAEPLASGVVGDRLALWTERWEGLRHW
FVGDRTHPPQSRLLRERARAAVPALLSVVLVLNERRSGRSDRSADFRALALWFAQAPNDDDAHRLWRVCFGLAPARHLTV
DAATVEARDAEPVPASTPWSEAPPILVDIRLRRTGRYERRGAPNRVRDRAAERRLLAERLAAEEDVVRAARRQLATGEPV
RLSELAELDDPTFRLFLTVLGDALARRRPGELSVVTSSADGTLSISLTPTDDGVIATVPTSAGLFTGPDHLLEIHDLLTA
TAVTA

Sequences:

>Translated_565_residues
MAGVAASERAGGRDRPANVSRFGPFAHVTVEKAPLYRAIMRTFVRAKRRFNVHLRPEDVLEMLAREPGQDGDGLDGLDLG
GITDVSAELRSLVDWGNLRGDPDTSRVTSVEDFNRPRFLYQLTPAGEATETALEAFDEALGRRGELQAVALSDIHSQLRA
LLALLPEPEIDAAKAHQLLRDLAGVFRGLADNAQAFMGSLQRTIDLHDADLDVFLAYKEQLIDYLQRFIRDLVVTSARIV
DVLREIEEHDLSRLLRAVAEREARDAAPDLDHPPPPTPSQPALTSQPELTQGEPAEPLASGVVGDRLALWTERWEGLRHW
FVGDRTHPPQSRLLRERARAAVPALLSVVLVLNERRSGRSDRSADFRALALWFAQAPNDDDAHRLWRVCFGLAPARHLTV
DAATVEARDAEPVPASTPWSEAPPILVDIRLRRTGRYERRGAPNRVRDRAAERRLLAERLAAEEDVVRAARRQLATGEPV
RLSELAELDDPTFRLFLTVLGDALARRRPGELSVVTSSADGTLSISLTPTDDGVIATVPTSAGLFTGPDHLLEIHDLLTA
TAVTA
>Mature_564_residues
AGVAASERAGGRDRPANVSRFGPFAHVTVEKAPLYRAIMRTFVRAKRRFNVHLRPEDVLEMLAREPGQDGDGLDGLDLGG
ITDVSAELRSLVDWGNLRGDPDTSRVTSVEDFNRPRFLYQLTPAGEATETALEAFDEALGRRGELQAVALSDIHSQLRAL
LALLPEPEIDAAKAHQLLRDLAGVFRGLADNAQAFMGSLQRTIDLHDADLDVFLAYKEQLIDYLQRFIRDLVVTSARIVD
VLREIEEHDLSRLLRAVAEREARDAAPDLDHPPPPTPSQPALTSQPELTQGEPAEPLASGVVGDRLALWTERWEGLRHWF
VGDRTHPPQSRLLRERARAAVPALLSVVLVLNERRSGRSDRSADFRALALWFAQAPNDDDAHRLWRVCFGLAPARHLTVD
AATVEARDAEPVPASTPWSEAPPILVDIRLRRTGRYERRGAPNRVRDRAAERRLLAERLAAEEDVVRAARRQLATGEPVR
LSELAELDDPTFRLFLTVLGDALARRRPGELSVVTSSADGTLSISLTPTDDGVIATVPTSAGLFTGPDHLLEIHDLLTAT
AVTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62257; Mature: 62126

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGVAASERAGGRDRPANVSRFGPFAHVTVEKAPLYRAIMRTFVRAKRRFNVHLRPEDVL
CCCCCCCCCCCCCCCCCCCHHCCCEEEEEECHHHHHHHHHHHHHHHHHHCCEEECHHHHH
EMLAREPGQDGDGLDGLDLGGITDVSAELRSLVDWGNLRGDPDTSRVTSVEDFNRPRFLY
HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHCCCHHHCCCCEEEE
QLTPAGEATETALEAFDEALGRRGELQAVALSDIHSQLRALLALLPEPEIDAAKAHQLLR
EECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
DLAGVFRGLADNAQAFMGSLQRTIDLHDADLDVFLAYKEQLIDYLQRFIRDLVVTSARIV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVLREIEEHDLSRLLRAVAEREARDAAPDLDHPPPPTPSQPALTSQPELTQGEPAEPLAS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
GVVGDRLALWTERWEGLRHWFVGDRTHPPQSRLLRERARAAVPALLSVVLVLNERRSGRS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DRSADFRALALWFAQAPNDDDAHRLWRVCFGLAPARHLTVDAATVEARDAEPVPASTPWS
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHEEEEHHEEECCCCCCCCCCCCCC
EAPPILVDIRLRRTGRYERRGAPNRVRDRAAERRLLAERLAAEEDVVRAARRQLATGEPV
CCCCEEEEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RLSELAELDDPTFRLFLTVLGDALARRRPGELSVVTSSADGTLSISLTPTDDGVIATVPT
CHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCCEEEECCC
SAGLFTGPDHLLEIHDLLTATAVTA
CCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AGVAASERAGGRDRPANVSRFGPFAHVTVEKAPLYRAIMRTFVRAKRRFNVHLRPEDVL
CCCCCCCCCCCCCCCCCCHHCCCEEEEEECHHHHHHHHHHHHHHHHHHCCEEECHHHHH
EMLAREPGQDGDGLDGLDLGGITDVSAELRSLVDWGNLRGDPDTSRVTSVEDFNRPRFLY
HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHCCCHHHCCCCEEEE
QLTPAGEATETALEAFDEALGRRGELQAVALSDIHSQLRALLALLPEPEIDAAKAHQLLR
EECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
DLAGVFRGLADNAQAFMGSLQRTIDLHDADLDVFLAYKEQLIDYLQRFIRDLVVTSARIV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVLREIEEHDLSRLLRAVAEREARDAAPDLDHPPPPTPSQPALTSQPELTQGEPAEPLAS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
GVVGDRLALWTERWEGLRHWFVGDRTHPPQSRLLRERARAAVPALLSVVLVLNERRSGRS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DRSADFRALALWFAQAPNDDDAHRLWRVCFGLAPARHLTVDAATVEARDAEPVPASTPWS
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHEEEEHHEEECCCCCCCCCCCCCC
EAPPILVDIRLRRTGRYERRGAPNRVRDRAAERRLLAERLAAEEDVVRAARRQLATGEPV
CCCCEEEEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RLSELAELDDPTFRLFLTVLGDALARRRPGELSVVTSSADGTLSISLTPTDDGVIATVPT
CHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCCEEEECCC
SAGLFTGPDHLLEIHDLLTATAVTA
CCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA