| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is mhpC [C]
Identifier: 158315722
GI number: 158315722
Start: 4703307
End: 4704173
Strand: Reverse
Name: mhpC [C]
Synonym: Franean1_3934
Alternate gene names: 158315722
Gene position: 4704173-4703307 (Counterclockwise)
Preceding gene: 158315724
Following gene: 158315718
Centisome position: 52.37
GC content: 74.28
Gene sequence:
>867_bases GTGGTGACATACGCGAACGTCAACGGCCTGCGCATCGGCTACGACCTGATCGGCGACGGCGGGCGGACCTGGGTGCTCAC CCCGGGCGGCCGCTTCACCAGGCAGACCCCCGGGCTGCCGGAGCTCGCCCGCGCCCTCGCCGCGCAGGGCGACCGGGTGC TGCTGTGGGACCGCCCGAACACCGGCGAGTCCGACGTCTGCCTCGCAGGCCCGAGCGAGCCGCGGATGCAGGCCGACGCC CTCGCCGCGCTCCTGACGGAGCTCGACCTCGGGCCGGCGGTGCTTGCCGGCGCCACGGTCGGCTCGCACGTCTCGCTGCT CACCGCCGTGCACCACCCCGAGGTCGTCGCCGGCCTGTCCCTGTGGTGGATCAGCGGCGGCGTCATGGGCCTCATGATCC TCGCGAACGTCTACTACACACCGGCCATCACGGCCGCGTGGACGACCGGCATGGAGGCGGTGGCGGCGCTGCCCGACTGG GCCCCGCTGCTCGACCAGAACGAGCGGAACCGCCGCCACGTCCTCGAACAGGACAGGGAGGCCTTCCTCGCCACCATGCA ACAGTGGATGGCCGCCTACTGCCCACGGCCGGGCGAGCAGGTGCCGGGCCTGCCGGACGAGCTCGCGCGAGCCATCACCG CCCCCGCACTCGTCTTCCGCGGCGGCGCGAGCGATCCCTTCCACCCGCGGGCGACGTCGGAGGCGCTGGCCGGCCTGCTG CCGAACGCCCGGCTGGTCGAGCCACCCTGGGGGGACCGTGAGTACCTCGACCGCCAGGCCGAACGGGAGAGCGCCGGTGG CCTGTTCGTCCGCTGGCCGCTGCTGGCCACGGCGATGCGGGAGTGGGCCGGCGAGACGCTCGCCTGA
Upstream 100 bases:
>100_bases GAATGATCAGCCTCGCACGGCCGCCGCCGGCGCGGCCCGGAGTGGACGGGGCCGGCGAGGCGATCGGTTTATCCGGCTGG GCGCCGCCACTACTGTCCGG
Downstream 100 bases:
>100_bases CTCCGGGCCTGGGCCGGGGGTCAGGACATCGCGGCCTCGTCGGGGATCCAGAGGATGTTGCGGGCCCGGAGCAGGTCGAC GACGCGCTCACCGTGCTGCT
Product: hypothetical protein
Products: 2-oxopent-4-enoate; succinate [C]
Alternate protein names: None
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MVTYANVNGLRIGYDLIGDGGRTWVLTPGGRFTRQTPGLPELARALAAQGDRVLLWDRPNTGESDVCLAGPSEPRMQADA LAALLTELDLGPAVLAGATVGSHVSLLTAVHHPEVVAGLSLWWISGGVMGLMILANVYYTPAITAAWTTGMEAVAALPDW APLLDQNERNRRHVLEQDREAFLATMQQWMAAYCPRPGEQVPGLPDELARAITAPALVFRGGASDPFHPRATSEALAGLL PNARLVEPPWGDREYLDRQAERESAGGLFVRWPLLATAMREWAGETLA
Sequences:
>Translated_288_residues MVTYANVNGLRIGYDLIGDGGRTWVLTPGGRFTRQTPGLPELARALAAQGDRVLLWDRPNTGESDVCLAGPSEPRMQADA LAALLTELDLGPAVLAGATVGSHVSLLTAVHHPEVVAGLSLWWISGGVMGLMILANVYYTPAITAAWTTGMEAVAALPDW APLLDQNERNRRHVLEQDREAFLATMQQWMAAYCPRPGEQVPGLPDELARAITAPALVFRGGASDPFHPRATSEALAGLL PNARLVEPPWGDREYLDRQAERESAGGLFVRWPLLATAMREWAGETLA >Mature_288_residues MVTYANVNGLRIGYDLIGDGGRTWVLTPGGRFTRQTPGLPELARALAAQGDRVLLWDRPNTGESDVCLAGPSEPRMQADA LAALLTELDLGPAVLAGATVGSHVSLLTAVHHPEVVAGLSLWWISGGVMGLMILANVYYTPAITAAWTTGMEAVAALPDW APLLDQNERNRRHVLEQDREAFLATMQQWMAAYCPRPGEQVPGLPDELARAITAPALVFRGGASDPFHPRATSEALAGLL PNARLVEPPWGDREYLDRQAERESAGGLFVRWPLLATAMREWAGETLA
Specific function: 3-hydroxyphenylpropionate degradation. [C]
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.7.1.- [C]
Molecular weight: Translated: 31046; Mature: 31046
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTYANVNGLRIGYDLIGDGGRTWVLTPGGRFTRQTPGLPELARALAAQGDRVLLWDRPN CEEEECCCCEEEEHEEECCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCC TGESDVCLAGPSEPRMQADALAALLTELDLGPAVLAGATVGSHVSLLTAVHHPEVVAGLS CCCCCEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHCCCHHHHHHH LWWISGGVMGLMILANVYYTPAITAAWTTGMEAVAALPDWAPLLDQNERNRRHVLEQDRE HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHH AFLATMQQWMAAYCPRPGEQVPGLPDELARAITAPALVFRGGASDPFHPRATSEALAGLL HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHC PNARLVEPPWGDREYLDRQAERESAGGLFVRWPLLATAMREWAGETLA CCCEEECCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCCC >Mature Secondary Structure MVTYANVNGLRIGYDLIGDGGRTWVLTPGGRFTRQTPGLPELARALAAQGDRVLLWDRPN CEEEECCCCEEEEHEEECCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCC TGESDVCLAGPSEPRMQADALAALLTELDLGPAVLAGATVGSHVSLLTAVHHPEVVAGLS CCCCCEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHCCCHHHHHHH LWWISGGVMGLMILANVYYTPAITAAWTTGMEAVAALPDWAPLLDQNERNRRHVLEQDRE HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHH AFLATMQQWMAAYCPRPGEQVPGLPDELARAITAPALVFRGGASDPFHPRATSEALAGLL HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHC PNARLVEPPWGDREYLDRQAERESAGGLFVRWPLLATAMREWAGETLA CCCEEECCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-hydroxy-6-ketononadienedicarboxylate; H2O [C]
Specific reaction: 2-hydroxy-6-ketononadienedicarboxylate + H2O = 2-oxopent-4-enoate + succinate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA