| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is cypA [H]
Identifier: 158315752
GI number: 158315752
Start: 4746122
End: 4747393
Strand: Reverse
Name: cypA [H]
Synonym: Franean1_3964
Alternate gene names: 158315752
Gene position: 4747393-4746122 (Counterclockwise)
Preceding gene: 158315762
Following gene: 158315751
Centisome position: 52.85
GC content: 72.8
Gene sequence:
>1272_bases ATGACCACGTCCACCGTCGTCCCGACGGCCGGCACCGGATCATCCGGGCCGGCCGGCGAGGAGTCGACCGCGCTGCTGGC CGAGCTGTTCGACCCGGCAACGAGACCCGACCCCTACCCCGTCTACAGCCGGCTGCGCGAGGCGGGTGCGCTGCACGCGA CGCCGTTCGGGCTGCCCGTCGCGACCCGGCACGCCGACTGCGTGGCCGTCCTGGCGAACCAGGACTGGGGGCACGACCTG GAAGCCCACCAGATGCACCCGACGCTGCCGGCGGAGTCGTTCCCCACCACGTTCCTGTGGATGGAGCCGCCGGACCACAC CCGGCTGCGCGGCCTGGTCAGCAAGGGCTTCACCCCGCGCAGCGTGCAGCTGCTGCGGCCGCGGATCACCGCGCTGGTCG ACGAGCTCCTCGACAATGCGCTCGCCGCCGGCGAGTTCGACCTCGTCGAGACGATCGCCTACCCACTGCCGCTGACCGTC ATCTGCGAGATCCTCGGCGTCCCCGCCGCCGACCACCCGGCCGTCCAGGTCTGGTCGCAGGCGCTGGCCCGGGCGTTCGA CCCCGACGCGCTCATGTCGCCCGAGGCACTCGCGGAGCGCAACCGGGCCATCCCCGAGTTCCTGGAGTACTTCGGCGCGC TGGTCGAGCGGCACCGGCGCGAGCCAGGCGACAACCTGATCTCCGCCCTCGCCCAGGTCGAGGAGGCCGGTGACCGGCTC ACCGCCGACGAGCTGCTCGGCACCTGCGTCACGCTGATCATCGCCGGCCACGAGACGACGGTGAACCTGGTCGGCAACGG GATGCTCGCGCTGCTGCGCAACCCCGACCAGCTCGCCCTACTGCGCGCCGAGCCCGAACTGATCCCGGCCGCCGTCGAGG AGCTGCTGCGCTACGACTCACCGATCCACCTCAACACCCGCGCGGCGAAGCGGGAGCTCGAGGTGGCCGGACGGGTGTTC GCGCCCGGCGAGGGCGTCGTCGCCCTGATCGCCTGCGCGAACCGGGACCCGCGGGCCTACCCCGACCCGGACCGGCTCGA CGTGCGGCGGTTCACCTCCTCCGCCGGCGGCCCCCCGGCCCGGCACCTGTCGTTCAGCCTCGGCCACCACTACTGCCTAG GCGCGCCGCTGGCGCTGCTCGAGATGGAGCTGCTACTCGCCGCGTTCGTCCGGCGGGTCAGCCACGCCGAGATCACCGAC AACAACCCGCCCTACAAGCCGAACCTGCTGATCAGGGGCCTGGCCGAGCTGCCCGTGCGGTTCCGCGGCTGA
Upstream 100 bases:
>100_bases ATCCATCGGCGGCGTTAATCGTCTCGCCGGGGACAGAAGGAAAGCGGACGATACATCGAGGCGCTATCGCGGTAACAACC GTGCGGCAATTGGAGATGCG
Downstream 100 bases:
>100_bases CCGTCCCGCCACGCTGCCCGGCATGATCCACGACGACATGCCACGTTCCCGTTCCGCCGTCCACACGTGCGCGTTACCGG CGGTTAGCGCCCACCGGTAA
Product: cytochrome P450
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 423; Mature: 422
Protein sequence:
>423_residues MTTSTVVPTAGTGSSGPAGEESTALLAELFDPATRPDPYPVYSRLREAGALHATPFGLPVATRHADCVAVLANQDWGHDL EAHQMHPTLPAESFPTTFLWMEPPDHTRLRGLVSKGFTPRSVQLLRPRITALVDELLDNALAAGEFDLVETIAYPLPLTV ICEILGVPAADHPAVQVWSQALARAFDPDALMSPEALAERNRAIPEFLEYFGALVERHRREPGDNLISALAQVEEAGDRL TADELLGTCVTLIIAGHETTVNLVGNGMLALLRNPDQLALLRAEPELIPAAVEELLRYDSPIHLNTRAAKRELEVAGRVF APGEGVVALIACANRDPRAYPDPDRLDVRRFTSSAGGPPARHLSFSLGHHYCLGAPLALLEMELLLAAFVRRVSHAEITD NNPPYKPNLLIRGLAELPVRFRG
Sequences:
>Translated_423_residues MTTSTVVPTAGTGSSGPAGEESTALLAELFDPATRPDPYPVYSRLREAGALHATPFGLPVATRHADCVAVLANQDWGHDL EAHQMHPTLPAESFPTTFLWMEPPDHTRLRGLVSKGFTPRSVQLLRPRITALVDELLDNALAAGEFDLVETIAYPLPLTV ICEILGVPAADHPAVQVWSQALARAFDPDALMSPEALAERNRAIPEFLEYFGALVERHRREPGDNLISALAQVEEAGDRL TADELLGTCVTLIIAGHETTVNLVGNGMLALLRNPDQLALLRAEPELIPAAVEELLRYDSPIHLNTRAAKRELEVAGRVF APGEGVVALIACANRDPRAYPDPDRLDVRRFTSSAGGPPARHLSFSLGHHYCLGAPLALLEMELLLAAFVRRVSHAEITD NNPPYKPNLLIRGLAELPVRFRG >Mature_422_residues TTSTVVPTAGTGSSGPAGEESTALLAELFDPATRPDPYPVYSRLREAGALHATPFGLPVATRHADCVAVLANQDWGHDLE AHQMHPTLPAESFPTTFLWMEPPDHTRLRGLVSKGFTPRSVQLLRPRITALVDELLDNALAAGEFDLVETIAYPLPLTVI CEILGVPAADHPAVQVWSQALARAFDPDALMSPEALAERNRAIPEFLEYFGALVERHRREPGDNLISALAQVEEAGDRLT ADELLGTCVTLIIAGHETTVNLVGNGMLALLRNPDQLALLRAEPELIPAAVEELLRYDSPIHLNTRAAKRELEVAGRVFA PGEGVVALIACANRDPRAYPDPDRLDVRRFTSSAGGPPARHLSFSLGHHYCLGAPLALLEMELLLAAFVRRVSHAEITDN NPPYKPNLLIRGLAELPVRFRG
Specific function: Unknown
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
Organism=Homo sapiens, GI195972896, Length=168, Percent_Identity=30.952380952381, Blast_Score=66, Evalue=8e-11, Organism=Homo sapiens, GI195972898, Length=168, Percent_Identity=30.952380952381, Blast_Score=66, Evalue=8e-11, Organism=Homo sapiens, GI261278370, Length=168, Percent_Identity=30.952380952381, Blast_Score=65, Evalue=9e-11, Organism=Drosophila melanogaster, GI24642101, Length=181, Percent_Identity=29.2817679558011, Blast_Score=72, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 45890; Mature: 45759
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSTVVPTAGTGSSGPAGEESTALLAELFDPATRPDPYPVYSRLREAGALHATPFGLPV CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC ATRHADCVAVLANQDWGHDLEAHQMHPTLPAESFPTTFLWMEPPDHTRLRGLVSKGFTPR CCCCCCEEEEEECCCCCCCCCHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCC SVQLLRPRITALVDELLDNALAAGEFDLVETIAYPLPLTVICEILGVPAADHPAVQVWSQ HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHH ALARAFDPDALMSPEALAERNRAIPEFLEYFGALVERHRREPGDNLISALAQVEEAGDRL HHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC TADELLGTCVTLIIAGHETTVNLVGNGMLALLRNPDQLALLRAEPELIPAAVEELLRYDS CHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHCCC PIHLNTRAAKRELEVAGRVFAPGEGVVALIACANRDPRAYPDPDRLDVRRFTSSAGGPPA CEEECHHHHHHHHHHHCCEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCH RHLSFSLGHHYCLGAPLALLEMELLLAAFVRRVSHAEITDNNPPYKPNLLIRGLAELPVR HHHEECCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCC FRG CCC >Mature Secondary Structure TTSTVVPTAGTGSSGPAGEESTALLAELFDPATRPDPYPVYSRLREAGALHATPFGLPV CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC ATRHADCVAVLANQDWGHDLEAHQMHPTLPAESFPTTFLWMEPPDHTRLRGLVSKGFTPR CCCCCCEEEEEECCCCCCCCCHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCC SVQLLRPRITALVDELLDNALAAGEFDLVETIAYPLPLTVICEILGVPAADHPAVQVWSQ HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHH ALARAFDPDALMSPEALAERNRAIPEFLEYFGALVERHRREPGDNLISALAQVEEAGDRL HHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC TADELLGTCVTLIIAGHETTVNLVGNGMLALLRNPDQLALLRAEPELIPAAVEELLRYDS CHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHCCC PIHLNTRAAKRELEVAGRVFAPGEGVVALIACANRDPRAYPDPDRLDVRRFTSSAGGPPA CEEECHHHHHHHHHHHCCEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCH RHLSFSLGHHYCLGAPLALLEMELLLAAFVRRVSHAEITDNNPPYKPNLLIRGLAELPVR HHHEECCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCC FRG CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9287000; 9308178; 9384377 [H]